Bioinformática
Biología Molecular, Biología Celular y Bioquímica de Parásitos
Microbiología Ambiental
Número de registros: 1
  • Vencidos
  • genómica y transcriptómica del isópodo parásito cymothoa exigua, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2017 - 2019

  • Doctorado, Ciencias Bioquímicas, IBT-UNAM (2007) con especialidad en Bioinformática

  • Licenciatura, Investigación Biomédica Básica, IIB-UNAM (2001)

  • Estancia Temporal
2 - Flores Rodriguez, Ramon Arnulfo (2017). Identificacion asistida por computadora de dominios funcionales y su evolucion en proteinas. FES Acatlan, Licenciatura en Matematicas Aplicadas y Computacion, UNAM. *
Total de publicaciones: 91
  • Tipo
  • Fecha
Open Access Artículo
3 - Boukadida,C., Taboada,B., Escalera-Zamudio,M., Isa,P., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Rincon-Rubio,A., Matias-Florentino,M., Paz-Juarez,H.E., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Hernandez-Rivas,L., Lopez,S., Lopez-Martinez,I, Avila-Rios,S., Arias,C.F. (2022). Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum, 10 (1), e01249-21.
Open Access Artículo
5 - Arevalos-Sanchez,M.M., Maynez-Perez,A.O., Rodriguez-Almeida,F.A., Martinez-Quintana,J.A., Sanchez-Flores,F.A., Felix-Portillo,M., Chavez-Martinez,A., Olvera-Garcia,M.E., Ruiz-Barrera,O., Corral-Luna,A. (2021). In vitro assessment of two novel Cellulases from Trabulsiella odontotermitis for agricultural waste utilization. BMC Biotechnology, 21 (1), 26.
Open Access Artículo
6 - Barona-Gomez,F., Delaye,L., Diaz-Valenzuela,E., Plisson,F., Cruz-Perez,A., Diaz-Sanchez,M., Garcia-Sepulveda,C.A., Sanchez-Flores,A., Perez-Abreu,R., Valencia-Valdespino,F.J., Vega-Megana,N., Munoz-Valle,J.F., Garcia-Gonzalez,O.P., Bernal-Silva,S., Comas-Garcia,A., Cibrian-Jaramillo,A. (2021). Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics, 7 (11), 000684.
Open Access Artículo
7 - Escobar-Zepeda,A., Rosas-Escobar,P., Marquez-Valdelamar,L., de la Torre,P., Partida-Martinez,L.P., Remegaldo,R., Sanchez-Flores,A., Vergara,F. (2021). Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. BMC Research Notes, 14 (1), 333.
in press
8 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C. (2021). Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, Jan 4 [Online ahead of print].
Artículo
9 - Mora-Gonzalez,P.C., Espinosa-Luna,G., Ramirez-Higuera,A., Pena-Montes,C., Valerio-Alfaro,G., Sanchez-Flores,A, Quintana-Castro,R., Sanchez-Otero,M.G., Oliart-Ros,R.M. (2021). Metagenomic Approach to Bacterial Diversity and Lipolytic Enzyme's Genes from a Steam Soil of Los Humeros Geothermal Field (Puebla, México). Geomicrobiology Journal, 38 (4), 304-314.
Open Access artículo
10 - Orta,A.H., Bush,S.J., Gutierrez-Mariscal,M., Castro-Obregon,S., Jaimes-Hoy,L., Grande,R., Vazquez,G., Gorostieta-Salas,E, Martinez-Pacheco,M., Diaz-Barba,K., Cornejo-Paramo,P., Sanchez,A., Tzekely,T., Urrutia,A.O., Cortez,D. (2021). Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology, 4, 1418.
Artículo
11 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E. (2021). Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology, 166, 3173-3177.
Open Access Artículo
12 - Taboada-Ramirez,B., Zarate,S., Isa,P., Boukadida,C., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramirez-Gonzalez,J.E., Comas-Garcia,A., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Verleyen,J., Barrera-Badillo,G., Hernandez-Rivas,L., Mejia-Nepomuceno,F., Martinez-Orozco,J.A., Becerril-Vargas,E., Lopez,S., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F. (2021). Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses, 13 (11), 2161.
Artículo
13 - Valencia-Morales,M.D.P., Sanchez-Flores,A., Colin-Castelan,D., Alvarado-Caudillo,Y., Fragoso-Bargas,N., Lopez-Gonzalez,G., Pena-Lopez,T., Ramirez-Nava,M., de la Rocha,C., Rodriguez-Rios,D., Lund,G., Zaina,S. (2021). Somatic genetic mosaicism in the apolipoprotein E-null mouse aorta. Thrombosis and Haemostasis, 121 (11), 1541-1553.
Open Access Artículo
15 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S. (2020). Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
Artículo
17 - Hernandez-Valle,J., Sanchez-Flores,A., Poggio,S., Dreyfus,G., Camarena,L. (2020). The CtrA regulon of Rhodobacter sphaeroides favors adaptation to a particular life style. Journal of Bacteriology, 202 (7), 00678-19.
Open Access Artículo
18 - Nabor-Romero,O., Rojas-Martinez,R.I., Ochoa-Martinez,D.L., Vega-Arreguin,J., Sanchez-Flores,F.A., Zavaleta-Mejia,E (2020). Avances en el conocimiento sobre el rompimiento de la resistencia de chile cm-334 (capsicum annuum l.) A phytophthora capsici por nacobbus aberrans. Nematropica, 50 (1), 45-58.
Artículo
22 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez A., Garces-Ayala F., Gonzalez-Bonilla,C.R., Grajales-Muniz C., Borja-Aburto,V, Barrera-Badillo G., Lopez,S., Hernandez-Rivas L., Perez-Padilla,R., Lopez-Martinez,I, Avila-Rios,S., Ruiz-Palacios,G., Ramirez-Gonzalez,J.E., Arias,C.F. (2020). Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology, 94 (18), e01056-20.
Artículo
24 - Garcia-Lopez,G., Avila-Gonzalez,D., Garcia-Castro,I.L., Flores-Herrera,H., Molina-Hernandez,A., Portillo,W., Diaz-Martinez,N.E., Sanchez-Flores,A., Verleyen,J., Merchant-Larios,H., Diaz,N.F. (2019). Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research, 375 (1), 31-41.
Open Access Artículo
25 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
27 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S. (2019). De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
Artículo
28 - Barreto-Curiel, F., Ramirez-Puebla, S. T., Ringo, E., Escobar-Zepeda, A., Godoy-Lozano, E., Vazquez-Duhalt, R., Sanchez-Flores, A., Viana, M. T. (2018). Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi. Animal Feed Science and Technology, 245, 91-103.
Artículo
29 - Carrillo-Tapia, E., Garcia-Garcia, E., Herrera-Gonzalez, N.E., Yamazaki-Nakashimada, M.A., Staines-Boone, A.T., Segura-Mendez, N.H., Scheffler-Mendoza, S.C., Farrill-Romanillos, O., Gonzalez-Serrano, M.E., Rodriguez-Alba, J.C., Santos-Argumedo, L., Berron-Ruiz, L., Sanchez-Flores, A., Lopez-Herrera, G. (2018). Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology, 14 (1), 83-93.
Open Access Artículo
30 - Contreras-Castro, L., Maldonado, L.A., Quintana, E.T., Raggi, L., Sanchez-Flores, A. (2018). Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Microbiology Resource Announcements, 6 (21), e00436-18.
Artículo
32 - Garcia, C.F., Pedrini, N., Sanchez-Paz, A., Reyna-Blanco, C.S., Lavarias, S., Muhlia-Almazan, A., Fernandez-Gimenez, A., Laino, A., de-la-Re-Vega, E., Lukaszewicz, G., Lopez-Zavala, A.A., Brieba, L.G., Criscitello, M.F., Carrasco-Miranda, J.S., Garcia-Orozco, K.D., Ochoa-Leyva, A., Rudino-Pinera, E., Sanchez-Flores, A., Sotelo-Mundo, R.R. (2018). De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics, 37, 74-81.
Artículo
Open Access Artículo
35 - Munoz-Medina,J.E., Garcia-Knight,M.A., Sanchez-Flores,A., Monroy-Munoz,I.E., Grande,R., Esbjornsson,J., Santacruz-Tinoco,C.E., Gonzalez-Bonilla,C.R. (2018). Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. PLoS ONE, 13 (12), e0209292.
Artículo
36 - Olvera-Garcia, M., Sanchez-Flores, A., Quirasco, Baruch M. (2018). Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology, 102 (5), 102490, 2251-2267.
Artículo
37 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M. (2018). Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.
Open Access Artículo
38 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A. (2017). Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.
Open Access Artículo
40 - Sandoval-Azuara, S.E., Perea-Jacobo, R., Muniz-Salazar, R., Robbe-Austerman, S., Perera-Ortiz, A., Lopez-Valencia, G., Bravo, D.M., Sanchez-Flores, A., Miranda-Guzman, D., Flores-Lopez, C.A., Zenteno-Cuevas, R., Laniado-Laborin, R., Lafarga de la, Cruz F., Stuber, T.P. (2017). Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases, 63, 48-56.
Open Access Artículo
41 - Titulaer, M., Melgoza-Castillo, A., Panjabi, A.O., Sanchez-Flores, A., Martinez-Guerrero, J.H., Macias-Duarte, A., Fernandez, J.A. (2017). Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. PLoS ONE, 12 (12), e0189695.
Open Access Artículo
Artículo
44 - Hunt,V.L., Tsai,I.J., Coghlan,A., Reid,A.J., Holroyd,N., Foth,B.J., Tracey,A., Cotton,J.A., Stanley,E.J., Beasley,H., Bennett,H.M., Brooks,K., Harsha,B., Kajitani,R., Kulkarni,A., Harbecke,D., Nagayasu,E., Nichol,S., Ogura,Y., Quail,M.A., Randle,N., Xia,D., Brattig,N.W., Soblik,H., Ribeiro,D.M., Sanchez-Flores,A., Hayashi,T., Itoh,T., Denver,D.R., Grant,W., Stoltzfus,J.D., Lok,J.B., Murayama,H., Wastling,J., Streit,A., Kikuchi,T., Viney,M., Berriman,M. (2016). The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48, 299-307.
Open Access Artículo
45 - Ramirez-Puebla,S.T., Ormeno-Orrillo,E., Vera-Ponce de Leon A., Lozano,L., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E. (2016). Genomes of Candidatus Wolbachia bourtzisii wDacA and Candidatus Wolbachia pipientis wDacB from the Cochineal Insect Dactylopius coccus (Hemiptera: Dactylopiidae). G3: Genes, Genomes, Genetics, 6 (10), 3343-3349.
Open Access Artículo
46 - Rodriguez-Anaya,L.Z., Ibarra-Gamez,J.C., Lares-Villa,F., Casillas-Hernandez,R., Sanchez-Flores,A., Gonzalez-Galaviz,J.R. (2016). Analysis of repeated compound units in ORF94 of white spot syndrome virus isolated from Litopenaeus vannamei from outbreak and non-outbreak shrimp farms in Sonora, Mexico. Latin American Journal of Aquatic Research, 44 (4), 850-854.
Open Access Artículo
47 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A. (2016). Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
48 - Sanchez-Flores,A., Penazola,F., Carpinteyro-Ponce,J., Nazario-Yepiz,N., Abreu-Goodger,C., Machado,C.A., Markow,T.A. (2016). Genome Evolution in Three Species of Cactophilic Drosophila. G3: Genes, Genomes, Genetics, 6 (10), 3097-3105.
Open Access Artículo
49 - Vera-Ponce De Leon,A., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E. (2016). Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology, 7, 954.
Open Access Artículo
51 - Dautt-Castro,M., Ochoa-Leyva,A., Contreras-Vergara,C.A., Pacheco-Sanchez,M.A., Casas-Flores,S., Sanchez-Flores,A., Kuhn,D.N., Islas-Osuna,M.A. (2015). Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science, 6.
Open Access Artículo
53 - Fontes-Perez,H., Olvera-Garcia,M., Chavez-Martinez,A., Rodriguez-Almeida,F.A., Arzola-Alvarez,C.A., Sanchez-Flores,A., Corral-Luna,A. (2015). Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements, 3 (6), art. no. e0129015.
Artículo
54 - Glover,L., Alsford,S., Baker,N., Turner,D.J., Sanchez-Flores,A., Hutchinson,S., Hertz-Fowler,C., Berriman,M., Horn,D. (2015). Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols, 10 (1), 106-133.
Open Access Artículo
55 - Gomez-Angulo,J., Vega-Alvarado,L., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Arrizon,J., Sanchez-Flores,A. (2015). Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements, 3 (4).
Open Access Artículo
56 - Olvera-Garcia,M., Fontes-Perez,H., Chavez-Martinez,A., Ruiz-Barrera O., Rodriguez-Almeida,F.A., Sanchez-Flores,A., Corral-Luna,A. (2015). Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements, 3 (6), art. no. e0128915.
Open Access Artículo
57 - Valencia-Morales,Mdel P., Zaina,S., Heyn,H., Carmona,F.J., Varol,N., Sayols,S., Condom,E., Ramirez-Ruz,J., Gomez,A., Moran,S., Lund,G., Rodriguez-Rios,D., Lopez-Gonzalez,G., Ramirez-Nava,M., de la Rocha C., Sanchez-Flores,A., Esteller,M. (2015). The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. BMC Medical Genomics, 8 (1), 85.
Open Access Artículo
58 - Vega-Alvarado,L., Gomez-Angulo,J., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Sanchez-Flores,A., Arrizon,J. (2015). High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements, 3 (3).
Open Access Artículo
59 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D. (2015). Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Artículo
60 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E. (2014). High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Open Access Artículo
61 - Ghaffari,N., Sanchez-Flores,A., Doan,R., Garcia-Orozco,K.D., Chen,P.L., Ochoa-Leyva,A., Lopez-Zavala,A.A., Carrasco,J.S., Hong,C., Brieba,L.G., Rudino-Pinera,E., Blood,P.D., Sawyer,J.E., Johnson,C.D., Dindot,S.V., Sotelo-Mundo,R.R., Criscitiello,M.F. (2014). Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports, 4, 7081.
Artículo
62 - Oliveira,P.D., Lima,F.M., Cruz,M.C., Ferreira,R.C., Sanchez-Flores,A., Cordero,E.M., Cortez,D.R., Ferreira,E.R., Briones,M.R., Mortara,R.A., Silveira,J.F., Bahia,D. (2014). Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution, 25, 157-165.
Artículo
63 - Reid,A.J., Blake,D.P., Ansari,H.R., Billington,K., Browne,H.P., Bryant,J.M., Dunn,M., Hung,S.S., Kawahara,F., Miranda-Saavedra,D., Malas,T., Mourier,T., Naghra,H., Nair,M., Otto,T.D., Rawlings,N.D., Rivailler,P., Sanchez-Flores,A., Sanders,M., Subramaniam,C., Tay,Y.L., Woo,Y., Wu,X., Barrell,B., Dear,P.H., Doerig,C., Gruber,A., Ivens,A.C., Parkinson,J., Rajandream,M.A., Shirley,M.W., Wan,K.L., Berriman,M., Tomley,F.M., Pain,A. (2014). Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research, 24, 1676-1685.
Revisión
64 - Sanchez-Flores,A., Abreu-Goodger,C. (2014). A Practical Guide to Sequencing Genomes and Transcriptomes. Current Topics in Medicinal Chemistry, 14 (3), 398-406.
Artículo
65 - Sotillo,J., Sanchez-Flores,A., Cantacessi,C., Harcus,Y., Pickering,D., Bouchery,T., Camberis,M., Tang,S.C., Giacomin,P., Mulvenna,J., Mitreva,M., Berriman,M., LeGros,G., Maizels,R.M., Loukas,A. (2014). Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular and Cellular Proteomics, 13 (10), 2736-2751. *
Revisión
66 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A. (2014). GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Artículo
68 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A. (2013). The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Artículo
69 - Alsford,S., Eckert,S., Baker,N., Glover,L., Sanchez-Flores,A., Leung,K.F., Turner,D.J., Field,M.C., Berriman,M., Horn,D. (2012). High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384), 232-236. *
Revisión
Artículo
71 - Alsford,S., Turner,D.J., Obado,S.O., Sanchez-Flores,A., Glover,L., Berriman,M., Hertz-Fowler,C., Horn,D. (2011). High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research, 21 (6), 915-924. *
Open Access Artículo
72 - Kikuchi,T., Cotton,J.A., Dalzell,J.J., Hasegawa,K., Kanzaki,N., McVeigh,P., Takanashi,T., Tsai,I.J., Assefa,S.A., Cock,P.J., Otto,T.D., Hunt,M., Reid,A.J., Sanchez-Flores,A., Tsuchihara,K., Yokoi,T., Larsson,M.C., Miwa,J., Maule,A.G., Sahashi,N., Jones,J.T., Berriman,M. (2011). Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens, 7 (9), e1002219. *
Capítulo internacional
74 - Fernandez-Garcia,M., Sanchez-Flores,A., Gonzalez,L.M., Barbas,C., Rey-Stolle,M.F., Sevilla,E., Garcia,A., Montero,E. (2021). Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 217-249.
Capítulo internacional
75 - Gonzalez,L.M., Sevilla,E., Fernandez-Garcia,M., Sanchez-Flores,A., Montero,E. (2021). Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 199-215.
Open Access Memoria in extenso
76 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Sanchez-Flores,F.A., Vega-Arreguin,J. (2018). Análisis del transcriptoma de chile cm-334 en el rompimiento de resistencia a Phytophthora capsici por Nacobbus aberrans. Memoria del Simposio Avances de Investigación Posgrado en Fitosanidad Colegio de Postgraduados 22 agosto 2018. 89-94, Chapingo: Colegio de Posgraduados.
Nacional
77 - Sanchez-Flores,F. (2016). Secuenciacion masiva en la era genomica. Genómica estructural y funcional en las enfermedades multifactoriales. Mexico: Leea Editorial.
Open Access preprint
79 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E. (2021). Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Medarxiv, Preprint posted Posted May 20.
Open Access Preprint
81 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes,P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado,E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez,A., Garces-Ayala,F., Gonzalez-Bonilla,C.R., Grajales-Muniz,C., Borja-Aburto,V.H, Barrera-Badillo,G, Lopez,S., Hernandez-Rivas,L, Perez-Padilla,R, Lopez Martinez,I, Avila-Rios,S, Ruiz-Palacios,G, Ramirez-Gonzalez,J.E, Arias,C.F. (2020). Genomic analysis of early SARS-CoV-2 strains introduced in Mexico. bioRxiv, Preprint posted May 30, 120402.
Open Access Divulgación
82 - Valderrama-Blanco,M.B., Sanchez-Flores,F.A., Burguete-Garcia,A.I., Orozco-Nunez,E. (2020). La colaboración Academia-Gobierno como un elemento importante para la atención temprana de la pandemia de COVID-19 en Cuernavaca. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 22, 18-22.
Open Access Preprint
83 - Velasquez,L.F., Canton,P.E., Sanchez-Flores,A., Bravo,A., Ceron,J. (2020). De novo transcriptome assembly of Premnotrypes vorax (Coleoptera: Curculionidae). Research Square, Preprint posted 17 Jan.
Open Access Divulgación
86 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
Open Access Divulgación
87 - Sanchez-Flores,A. (2015). Las nuevas tecnologías y el cómputo nos ayudan a estudiar detalladamente a los patógenos. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 3-4.
Open Access Divulgación
88 - Sanchez-Flores,A. (2015). Unidad de Secuenciación Masiva y Bioinformática, a la vanguardia de la ciencia. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 23-24.
News Item
89 - Sanchez-Flores,A. (2012). Sequencing parasite populations. Nature Reviews Microbiology, 10 (2), 85. *
News Item
90 - Sanchez-Flores,A. (2011). A new piece of the eukaryotic puzzle. Nature Reviews Microbiology, 9 (11), 769. *
News Item
91 - Sanchez-Flores,A. (2011). A 'clap' for in silico studies. Nature Reviews Microbiology, 9 (1), 7. *
92 - Sanchez Flores, Fidel Alejandro (2007). Analisis de perfiles de entropia en familias estructurales de proteinas . Instituto de Biotecnologia, Doctor en Ciencias Bioquimicas, UNAM.
93 - Sanchez Flores, Fidel Alejandro (2001). Expresion recombinante de la cloro de la cloroperoxidasa de Caldariomy fumago. Instituto de Investigaciones Biomedicas, Licenciatura en Investigacion Biomedica Basica, UNAM. *
Open Access Artículo
94 - Boukadida,C., Taboada,B., Escalera-Zamudio,M., Isa,P., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Rincon-Rubio,A., Matias-Florentino,M., Paz-Juarez,H.E., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Hernandez-Rivas,L., Lopez,S., Lopez-Martinez,I, Avila-Rios,S., Arias,C.F.. Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum, 10 (1), e01249-21.
Artículo
Open Access Artículo
96 - Arevalos-Sanchez,M.M., Maynez-Perez,A.O., Rodriguez-Almeida,F.A., Martinez-Quintana,J.A., Sanchez-Flores,F.A., Felix-Portillo,M., Chavez-Martinez,A., Olvera-Garcia,M.E., Ruiz-Barrera,O., Corral-Luna,A.. In vitro assessment of two novel Cellulases from Trabulsiella odontotermitis for agricultural waste utilization. BMC Biotechnology, 21 (1), 26.
Open Access Artículo
97 - Barona-Gomez,F., Delaye,L., Diaz-Valenzuela,E., Plisson,F., Cruz-Perez,A., Diaz-Sanchez,M., Garcia-Sepulveda,C.A., Sanchez-Flores,A., Perez-Abreu,R., Valencia-Valdespino,F.J., Vega-Megana,N., Munoz-Valle,J.F., Garcia-Gonzalez,O.P., Bernal-Silva,S., Comas-Garcia,A., Cibrian-Jaramillo,A.. Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics, 7 (11), 000684.
Open Access Artículo
98 - Escobar-Zepeda,A., Rosas-Escobar,P., Marquez-Valdelamar,L., de la Torre,P., Partida-Martinez,L.P., Remegaldo,R., Sanchez-Flores,A., Vergara,F.. Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. BMC Research Notes, 14 (1), 333.
in press
99 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C.. Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, Jan 4 [Online ahead of print].
Artículo
100 - Mora-Gonzalez,P.C., Espinosa-Luna,G., Ramirez-Higuera,A., Pena-Montes,C., Valerio-Alfaro,G., Sanchez-Flores,A, Quintana-Castro,R., Sanchez-Otero,M.G., Oliart-Ros,R.M.. Metagenomic Approach to Bacterial Diversity and Lipolytic Enzyme's Genes from a Steam Soil of Los Humeros Geothermal Field (Puebla, México). Geomicrobiology Journal, 38 (4), 304-314.
Open Access artículo
101 - Orta,A.H., Bush,S.J., Gutierrez-Mariscal,M., Castro-Obregon,S., Jaimes-Hoy,L., Grande,R., Vazquez,G., Gorostieta-Salas,E, Martinez-Pacheco,M., Diaz-Barba,K., Cornejo-Paramo,P., Sanchez,A., Tzekely,T., Urrutia,A.O., Cortez,D.. Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology, 4, 1418.
Artículo
102 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E.. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology, 166, 3173-3177.
Open Access Artículo
103 - Taboada-Ramirez,B., Zarate,S., Isa,P., Boukadida,C., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramirez-Gonzalez,J.E., Comas-Garcia,A., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Verleyen,J., Barrera-Badillo,G., Hernandez-Rivas,L., Mejia-Nepomuceno,F., Martinez-Orozco,J.A., Becerril-Vargas,E., Lopez,S., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F.. Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses, 13 (11), 2161.
Artículo
104 - Valencia-Morales,M.D.P., Sanchez-Flores,A., Colin-Castelan,D., Alvarado-Caudillo,Y., Fragoso-Bargas,N., Lopez-Gonzalez,G., Pena-Lopez,T., Ramirez-Nava,M., de la Rocha,C., Rodriguez-Rios,D., Lund,G., Zaina,S.. Somatic genetic mosaicism in the apolipoprotein E-null mouse aorta. Thrombosis and Haemostasis, 121 (11), 1541-1553.
Capítulo internacional
105 - Fernandez-Garcia,M., Sanchez-Flores,A., Gonzalez,L.M., Barbas,C., Rey-Stolle,M.F., Sevilla,E., Garcia,A., Montero,E.. Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 217-249.
Capítulo internacional
106 - Gonzalez,L.M., Sevilla,E., Fernandez-Garcia,M., Sanchez-Flores,A., Montero,E.. Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 199-215.
Libro nacional
Open Access preprint
108 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E.. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Medarxiv, Preprint posted Posted May 20.
Open Access Artículo
Open Access Artículo
110 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S.. Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
Open Access Artículo
Artículo
112 - Hernandez-Valle,J., Sanchez-Flores,A., Poggio,S., Dreyfus,G., Camarena,L.. The CtrA regulon of Rhodobacter sphaeroides favors adaptation to a particular life style. Journal of Bacteriology, 202 (7), 00678-19.
Open Access Artículo
113 - Nabor-Romero,O., Rojas-Martinez,R.I., Ochoa-Martinez,D.L., Vega-Arreguin,J., Sanchez-Flores,F.A., Zavaleta-Mejia,E. Avances en el conocimiento sobre el rompimiento de la resistencia de chile cm-334 (capsicum annuum l.) A phytophthora capsici por nacobbus aberrans. Nematropica, 50 (1), 45-58.
Open Access Artículo
Open Access Artículo
Open Access Artículo
Artículo
117 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez A., Garces-Ayala F., Gonzalez-Bonilla,C.R., Grajales-Muniz C., Borja-Aburto,V, Barrera-Badillo G., Lopez,S., Hernandez-Rivas L., Perez-Padilla,R., Lopez-Martinez,I, Avila-Rios,S., Ruiz-Palacios,G., Ramirez-Gonzalez,J.E., Arias,C.F.. Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology, 94 (18), e01056-20.
Open Access Preprint
Open Access Preprint
119 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes,P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado,E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez,A., Garces-Ayala,F., Gonzalez-Bonilla,C.R., Grajales-Muniz,C., Borja-Aburto,V.H, Barrera-Badillo,G, Lopez,S., Hernandez-Rivas,L, Perez-Padilla,R, Lopez Martinez,I, Avila-Rios,S, Ruiz-Palacios,G, Ramirez-Gonzalez,J.E, Arias,C.F.. Genomic analysis of early SARS-CoV-2 strains introduced in Mexico. bioRxiv, Preprint posted May 30, 120402.
Open Access Divulgación
120 - Valderrama-Blanco,M.B., Sanchez-Flores,F.A., Burguete-Garcia,A.I., Orozco-Nunez,E.. La colaboración Academia-Gobierno como un elemento importante para la atención temprana de la pandemia de COVID-19 en Cuernavaca. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 22, 18-22.
Open Access Preprint
121 - Velasquez,L.F., Canton,P.E., Sanchez-Flores,A., Bravo,A., Ceron,J.. De novo transcriptome assembly of Premnotrypes vorax (Coleoptera: Curculionidae). Research Square, Preprint posted 17 Jan.
Artículo
Artículo
123 - Garcia-Lopez,G., Avila-Gonzalez,D., Garcia-Castro,I.L., Flores-Herrera,H., Molina-Hernandez,A., Portillo,W., Diaz-Martinez,N.E., Sanchez-Flores,A., Verleyen,J., Merchant-Larios,H., Diaz,N.F.. Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research, 375 (1), 31-41.
Open Access Artículo
124 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
Open Access Artículo
126 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S.. De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
Open Access Preprint
Open Access Preprint
Artículo
129 - Barreto-Curiel, F., Ramirez-Puebla, S. T., Ringo, E., Escobar-Zepeda, A., Godoy-Lozano, E., Vazquez-Duhalt, R., Sanchez-Flores, A., Viana, M. T.. Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi. Animal Feed Science and Technology, 245, 91-103.
Artículo
130 - Carrillo-Tapia, E., Garcia-Garcia, E., Herrera-Gonzalez, N.E., Yamazaki-Nakashimada, M.A., Staines-Boone, A.T., Segura-Mendez, N.H., Scheffler-Mendoza, S.C., Farrill-Romanillos, O., Gonzalez-Serrano, M.E., Rodriguez-Alba, J.C., Santos-Argumedo, L., Berron-Ruiz, L., Sanchez-Flores, A., Lopez-Herrera, G.. Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology, 14 (1), 83-93.
Open Access Artículo
131 - Contreras-Castro, L., Maldonado, L.A., Quintana, E.T., Raggi, L., Sanchez-Flores, A.. Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Microbiology Resource Announcements, 6 (21), e00436-18.
Open Access Artículo
Artículo
133 - Garcia, C.F., Pedrini, N., Sanchez-Paz, A., Reyna-Blanco, C.S., Lavarias, S., Muhlia-Almazan, A., Fernandez-Gimenez, A., Laino, A., de-la-Re-Vega, E., Lukaszewicz, G., Lopez-Zavala, A.A., Brieba, L.G., Criscitello, M.F., Carrasco-Miranda, J.S., Garcia-Orozco, K.D., Ochoa-Leyva, A., Rudino-Pinera, E., Sanchez-Flores, A., Sotelo-Mundo, R.R.. De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics, 37, 74-81.
Artículo
Open Access Artículo
Open Access Artículo
136 - Munoz-Medina,J.E., Garcia-Knight,M.A., Sanchez-Flores,A., Monroy-Munoz,I.E., Grande,R., Esbjornsson,J., Santacruz-Tinoco,C.E., Gonzalez-Bonilla,C.R.. Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. PLoS ONE, 13 (12), e0209292.
Artículo
137 - Olvera-Garcia, M., Sanchez-Flores, A., Quirasco, Baruch M.. Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology, 102 (5), 102490, 2251-2267.
Artículo
138 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M.. Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.
Open Access Memoria in extenso
139 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Sanchez-Flores,F.A., Vega-Arreguin,J.. Análisis del transcriptoma de chile cm-334 en el rompimiento de resistencia a Phytophthora capsici por Nacobbus aberrans. Memoria del Simposio Avances de Investigación Posgrado en Fitosanidad Colegio de Postgraduados 22 agosto 2018. 89-94, Chapingo: Colegio de Posgraduados.
Open Access Artículo
140 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A.. Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.
Artículo
Open Access Artículo
142 - Sandoval-Azuara, S.E., Perea-Jacobo, R., Muniz-Salazar, R., Robbe-Austerman, S., Perera-Ortiz, A., Lopez-Valencia, G., Bravo, D.M., Sanchez-Flores, A., Miranda-Guzman, D., Flores-Lopez, C.A., Zenteno-Cuevas, R., Laniado-Laborin, R., Lafarga de la, Cruz F., Stuber, T.P.. Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases, 63, 48-56.
Open Access Artículo
143 - Titulaer, M., Melgoza-Castillo, A., Panjabi, A.O., Sanchez-Flores, A., Martinez-Guerrero, J.H., Macias-Duarte, A., Fernandez, J.A.. Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. PLoS ONE, 12 (12), e0189695.
Open Access Divulgación
144 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
Open Access Artículo
Artículo
Artículo
147 - Hunt,V.L., Tsai,I.J., Coghlan,A., Reid,A.J., Holroyd,N., Foth,B.J., Tracey,A., Cotton,J.A., Stanley,E.J., Beasley,H., Bennett,H.M., Brooks,K., Harsha,B., Kajitani,R., Kulkarni,A., Harbecke,D., Nagayasu,E., Nichol,S., Ogura,Y., Quail,M.A., Randle,N., Xia,D., Brattig,N.W., Soblik,H., Ribeiro,D.M., Sanchez-Flores,A., Hayashi,T., Itoh,T., Denver,D.R., Grant,W., Stoltzfus,J.D., Lok,J.B., Murayama,H., Wastling,J., Streit,A., Kikuchi,T., Viney,M., Berriman,M.. The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48, 299-307.
Open Access Artículo
148 - Ramirez-Puebla,S.T., Ormeno-Orrillo,E., Vera-Ponce de Leon A., Lozano,L., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E.. Genomes of Candidatus Wolbachia bourtzisii wDacA and Candidatus Wolbachia pipientis wDacB from the Cochineal Insect Dactylopius coccus (Hemiptera: Dactylopiidae). G3: Genes, Genomes, Genetics, 6 (10), 3343-3349.
Open Access Artículo
149 - Rodriguez-Anaya,L.Z., Ibarra-Gamez,J.C., Lares-Villa,F., Casillas-Hernandez,R., Sanchez-Flores,A., Gonzalez-Galaviz,J.R.. Analysis of repeated compound units in ORF94 of white spot syndrome virus isolated from Litopenaeus vannamei from outbreak and non-outbreak shrimp farms in Sonora, Mexico. Latin American Journal of Aquatic Research, 44 (4), 850-854.
Open Access Artículo
150 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A.. Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
151 - Sanchez-Flores,A., Penazola,F., Carpinteyro-Ponce,J., Nazario-Yepiz,N., Abreu-Goodger,C., Machado,C.A., Markow,T.A.. Genome Evolution in Three Species of Cactophilic Drosophila. G3: Genes, Genomes, Genetics, 6 (10), 3097-3105.
Open Access Artículo
152 - Vera-Ponce De Leon,A., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E.. Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology, 7, 954.
Nacional
153 - Sanchez-Flores,F.. Secuenciacion masiva en la era genomica. Genómica estructural y funcional en las enfermedades multifactoriales. Mexico: Leea Editorial.
Open Access Artículo
Open Access Artículo
155 - Dautt-Castro,M., Ochoa-Leyva,A., Contreras-Vergara,C.A., Pacheco-Sanchez,M.A., Casas-Flores,S., Sanchez-Flores,A., Kuhn,D.N., Islas-Osuna,M.A.. Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science, 6.
Open Access Revisión
Open Access Artículo
157 - Fontes-Perez,H., Olvera-Garcia,M., Chavez-Martinez,A., Rodriguez-Almeida,F.A., Arzola-Alvarez,C.A., Sanchez-Flores,A., Corral-Luna,A.. Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements, 3 (6), art. no. e0129015.
Artículo
158 - Glover,L., Alsford,S., Baker,N., Turner,D.J., Sanchez-Flores,A., Hutchinson,S., Hertz-Fowler,C., Berriman,M., Horn,D.. Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols, 10 (1), 106-133.
Open Access Artículo
159 - Gomez-Angulo,J., Vega-Alvarado,L., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Arrizon,J., Sanchez-Flores,A.. Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements, 3 (4).
Open Access Artículo
160 - Olvera-Garcia,M., Fontes-Perez,H., Chavez-Martinez,A., Ruiz-Barrera O., Rodriguez-Almeida,F.A., Sanchez-Flores,A., Corral-Luna,A.. Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements, 3 (6), art. no. e0128915.
Open Access Artículo
161 - Valencia-Morales,Mdel P., Zaina,S., Heyn,H., Carmona,F.J., Varol,N., Sayols,S., Condom,E., Ramirez-Ruz,J., Gomez,A., Moran,S., Lund,G., Rodriguez-Rios,D., Lopez-Gonzalez,G., Ramirez-Nava,M., de la Rocha C., Sanchez-Flores,A., Esteller,M.. The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. BMC Medical Genomics, 8 (1), 85.
Open Access Artículo
162 - Vega-Alvarado,L., Gomez-Angulo,J., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Sanchez-Flores,A., Arrizon,J.. High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements, 3 (3).
Open Access Artículo
163 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D.. Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Divulgación
164 - Sanchez-Flores,A.. Las nuevas tecnologías y el cómputo nos ayudan a estudiar detalladamente a los patógenos. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 3-4.
Open Access Divulgación
165 - Sanchez-Flores,A.. Unidad de Secuenciación Masiva y Bioinformática, a la vanguardia de la ciencia. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 23-24.
Open Access Artículo
166 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E.. High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Open Access Artículo
167 - Ghaffari,N., Sanchez-Flores,A., Doan,R., Garcia-Orozco,K.D., Chen,P.L., Ochoa-Leyva,A., Lopez-Zavala,A.A., Carrasco,J.S., Hong,C., Brieba,L.G., Rudino-Pinera,E., Blood,P.D., Sawyer,J.E., Johnson,C.D., Dindot,S.V., Sotelo-Mundo,R.R., Criscitiello,M.F.. Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports, 4, 7081.
Artículo
168 - Oliveira,P.D., Lima,F.M., Cruz,M.C., Ferreira,R.C., Sanchez-Flores,A., Cordero,E.M., Cortez,D.R., Ferreira,E.R., Briones,M.R., Mortara,R.A., Silveira,J.F., Bahia,D.. Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution, 25, 157-165.
Artículo
169 - Reid,A.J., Blake,D.P., Ansari,H.R., Billington,K., Browne,H.P., Bryant,J.M., Dunn,M., Hung,S.S., Kawahara,F., Miranda-Saavedra,D., Malas,T., Mourier,T., Naghra,H., Nair,M., Otto,T.D., Rawlings,N.D., Rivailler,P., Sanchez-Flores,A., Sanders,M., Subramaniam,C., Tay,Y.L., Woo,Y., Wu,X., Barrell,B., Dear,P.H., Doerig,C., Gruber,A., Ivens,A.C., Parkinson,J., Rajandream,M.A., Shirley,M.W., Wan,K.L., Berriman,M., Tomley,F.M., Pain,A.. Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research, 24, 1676-1685.
Revisión
170 - Sanchez-Flores,A., Abreu-Goodger,C.. A Practical Guide to Sequencing Genomes and Transcriptomes. Current Topics in Medicinal Chemistry, 14 (3), 398-406.
Artículo
171 - Sotillo,J., Sanchez-Flores,A., Cantacessi,C., Harcus,Y., Pickering,D., Bouchery,T., Camberis,M., Tang,S.C., Giacomin,P., Mulvenna,J., Mitreva,M., Berriman,M., LeGros,G., Maizels,R.M., Loukas,A.. Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular and Cellular Proteomics, 13 (10), 2736-2751. *
Revisión
172 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A.. GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Open Access Revisión
Artículo
174 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A.. The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Artículo
175 - Alsford,S., Eckert,S., Baker,N., Glover,L., Sanchez-Flores,A., Leung,K.F., Turner,D.J., Field,M.C., Berriman,M., Horn,D.. High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384), 232-236. *
Revisión
News Item
177 - Sanchez-Flores,A.. Sequencing parasite populations. Nature Reviews Microbiology, 10 (2), 85. *
Artículo
178 - Alsford,S., Turner,D.J., Obado,S.O., Sanchez-Flores,A., Glover,L., Berriman,M., Hertz-Fowler,C., Horn,D.. High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research, 21 (6), 915-924. *
Open Access Artículo
179 - Kikuchi,T., Cotton,J.A., Dalzell,J.J., Hasegawa,K., Kanzaki,N., McVeigh,P., Takanashi,T., Tsai,I.J., Assefa,S.A., Cock,P.J., Otto,T.D., Hunt,M., Reid,A.J., Sanchez-Flores,A., Tsuchihara,K., Yokoi,T., Larsson,M.C., Miwa,J., Maule,A.G., Sahashi,N., Jones,J.T., Berriman,M.. Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens, 7 (9), e1002219. *
News Item
180 - Sanchez-Flores,A.. A new piece of the eukaryotic puzzle. Nature Reviews Microbiology, 9 (11), 769. *
News Item
181 - Sanchez-Flores,A.. A 'clap' for in silico studies. Nature Reviews Microbiology, 9 (1), 7. *
184 - Sanchez Flores, Fidel Alejandro. Expresion recombinante de la cloro de la cloroperoxidasa de Caldariomy fumago. Instituto de Investigaciones Biomedicas, Licenciatura en Investigacion Biomedica Basica, UNAM. *

  • Teléfonos
  • Oficina +52 (777) 329-1864
    desde la CDMX 562-27864
    Red UNAM 27864
  • Laboratorio +52 (777) 329-1777 ext 38151.
    desde la CDMX 562-27777 ext 38151
    Red UNAM 38151

Encargado de la Unidad de Secuenciación Masiva y Bioinformática Unidad
Dirección
  • Teléfonos
    +52 (55) 562-27671
    +52 (55) 562-27672
    +52 (55) 562-27673