Bioinformática aplicada a las ciencias ómicas
Genómica y transcriptomica de patógenos y parásitos
Microbiología Ambiental
Número de registros: 4
  • Activos
  • Vencidos
  • Bacterias marinas con potencial para degradar plásticos, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 1900
  • Reacreditación laboratorio nacional de apoyo tecnológico de las ciencias genómicas "lnatcg", CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 1900
  • Local pathogen portal in mexico, Swiss Institute of Bioinformatics, 2025
  • genómica y transcriptómica del isópodo parásito cymothoa exigua, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2017 - 2019

Nivel D del PRIDE
Nivel II del SNII
  • Doctorado, Ciencias Bioquímicas, IBT-UNAM (2007) con especialidad en Bioinformática

  • Licenciatura, Investigación Biomédica Básica, IIB-UNAM (2001)

  • Estancia Temporal
  • Doctorado (UNAM u Otros)
  • Magali Yazmin Galicia Ortiz

    Transcriptómica comparativa y evaluación de potenciales blancos en el Adenocarcinoma Ductal Pancreático

  • Ilani Yahel Godínez Bautista

    Predicción, caracterización y función de RNAs largos no codificantes en Babesia spp. durante el proceso de invasión a glóbulos rojos

  • M. C. Rebeca Gonzalez Ortiz

    Transcriptómica comparativa de la respuesta farmacológica al compuesto az5363 en dos líneas celulares de adenocarcinoma ductal humano.

  • Maestría (UNAM u Otros)
* Indica publicación con otra institución de adscripción
Total de publicaciones: 179
  • Tipo
  • Fecha
Open Access Artículo
5 - Godoy-Lozano,E.E., Raggi,L., Escobar-Zepeda,A., Adaya,L., Cuervo-Amaya,D.H., Gracia,A., Sanchez-Flores,A., Diaz-Camino,C., Pardo-Lopez,L. (2026). Enrichment hydrocarbon-degrading bacterial communities from the southern Gulf of Mexico in long-term stored sediments. Biodegradation, 37 (2), 45.
Open Access Artículo
6 - Ozubek,S., Sanchez-Flores,A., Montero,E., Alzan,H., Suarez,C.E., Grande,R., Gil,A., Aktas,M., Gonzalez,L.M. (2026). Comparative analysis of the EF-1a Intergenic Region in Babesia divergens isolates: Insights into TA Repeat Variation and Potential Regulatory Implications. International Journal of Molecular Sciences, 27 (5), 2222.
Open Access Artículo
7 - Singh,P., Estrada,K., Gonzalez,L.M., Grande,R., Sanchez-Prieto,S., Cornillot,E., Harb,O., Sanchez-Flores,A., Montero,E., Le Roch,K.G., Lonardi,S., Mamoun,C.B. (2026). Babesia hegotelforum sp. nov., a zoonotic Babesia species previously referred to as Babesia sp. MO1. Emerging Microbes & Infections, 15 (1), 2637280.
Artículo
8 - Taboada,B., Zarate,S., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Vazquez-Perez,J.A., Salas-Lais,A.G., Zarate,A., Arias,C.F. (2026). Genomic Diversity and Geographic Distribution of SARS-CoV-2 in Mexico: Insights From 4 Years of Genomic Surveillance. Archives of Medical Research, 57 (2), 103289.
Open Access Artículo
9 - Calderon-Ezquerro,M.C., Brunner-Mendoza,C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C., Ponce de Leon,A., Ortega-Rosas,C.I. (2025). Genetic sequencing of the airborne fungal spectrum and air quality at a public hospital in Mexico City. PLOS Global Public Health, 5 (6), e0004784.
Open Access Artículo
10 - Lopez-Teros,M., Avila-Galicia,K.E., Librado-Osorio,R., Jimenez-Jacinto,V., Garcia-Alvarez,J.A., Hernandez-Montes,G., Sanchez-Flores,A., Alarcon-Aguilar,A., Luna-Lopez,A., Konigsberg,M. (2025). Palmitate-Induced Primary Rat Senescent Astrocytes Exhibit Higher Inflammatory Activity and a Distinct Transcriptomic Profile Compared to Reactive Astrocytes. Journal of Neurochemistry, 169 (7), e70164.
Open Access Artículo
11 - Martinez-Garcia,G., Estrada,K., Lira-Amaya,J.J., Santamaria-Epinosa,R.M., Lopez-Arellano,M.E., Sciutto-Conde,E.L., Rojas-Martinez,C., Alvarez-Martinez,J.A., Sanchez-Flores,A., Figueroa-Millan,J.V (2025). Comparative Analysis of Immune Response Genes Induced by a Virulent or Attenuated Strain of Babesia bigemina. International Journal of Molecular Sciences, 26 (2), 487.
Open Access Artículo
13 - Zarate,S., Taboada,B., Torres-Rivera,K., Bautista-Carbajal,P., Garcia-Leon,M.L., Tabla-Orozco,V., Juarez-Tobias,M.S., Noyola,D.E., Martinez-Arce,P.A., Espinosa-Sotero,M.D., Martinez-Aguilar,G., Rojas-Larios,F., Sanchez-Flores,A., Arias,C.F., Wong-Chew,R.M. (2025). Circulation of RSV Subtypes A and B Among Mexican Children During the 2021-2022 and 2022-2023 Seasons. Pathogens, 14 (10), 996.
Open Access Artículo
14 - Brunner-Mendoza,C., Calderon-Ezquerro,M.C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C. (2024). Diversity and Composition of the Airborne Fungal Community in Mexico City with a Metagenomic Approach. Microorganisms, 12 (12), 2632.
Open Access Artículo
15 - Calderon-Ezquerro,M.C., Ponce de Leon,A.A., Brunner-Mendoza,C., Guerrero-Guerra,C.C., Sanchez-Flores,A., Salinas-Peralta,I., Lopez-Jacome,L.E., Colin-Castro,C.A, Martinez-Zavaleta,M.G. (2024). Assessment of airborne bacteria from a public health institution in Mexico City. PLOS Global Public Health, 4 (11), e0003672.
Artículo
16 - Embarcadero-Jimenez,S., Araujo-Palomares,C.L., Moreno-Perlin,T., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,A., Calcaneo-Hernandez,G., Silva-Jimenez,H. (2024). Physiology and comparative genomics of the haloalkalitolerant and hydrocarbonoclastic marine strain Rhodococcus ruber MSA14. Archives of Microbiology, 206 (7), 328.
Open Access Artículo
17 - Garcia-Lopez,R., Taboada,B., Zarate,S., Munoz-Medina,J.E., Salas-Lais,A.G., Herrera-Estrella,A., Boukadida,C., Vazquez-Perez,J.A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F. (2024). Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover. Microbial Genomics, 10 (3), 001220.
Open Access Artículo
20 - Santamaria,R.M., Estrada,K., Lopez,M.E., Rojas,E., Martinez,G., Alcala,Y., Rojas,C., Alvarez,J.A., Lira,J.J., Santamaria,T.V., Sanchez-Flores,A., Figueroa,J.V. (2024). Comparative Transcriptome Analysis of Babesia bigemina Attenuated Vaccine and Virulent Strains of Mexican Origin. Vaccines (Basel), 12 (3), 309.
Open Access Artículo
21 - Singh,P., Vydyam,P., Fang,T., Estrada,K., Gonzalez,L.M., Grande,R., Kumar,M., Chakravarty,S., Berry,V., Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Harb,O., Sanchez-Flores,A., Montero,E., Le Roch,K.G., Lonardi,S., Mamoun,C.B. (2024). Insights Into the Evolution, Virulence and Speciation of Babesia MO1 and Babesia divergens Through Multiomics Analyses. Emerging Microbes and Infections, 13 (1), 2386136.
Open Access Artículo
22 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Boukadida,C., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M. (2023). Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico. Elife, 12, e82069.
Open Access Artículo
Open Access Artículo
24 - Geiger,O., Sanchez-Flores,A., Padilla-Gomez,J., Degli-Esposti M. (2023). Multiple approaches of cellular metabolism define the bacterial ancestry of mitochondria. Science Advances, 9 (32), eadh0066.
Open Access Artículo
25 - Loza,A., Wong-Chew,R.M., Jimenez-Corona,M.E., Zarate,S., Lopez,S., Ciria,R., Palomares,D., Garcia-Lopez,R., Isa,P., Taboada,B., Rosales,M., Boukadida,C., Herrera-Estrella,A., Mojica,N.S., Rivera-Gutierrez,X., Munoz-Medina,J.E., Salas-Lais,A.G., Sanchez-Flores,A., Vazquez-Perez,J.A., Arias,C.F., Gutierrez-Rios,R.M. (2023). Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health, 10, 1050673.
Open Access Articulo
26 - Murga-Garrido,S.M., Ulloa-Perez,E.J., Diaz-Benitez,C.E, Orbe-Orihuela,Y.C, Cornejo-Granados,F., Ochoa-Leyva,A, Sanchez-Flores,A, Cruz,M, Castaneda-Marquez,A.C, Plett-Torres,T, Burguete-Garcia,A.I., Lagunas-Martinez,A. (2023). Virulence Factors of the Gut Microbiome Are Associated with BMI and Metabolic Blood Parameters in Children with Obesity. Microbiology Spectrum, 11 (2), e0338222.
Artículo
27 - Nabor-Romero,O., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Silva-Valenzuela,M., Vega-Arreguin,J., Sanchez-Flores,A., Rojas-Martinez,R.I (2023). Transcriptional alterations induced by Nacobbus aberrans in interaction with chili pepper CM-334 and Phytophthora capsici. Physiological and Molecular Plant Pathology, 123, 101942.
Open Access Artículo
28 - Rojas-Vargas,J., Adaya,L., Lacerda,A.L., Pedrotti,M.-L., Sanchez-Flores,A., Pardo-Lopez,L. (2023). Draft genome sequences of six bacteria isolated from polylactic acid samples from the Mediterranean Sea. Microbiology Resource Announcements, 12 (11), e0079423.
Open Access Artículo
29 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B. (2023). Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology, 8 (5), 845-859.
Open Access Artículo
30 - Taboada,B.I., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F. (2023). SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Microbial Genomics, 9 (12), 001120.
Open Access Artículo
32 - Zarate,S., Taboada,B., Rosales-Rivera,M., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Selem-Mojica N., Salas-Lais,A.G., Vazquez-Perez,J.A., Cabrera-Gaytan,D.A., Fernandes-Matano,L., Uribe-Noguez,L.A., Chale-Dzul,J.B., Maldonado Meza,B.I., Mejia-Nepomuceno,F., Perez-Padilla,R., Gutierrez-Rios,R.M., Loza,A, Roche,B, Lopez,S, Arias,C.F (2023). Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses, 15 (1), 243.
Open Access Artículo
33 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P. (2022). The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology, 12, 876839.
Open Access Artículo
34 - Boukadida,C., Taboada,B., Escalera-Zamudio,M., Isa,P., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Rincon-Rubio,A., Matias-Florentino,M., Paz-Juarez,H.E., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Hernandez-Rivas,L., Lopez,S., Lopez-Martinez,I, Avila-Rios,S., Arias,C.F. (2022). Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum, 10 (1), e01249-21.
Artículo
35 - Corona-Herrera,G.A., Navarrete-Ramirez,P., Sanchez-Flores,F.A., Jimenez-Jacinto,V., Martinez-Palacios,C.A., Palomera-Sanchez,Z., Volkoff,H., Martinez-Chavez,C.C. (2022). Shining light on the transcriptome: Molecular regulatory networks leading to a fast-growth phenotype by continuous light in an environmentally sensitive teleost (Atherinopsidae). Journal of photochemistry and photobiology.B, Biology, 235, 112550.
Open Access Revisión
36 - Garcia-Lopez,R., Laresgoiti-Servitje,E., Lemus-Martin,R., Sanchez-Flores,A., Sanders-Velez,C. (2022). The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. MBio, 13 (5), e0106021.
Open Access Artículo
37 - Isa,P., Taboada,B., Garcia-Lopez,R., Boukadida,C., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Hernandez-Teran,A., Romero-Espinoza,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Lopez,S., Hernandez-Rivas,L., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F. (2022). Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. BMC Infectious Diseases, 22 (1), 792.
Open Access Artículo
39 - Murga-Garrido,S.M., Orbe-Orihuela,Y.C., Diaz-Benitez,C.E., Castaneda-Marquez,A.C., Cornejo-Granados,F., Ochoa-Leyva,A., Sanchez-Flores,A., Cruz,M., Burguete-Garcia,A.I., Lagunas-Martinez,A. (2022). Alterations of the Gut Microbiome Associated to Methane Metabolism in Mexican Children with Obesity. Children, 9 (2), 148.
Open Access Artículo
40 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Vega-Arreguin,J., Ochoa-Martinez,D., Sanchez-Flores,A., Romo-Castillo,M. (2022). Transcriptomic Analysis of the CM-334/P. capsici/N. aberrans Pathosystem to Identify Components in Plant Resistance and Resistance-Breaking Responses. International Journal of Plant Biology, 13 (2), 151-162.
Artículo
41 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I (2022). Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research, 53 (4), 407-415.
Open Access Carta nacional
42 - Perelman,C., Fastlicht,A., Sanchez-Flores,A., Wegman-Ostrosky,T. (2022). Superspreading event of Covid-19 in adolescents: is there a difference between the vaccinated and the unvaccinated?. Salud Publica de Mexico, 64 (5, sept-oct), 446-447.
Open Access Artículo
Open Access Artículo
44 - Rojas-Vargas,J., Gonzalez-Sanchez,R., Sanchez-Flores,A., Licea-Navarro,A.F., Pardo-Lopez,L. (2022). Complete Genome Sequence of Halopseudomonas aestusnigri Strain GOM5, Isolated from Asphalt Marine Sediments of the Gulf of Mexico. Microbiology Resource Announcements, 11 (4), e0122221.
Open Access Artículo
45 - Sanchez-Correa,M.D.S., Isidra-Arellano,M.C., Pozas-Rodriguez,E.A., Reyero-Saavedra,M.D.R., Morales-Salazar,A., Del Castillo,S.M.L., Sanchez-Flores,A., Jimenez-Jacinto,V., Reyes,J.L., Formey,D., Valdes-Lopez,O. (2022). Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis. Frontiers in Plant Science, 13, 1034419.
Open Access Artículo
47 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F. (2022). Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses, 14 (6), 1165.
Open Access Artículo
48 - Vazquez-Chacon,C.A., Rodriguez-Gaxiola,F.J., Sanchez-Flores,A., Montano,S., Bello-Rios,C., Fonseca-Coronado,S., Lopez-Carrera,C.F., Martinez-Guarneros,A., Parra-Unda,R., Garcia-Magallanes,N., Arambula-Meraz,E., Escobar-Gutierrez,A., Cruz-Rivera,M., Lopez-Duran,P.A. (2022). Intra-host genetic population diversity: Role in emergence and persistence of drug resistance among Mycobacterium tuberculosis complex minor variants. Infection, Genetics and Evolution, 101, 105288.
Open Access Artículo
49 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F. (2022). The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum, 10 (2), e0224021.
Open Access Artículo
50 - Arevalos-Sanchez,M.M., Maynez-Perez,A.O., Rodriguez-Almeida,F.A., Martinez-Quintana,J.A., Sanchez-Flores,F.A., Felix-Portillo,M., Chavez-Martinez,A., Olvera-Garcia,M.E., Ruiz-Barrera,O., Corral-Luna,A. (2021). In vitro assessment of two novel Cellulases from Trabulsiella odontotermitis for agricultural waste utilization. BMC Biotechnology, 21 (1), 26.
Open Access Artículo
51 - Barona-Gomez,F., Delaye,L., Diaz-Valenzuela,E., Plisson,F., Cruz-Perez,A., Diaz-Sanchez,M., Garcia-Sepulveda,C.A., Sanchez-Flores,A., Perez-Abreu,R., Valencia-Valdespino,F.J., Vega-Megana,N., Munoz-Valle,J.F., Garcia-Gonzalez,O.P., Bernal-Silva,S., Comas-Garcia,A., Cibrian-Jaramillo,A. (2021). Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics, 7 (11), 000684.
Open Access Artículo
52 - Escobar-Zepeda,A., Rosas-Escobar,P., Marquez-Valdelamar,L., de la Torre,P., Partida-Martinez,L.P., Remegaldo,R., Sanchez-Flores,A., Vergara,F. (2021). Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. BMC Research Notes, 14 (1), 333.
Artículo
53 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C. (2021). Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, 105 (9).
Artículo
54 - Mora-Gonzalez,P.C., Espinosa-Luna,G., Ramirez-Higuera,A., Pena-Montes,C., Valerio-Alfaro,G., Sanchez-Flores,A, Quintana-Castro,R., Sanchez-Otero,M.G., Oliart-Ros,R.M. (2021). Metagenomic Approach to Bacterial Diversity and Lipolytic Enzyme's Genes from a Steam Soil of Los Humeros Geothermal Field (Puebla, México). Geomicrobiology Journal, 38 (4), 304-314.
Open Access artículo
55 - Orta,A.H., Bush,S.J., Gutierrez-Mariscal,M., Castro-Obregon,S., Jaimes-Hoy,L., Grande,R., Vazquez,G., Gorostieta-Salas,E, Martinez-Pacheco,M., Diaz-Barba,K., Cornejo-Paramo,P., Sanchez,A., Tzekely,T., Urrutia,A.O., Cortez,D. (2021). Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology, 4, 1418.
Artículo
56 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E. (2021). Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology, 166, 3173-3177.
Open Access Artículo
57 - Taboada-Ramirez,B., Zarate,S., Isa,P., Boukadida,C., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramirez-Gonzalez,J.E., Comas-Garcia,A., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Verleyen,J., Barrera-Badillo,G., Hernandez-Rivas,L., Mejia-Nepomuceno,F., Martinez-Orozco,J.A., Becerril-Vargas,E., Lopez,S., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F. (2021). Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses, 13 (11), 2161.
Artículo
58 - Valencia-Morales,M.D.P., Sanchez-Flores,A., Colin-Castelan,D., Alvarado-Caudillo,Y., Fragoso-Bargas,N., Lopez-Gonzalez,G., Pena-Lopez,T., Ramirez-Nava,M., de la Rocha,C., Rodriguez-Rios,D., Lund,G., Zaina,S. (2021). Somatic genetic mosaicism in the apolipoprotein E-null mouse aorta. Thrombosis and Haemostasis, 121 (11), 1541-1553.
Open Access Artículo
60 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S. (2020). Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
Artículo
62 - Hernandez-Valle,J., Sanchez-Flores,A., Poggio,S., Dreyfus,G., Camarena,L. (2020). The CtrA regulon of Rhodobacter sphaeroides favors adaptation to a particular life style. Journal of Bacteriology, 202 (7), 00678-19.
Open Access Artículo
63 - Nabor-Romero,O., Rojas-Martinez,R.I., Ochoa-Martinez,D.L., Vega-Arreguin,J., Sanchez-Flores,F.A., Zavaleta-Mejia,E (2020). Avances en el conocimiento sobre el rompimiento de la resistencia de chile cm-334 (capsicum annuum l.) A phytophthora capsici por nacobbus aberrans. Nematropica, 50 (1), 45-58.
Artículo
67 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez A., Garces-Ayala F., Gonzalez-Bonilla,C.R., Grajales-Muniz C., Borja-Aburto,V, Barrera-Badillo G., Lopez,S., Hernandez-Rivas L., Perez-Padilla,R., Lopez-Martinez,I, Avila-Rios,S., Ruiz-Palacios,G., Ramirez-Gonzalez,J.E., Arias,C.F. (2020). Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology, 94 (18), e01056-20.
Artículo
69 - Garcia-Lopez,G., Avila-Gonzalez,D., Garcia-Castro,I.L., Flores-Herrera,H., Molina-Hernandez,A., Portillo,W., Diaz-Martinez,N.E., Sanchez-Flores,A., Verleyen,J., Merchant-Larios,H., Diaz,N.F. (2019). Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research, 375 (1), 31-41.
Open Access Artículo
70 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
72 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S. (2019). De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
Artículo
73 - Barreto-Curiel, F., Ramirez-Puebla, S. T., Ringo, E., Escobar-Zepeda, A., Godoy-Lozano, E., Vazquez-Duhalt, R., Sanchez-Flores, A., Viana, M. T. (2018). Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi. Animal Feed Science and Technology, 245, 91-103.
Artículo
74 - Carrillo-Tapia, E., Garcia-Garcia, E., Herrera-Gonzalez, N.E., Yamazaki-Nakashimada, M.A., Staines-Boone, A.T., Segura-Mendez, N.H., Scheffler-Mendoza, S.C., Farrill-Romanillos, O., Gonzalez-Serrano, M.E., Rodriguez-Alba, J.C., Santos-Argumedo, L., Berron-Ruiz, L., Sanchez-Flores, A., Lopez-Herrera, G. (2018). Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology, 14 (1), 83-93.
Open Access Artículo
75 - Contreras-Castro, L., Maldonado, L.A., Quintana, E.T., Raggi, L., Sanchez-Flores, A. (2018). Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Microbiology Resource Announcements, 6 (21), e00436-18.
Artículo
77 - Garcia, C.F., Pedrini, N., Sanchez-Paz, A., Reyna-Blanco, C.S., Lavarias, S., Muhlia-Almazan, A., Fernandez-Gimenez, A., Laino, A., de-la-Re-Vega, E., Lukaszewicz, G., Lopez-Zavala, A.A., Brieba, L.G., Criscitello, M.F., Carrasco-Miranda, J.S., Garcia-Orozco, K.D., Ochoa-Leyva, A., Rudino-Pinera, E., Sanchez-Flores, A., Sotelo-Mundo, R.R. (2018). De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics, 37, 74-81.
Artículo
Open Access Artículo
80 - Munoz-Medina,J.E., Garcia-Knight,M.A., Sanchez-Flores,A., Monroy-Munoz,I.E., Grande,R., Esbjornsson,J., Santacruz-Tinoco,C.E., Gonzalez-Bonilla,C.R. (2018). Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. PLoS ONE, 13 (12), e0209292.
Artículo
81 - Olvera-Garcia, M., Sanchez-Flores, A., Quirasco, Baruch M. (2018). Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology, 102 (5), 102490, 2251-2267.
Artículo
82 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M. (2018). Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.
Open Access Artículo
83 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A. (2017). Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.
Open Access Artículo
85 - Sandoval-Azuara, S.E., Perea-Jacobo, R., Muniz-Salazar, R., Robbe-Austerman, S., Perera-Ortiz, A., Lopez-Valencia, G., Bravo, D.M., Sanchez-Flores, A., Miranda-Guzman, D., Flores-Lopez, C.A., Zenteno-Cuevas, R., Laniado-Laborin, R., Lafarga de la, Cruz F., Stuber, T.P. (2017). Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases, 63, 48-56.
Open Access Artículo
86 - Titulaer, M., Melgoza-Castillo, A., Panjabi, A.O., Sanchez-Flores, A., Martinez-Guerrero, J.H., Macias-Duarte, A., Fernandez, J.A. (2017). Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. PLoS ONE, 12 (12), e0189695.
Open Access Artículo
Artículo
89 - Hunt,V.L., Tsai,I.J., Coghlan,A., Reid,A.J., Holroyd,N., Foth,B.J., Tracey,A., Cotton,J.A., Stanley,E.J., Beasley,H., Bennett,H.M., Brooks,K., Harsha,B., Kajitani,R., Kulkarni,A., Harbecke,D., Nagayasu,E., Nichol,S., Ogura,Y., Quail,M.A., Randle,N., Xia,D., Brattig,N.W., Soblik,H., Ribeiro,D.M., Sanchez-Flores,A., Hayashi,T., Itoh,T., Denver,D.R., Grant,W., Stoltzfus,J.D., Lok,J.B., Murayama,H., Wastling,J., Streit,A., Kikuchi,T., Viney,M., Berriman,M. (2016). The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48, 299-307.
Open Access Artículo
90 - Ramirez-Puebla,S.T., Ormeno-Orrillo,E., Vera-Ponce de Leon A., Lozano,L., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E. (2016). Genomes of Candidatus Wolbachia bourtzisii wDacA and Candidatus Wolbachia pipientis wDacB from the Cochineal Insect Dactylopius coccus (Hemiptera: Dactylopiidae). G3: Genes, Genomes, Genetics, 6 (10), 3343-3349.
Open Access Artículo
91 - Rodriguez-Anaya,L.Z., Ibarra-Gamez,J.C., Lares-Villa,F., Casillas-Hernandez,R., Sanchez-Flores,A., Gonzalez-Galaviz,J.R. (2016). Analysis of repeated compound units in ORF94 of white spot syndrome virus isolated from Litopenaeus vannamei from outbreak and non-outbreak shrimp farms in Sonora, Mexico. Latin American Journal of Aquatic Research, 44 (4), 850-854.
Open Access Artículo
92 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A. (2016). Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
93 - Sanchez-Flores,A., Penazola,F., Carpinteyro-Ponce,J., Nazario-Yepiz,N., Abreu-Goodger,C., Machado,C.A., Markow,T.A. (2016). Genome Evolution in Three Species of Cactophilic Drosophila. G3: Genes, Genomes, Genetics, 6 (10), 3097-3105.
Open Access Artículo
94 - Vera-Ponce De Leon,A., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E. (2016). Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology, 7, 954.
Open Access Artículo
95 - Calva,E., Silva,C., Zaidi,M.B., Sanchez-Flores,A., Estrada,K., Silva,G.G., Soto-Jimenez,L.M., Wiesner,M., Fernandez-Mora,M., Edwards,R.A., Vinuesa,P. (2015). Complete Genome Sequencing of a Multidrug-Resistant and Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Genotype. Genome Announcements, 3 (3), e00663-15.
Open Access Artículo
96 - Dautt-Castro,M., Ochoa-Leyva,A., Contreras-Vergara,C.A., Pacheco-Sanchez,M.A., Casas-Flores,S., Sanchez-Flores,A., Kuhn,D.N., Islas-Osuna,M.A. (2015). Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science, 6.
Open Access Artículo
98 - Fontes-Perez,H., Olvera-Garcia,M., Chavez-Martinez,A., Rodriguez-Almeida,F.A., Arzola-Alvarez,C.A., Sanchez-Flores,A., Corral-Luna,A. (2015). Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements, 3 (6), art. no. e0129015.
Artículo
99 - Glover,L., Alsford,S., Baker,N., Turner,D.J., Sanchez-Flores,A., Hutchinson,S., Hertz-Fowler,C., Berriman,M., Horn,D. (2015). Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols, 10 (1), 106-133.
Open Access Artículo
100 - Gomez-Angulo,J., Vega-Alvarado,L., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Arrizon,J., Sanchez-Flores,A. (2015). Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements, 3 (4).
Open Access Artículo
101 - Olvera-Garcia,M., Fontes-Perez,H., Chavez-Martinez,A., Ruiz-Barrera O., Rodriguez-Almeida,F.A., Sanchez-Flores,A., Corral-Luna,A. (2015). Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements, 3 (6), art. no. e0128915.
Open Access Artículo
102 - Valencia-Morales,Mdel P., Zaina,S., Heyn,H., Carmona,F.J., Varol,N., Sayols,S., Condom,E., Ramirez-Ruz,J., Gomez,A., Moran,S., Lund,G., Rodriguez-Rios,D., Lopez-Gonzalez,G., Ramirez-Nava,M., de la Rocha C., Sanchez-Flores,A., Esteller,M. (2015). The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. BMC Medical Genomics, 8 (1), 85.
Open Access Artículo
103 - Vega-Alvarado,L., Gomez-Angulo,J., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Sanchez-Flores,A., Arrizon,J. (2015). High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements, 3 (3).
Open Access Artículo
104 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D. (2015). Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Artículo
105 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E. (2014). High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Open Access Artículo
106 - Ghaffari,N., Sanchez-Flores,A., Doan,R., Garcia-Orozco,K.D., Chen,P.L., Ochoa-Leyva,A., Lopez-Zavala,A.A., Carrasco,J.S., Hong,C., Brieba,L.G., Rudino-Pinera,E., Blood,P.D., Sawyer,J.E., Johnson,C.D., Dindot,S.V., Sotelo-Mundo,R.R., Criscitiello,M.F. (2014). Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports, 4, 7081.
Artículo
107 - Oliveira,P.D., Lima,F.M., Cruz,M.C., Ferreira,R.C., Sanchez-Flores,A., Cordero,E.M., Cortez,D.R., Ferreira,E.R., Briones,M.R., Mortara,R.A., Silveira,J.F., Bahia,D. (2014). Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution, 25, 157-165.
Artículo
108 - Reid,A.J., Blake,D.P., Ansari,H.R., Billington,K., Browne,H.P., Bryant,J.M., Dunn,M., Hung,S.S., Kawahara,F., Miranda-Saavedra,D., Malas,T., Mourier,T., Naghra,H., Nair,M., Otto,T.D., Rawlings,N.D., Rivailler,P., Sanchez-Flores,A., Sanders,M., Subramaniam,C., Tay,Y.L., Woo,Y., Wu,X., Barrell,B., Dear,P.H., Doerig,C., Gruber,A., Ivens,A.C., Parkinson,J., Rajandream,M.A., Shirley,M.W., Wan,K.L., Berriman,M., Tomley,F.M., Pain,A. (2014). Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research, 24, 1676-1685.
Revisión
109 - Sanchez-Flores,A., Abreu-Goodger,C. (2014). A Practical Guide to Sequencing Genomes and Transcriptomes. Current Topics in Medicinal Chemistry, 14 (3), 398-406.
Artículo
110 - Sotillo,J., Sanchez-Flores,A., Cantacessi,C., Harcus,Y., Pickering,D., Bouchery,T., Camberis,M., Tang,S.C., Giacomin,P., Mulvenna,J., Mitreva,M., Berriman,M., LeGros,G., Maizels,R.M., Loukas,A. (2014). Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular and Cellular Proteomics, 13 (10), 2736-2751. *
Revisión
111 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A. (2014). GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Open Access Artículo
113 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A. (2013). The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Artículo
114 - Alsford,S., Eckert,S., Baker,N., Glover,L., Sanchez-Flores,A., Leung,K.F., Turner,D.J., Field,M.C., Berriman,M., Horn,D. (2012). High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384), 232-236. *
Revisión
Artículo
116 - Alsford,S., Turner,D.J., Obado,S.O., Sanchez-Flores,A., Glover,L., Berriman,M., Hertz-Fowler,C., Horn,D. (2011). High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research, 21 (6), 915-924. *
Open Access Artículo
117 - Kikuchi,T., Cotton,J.A., Dalzell,J.J., Hasegawa,K., Kanzaki,N., McVeigh,P., Takanashi,T., Tsai,I.J., Assefa,S.A., Cock,P.J., Otto,T.D., Hunt,M., Reid,A.J., Sanchez-Flores,A., Tsuchihara,K., Yokoi,T., Larsson,M.C., Miwa,J., Maule,A.G., Sahashi,N., Jones,J.T., Berriman,M. (2011). Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens, 7 (9), e1002219. *
Internacional
119 - Fernandez-Garcia,M., Sanchez-Flores,A., Gonzalez,L.M., Barbas,C., Rey-Stolle,M.F., Sevilla,E., Garcia,A., Montero,E. (2021). Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 217-249.
Internacional
120 - Gonzalez,L.M., Sevilla,E., Fernandez-Garcia,M., Sanchez-Flores,A., Montero,E. (2021). Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 199-215.
Open Access Memoria in extenso
121 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Sanchez-Flores,F.A., Vega-Arreguin,J. (2018). Análisis del transcriptoma de chile cm-334 en el rompimiento de resistencia a Phytophthora capsici por Nacobbus aberrans. Memoria del Simposio Avances de Investigación Posgrado en Fitosanidad Colegio de Postgraduados 22 agosto 2018. 89-94, Chapingo: Colegio de Posgraduados.
Nacional
122 - Sanchez-Flores,F. (2016). Secuenciacion masiva en la era genomica. Genómica estructural y funcional en las enfermedades multifactoriales. Mexico: Leea Editorial.
Preprint
124 - Ozubek,S., Sanchez-Flores,A., Montero,E., Alzan,H., Suarez,C., Grande,R., Gil-Iglesias,A., Bastos,R., Aktas,M., Gonzalez,L.M. (2025). Comparative analysis of the EF-1a Intergenic Region in Babesia divergens isolates: Insights into TA Repeat Variation and Potential Regulatory Implications. bioRxiv, Preprint posted August 11.
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Open Access Nacional divulgacion
128 - Sanchez-Flores,F.A. (2025). ­¡Querida, encogí el genoma! ¿Cómo evoluciona la vida sintética?. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 11 (42).
Nacional divulgación
129 - Sanchez-Flores,F.A. (2025). Elección del Poder Judicial 2025: la ciudadanía entre la espada y la pared. Union de Morelos, 2 de abril.
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Preprint
133 - Singh,P., Vydyam,P., Fang,T., Kumar,M., Estrada,K., Grande,R., Sanchez-Flores,A., Gonzalez,L.M., Montero,E., Chakravarty,S., Lonardi,S., Berry,V,, Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Le Roch,K.G., Harb,O.S., Ben Mamoun,C. (2024). Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence. bioRxiv, Preprint posted January 18.
Open Access Preprint
134 - Araujo-Flores,C.L., Moreno-Perlin,T., Macias-Zamora,J.V., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,F.A., Calcaneo-Hernandez,G., Silva-Jimenez,H. (2023). Physiology and Genome Sequence Analysis of the Pyrene-Tolerant Marine Strain Rhodococcus Ruber Msa14. SSRN, Preprint posted 17 July.
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Preprint
136 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F. (2023). SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Authorea, Preprint.
Open Access Preprint
137 - Geiger,O., Sanchez-Flores,A., Espositi,M.D. (2022). On the bacterial ancestry of mitochondria: new insights with triangulated approaches. bioRxiv, Preprint posted May 16.
Open Access Preprint
138 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Boukadida,C., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M. (2022). Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico_. bioRxiv, Preprint posted August 10.
Preprint
139 - Garcia-Lopez,R., Rivera-Gutierrez,X., Rosales-Rivera,M., Taboada,B., Zarate,S., Munoz-Medina,J.E., Roche,B., Herrera-Estrella,A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F. (2022). SARS-CoV-2 BW.1, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Research Square, Preprint 21 Nov.
Open Access Preprint
140 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C. (2022). Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa. bioRxiv, Preprint posted May 09.
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Open Access preprint
143 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E. (2021). Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Medarxiv, Preprint posted Posted May 20.
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149 - Sanchez-Flores,F.A. (2020). La impresión 3D y sus múltiples aplicaciones. La Unión de Morelos, 20 de enero.
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150 - Sanchez-Flores,F.A. (2020). Los efectos del ejercicio en nuestro cerebro. La Unión de Morelos, 06 de enero.
Nacional divulgación
151 - Sanchez-Flores,F.A. (2020). La carrera hacia la vacuna contra COVID-19 (Primera Parte). La Unión de Morelos, 07 de septiembre.
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152 - Sanchez-Flores,F.A. (2020). La carrera hacia la vacuna contra COVID-19 (Segunda Parte). La Unión de Morelos, 14 de septiembre.
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153 - Sanchez-Flores,F.A. (2020). COVID19: A casi un año del inicio de la pandemia (Tercera parte). La Unión de Morelos, 07 de diciembre.
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Nacional divulgación
155 - Sanchez-Flores,F.A. (2020). La situación actual del COVID-19 en México y en el mundo. La Unión de Morelos, 09 de marzo.
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156 - Sanchez-Flores,F.A. (2020). CÓMO LA CIENCIA ABIERTA PUEDE AYUDAR AL MUNDO EN UNA EPIDEMIA. La Unión de Morelos, 03 de febrero.
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Nacional divulgación
159 - Sanchez-Flores,F.A. (2020). Los logros más importantes en ciencia y tecnología en el 2020. La Unión de Morelos, 28 de diciembre.
Nacional divulgación
160 - Sanchez-Flores,F.A. (2020). COVID19: A casi un año del inicio de la pandemia (Primera parte). La Unión de Morelos, 23 de noviembre.
Nacional divulgación
161 - Sanchez-Flores,F.A. (2020). COVID19: A casi un año del inicio de la pandemia (Segunda parte). La Unión de Morelos, 30 de noviembre.
Open Access Preprint
163 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes,P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado,E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez,A., Garces-Ayala,F., Gonzalez-Bonilla,C.R., Grajales-Muniz,C., Borja-Aburto,V.H, Barrera-Badillo,G, Lopez,S., Hernandez-Rivas,L, Perez-Padilla,R, Lopez Martinez,I, Avila-Rios,S, Ruiz-Palacios,G, Ramirez-Gonzalez,J.E, Arias,C.F. (2020). Genomic analysis of early SARS-CoV-2 strains introduced in Mexico. bioRxiv, Preprint posted May 30, 120402.
Open Access Divulgación
164 - Valderrama-Blanco,M.B., Sanchez-Flores,F.A., Burguete-Garcia,A.I., Orozco-Nunez,E. (2020). La colaboración Academia-Gobierno como un elemento importante para la atención temprana de la pandemia de COVID-19 en Cuernavaca. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 22, 18-22.
Open Access Preprint
165 - Velasquez,L.F., Canton,P.E., Sanchez-Flores,A., Bravo,A., Ceron,J. (2020). De novo transcriptome assembly of Premnotrypes vorax (Coleoptera: Curculionidae). Research Square, Preprint posted 17 Jan.
Nacional divulgación
168 - Sanchez-Flores,F.A. (2019). Logros y potencial de la Biotecnología en México. La Unión de Morelos, 07 de octubre.
Nacional divulgación
169 - Sanchez-Flores,F.A. (2019). La ciencia y la belleza. ¿Ser atractivos nos da ventajas?. La Unión de Morelos, 09 de diciembre.
Nacional divulgación
170 - Sanchez-Flores,F.A. (2019). Animales fabulosos: Estrategias de supervivencia en la naturaleza. La Unión de Morelos, 16 de septiembre.
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171 - Sanchez-Flores,F.A. (2019). Los logros más importantes en ciencia y tecnología del 2019. La Unión de Morelos, 30 de diciembre.
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Open Access Divulgación
176 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
Open Access Divulgación
177 - Sanchez-Flores,A. (2015). Las nuevas tecnologías y el cómputo nos ayudan a estudiar detalladamente a los patógenos. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 3-4.
Open Access Divulgación
178 - Sanchez-Flores,A. (2015). Unidad de Secuenciación Masiva y Bioinformática, a la vanguardia de la ciencia. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 23-24.
News Item
179 - Sanchez-Flores,A. (2012). Sequencing parasite populations. Nature Reviews Microbiology, 10 (2), 85. *
News Item
180 - Sanchez-Flores,A. (2011). A new piece of the eukaryotic puzzle. Nature Reviews Microbiology, 9 (11), 769. *
News Item
181 - Sanchez-Flores,A. (2011). A 'clap' for in silico studies. Nature Reviews Microbiology, 9 (1), 7. *
182 - Sanchez Flores, Fidel Alejandro (2007). Analisis de perfiles de entropia en familias estructurales de proteinas . Instituto de Biotecnologia, Doctor en Ciencias Bioquimicas, UNAM.
183 - Sanchez Flores, Fidel Alejandro (2001). Expresion recombinante de la cloro de la cloroperoxidasa de Caldariomy fumago. Instituto de Investigaciones Biomedicas, Licenciatura en Investigacion Biomedica Basica, UNAM. *
Open Access Artículo
184 - Godoy-Lozano,E.E., Raggi,L., Escobar-Zepeda,A., Adaya,L., Cuervo-Amaya,D.H., Gracia,A., Sanchez-Flores,A., Diaz-Camino,C., Pardo-Lopez,L.. Enrichment hydrocarbon-degrading bacterial communities from the southern Gulf of Mexico in long-term stored sediments. Biodegradation, 37 (2), 45.
Open Access Artículo
185 - Ozubek,S., Sanchez-Flores,A., Montero,E., Alzan,H., Suarez,C.E., Grande,R., Gil,A., Aktas,M., Gonzalez,L.M.. Comparative analysis of the EF-1a Intergenic Region in Babesia divergens isolates: Insights into TA Repeat Variation and Potential Regulatory Implications. International Journal of Molecular Sciences, 27 (5), 2222.
Open Access Artículo
186 - Singh,P., Estrada,K., Gonzalez,L.M., Grande,R., Sanchez-Prieto,S., Cornillot,E., Harb,O., Sanchez-Flores,A., Montero,E., Le Roch,K.G., Lonardi,S., Mamoun,C.B.. Babesia hegotelforum sp. nov., a zoonotic Babesia species previously referred to as Babesia sp. MO1. Emerging Microbes & Infections, 15 (1), 2637280.
Artículo
187 - Taboada,B., Zarate,S., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Vazquez-Perez,J.A., Salas-Lais,A.G., Zarate,A., Arias,C.F.. Genomic Diversity and Geographic Distribution of SARS-CoV-2 in Mexico: Insights From 4 Years of Genomic Surveillance. Archives of Medical Research, 57 (2), 103289.
Open Access Artículo
188 - Calderon-Ezquerro,M.C., Brunner-Mendoza,C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C., Ponce de Leon,A., Ortega-Rosas,C.I.. Genetic sequencing of the airborne fungal spectrum and air quality at a public hospital in Mexico City. PLOS Global Public Health, 5 (6), e0004784.
Open Access Artículo
189 - Lopez-Teros,M., Avila-Galicia,K.E., Librado-Osorio,R., Jimenez-Jacinto,V., Garcia-Alvarez,J.A., Hernandez-Montes,G., Sanchez-Flores,A., Alarcon-Aguilar,A., Luna-Lopez,A., Konigsberg,M.. Palmitate-Induced Primary Rat Senescent Astrocytes Exhibit Higher Inflammatory Activity and a Distinct Transcriptomic Profile Compared to Reactive Astrocytes. Journal of Neurochemistry, 169 (7), e70164.
Open Access Artículo
190 - Martinez-Garcia,G., Estrada,K., Lira-Amaya,J.J., Santamaria-Epinosa,R.M., Lopez-Arellano,M.E., Sciutto-Conde,E.L., Rojas-Martinez,C., Alvarez-Martinez,J.A., Sanchez-Flores,A., Figueroa-Millan,J.V. Comparative Analysis of Immune Response Genes Induced by a Virulent or Attenuated Strain of Babesia bigemina. International Journal of Molecular Sciences, 26 (2), 487.
Open Access Artículo
Open Access Artículo
192 - Zarate,S., Taboada,B., Torres-Rivera,K., Bautista-Carbajal,P., Garcia-Leon,M.L., Tabla-Orozco,V., Juarez-Tobias,M.S., Noyola,D.E., Martinez-Arce,P.A., Espinosa-Sotero,M.D., Martinez-Aguilar,G., Rojas-Larios,F., Sanchez-Flores,A., Arias,C.F., Wong-Chew,R.M.. Circulation of RSV Subtypes A and B Among Mexican Children During the 2021-2022 and 2022-2023 Seasons. Pathogens, 14 (10), 996.
Preprint
193 - Ozubek,S., Sanchez-Flores,A., Montero,E., Alzan,H., Suarez,C., Grande,R., Gil-Iglesias,A., Bastos,R., Aktas,M., Gonzalez,L.M.. Comparative analysis of the EF-1a Intergenic Region in Babesia divergens isolates: Insights into TA Repeat Variation and Potential Regulatory Implications. bioRxiv, Preprint posted August 11.
Nacional divulgación
nacional divulgación
Nacional divulgación
Open Access Nacional divulgacion
197 - Sanchez-Flores,F.A.. ­¡Querida, encogí el genoma! ¿Cómo evoluciona la vida sintética?. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 11 (42).
Nacional divulgación
198 - Sanchez-Flores,F.A.. Elección del Poder Judicial 2025: la ciudadanía entre la espada y la pared. Union de Morelos, 2 de abril.
Open Access Protocolo
Open Access Artículo
200 - Brunner-Mendoza,C., Calderon-Ezquerro,M.C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C.. Diversity and Composition of the Airborne Fungal Community in Mexico City with a Metagenomic Approach. Microorganisms, 12 (12), 2632.
Open Access Artículo
201 - Calderon-Ezquerro,M.C., Ponce de Leon,A.A., Brunner-Mendoza,C., Guerrero-Guerra,C.C., Sanchez-Flores,A., Salinas-Peralta,I., Lopez-Jacome,L.E., Colin-Castro,C.A, Martinez-Zavaleta,M.G.. Assessment of airborne bacteria from a public health institution in Mexico City. PLOS Global Public Health, 4 (11), e0003672.
Artículo
202 - Embarcadero-Jimenez,S., Araujo-Palomares,C.L., Moreno-Perlin,T., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,A., Calcaneo-Hernandez,G., Silva-Jimenez,H.. Physiology and comparative genomics of the haloalkalitolerant and hydrocarbonoclastic marine strain Rhodococcus ruber MSA14. Archives of Microbiology, 206 (7), 328.
Open Access Artículo
203 - Garcia-Lopez,R., Taboada,B., Zarate,S., Munoz-Medina,J.E., Salas-Lais,A.G., Herrera-Estrella,A., Boukadida,C., Vazquez-Perez,J.A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F.. Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover. Microbial Genomics, 10 (3), 001220.
Open Access Artículo
Open Access Artículo
Open Access Artículo
206 - Santamaria,R.M., Estrada,K., Lopez,M.E., Rojas,E., Martinez,G., Alcala,Y., Rojas,C., Alvarez,J.A., Lira,J.J., Santamaria,T.V., Sanchez-Flores,A., Figueroa,J.V.. Comparative Transcriptome Analysis of Babesia bigemina Attenuated Vaccine and Virulent Strains of Mexican Origin. Vaccines (Basel), 12 (3), 309.
Open Access Artículo
207 - Singh,P., Vydyam,P., Fang,T., Estrada,K., Gonzalez,L.M., Grande,R., Kumar,M., Chakravarty,S., Berry,V., Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Harb,O., Sanchez-Flores,A., Montero,E., Le Roch,K.G., Lonardi,S., Mamoun,C.B.. Insights Into the Evolution, Virulence and Speciation of Babesia MO1 and Babesia divergens Through Multiomics Analyses. Emerging Microbes and Infections, 13 (1), 2386136.
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Nacional divulgacion
Preprint
210 - Singh,P., Vydyam,P., Fang,T., Kumar,M., Estrada,K., Grande,R., Sanchez-Flores,A., Gonzalez,L.M., Montero,E., Chakravarty,S., Lonardi,S., Berry,V,, Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Le Roch,K.G., Harb,O.S., Ben Mamoun,C.. Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence. bioRxiv, Preprint posted January 18.
Open Access Artículo
211 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Boukadida,C., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M.. Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico. Elife, 12, e82069.
Open Access Artículo
Open Access Artículo
213 - Geiger,O., Sanchez-Flores,A., Padilla-Gomez,J., Degli-Esposti M.. Multiple approaches of cellular metabolism define the bacterial ancestry of mitochondria. Science Advances, 9 (32), eadh0066.
Open Access Artículo
214 - Loza,A., Wong-Chew,R.M., Jimenez-Corona,M.E., Zarate,S., Lopez,S., Ciria,R., Palomares,D., Garcia-Lopez,R., Isa,P., Taboada,B., Rosales,M., Boukadida,C., Herrera-Estrella,A., Mojica,N.S., Rivera-Gutierrez,X., Munoz-Medina,J.E., Salas-Lais,A.G., Sanchez-Flores,A., Vazquez-Perez,J.A., Arias,C.F., Gutierrez-Rios,R.M.. Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health, 10, 1050673.
Open Access Articulo
215 - Murga-Garrido,S.M., Ulloa-Perez,E.J., Diaz-Benitez,C.E, Orbe-Orihuela,Y.C, Cornejo-Granados,F., Ochoa-Leyva,A, Sanchez-Flores,A, Cruz,M, Castaneda-Marquez,A.C, Plett-Torres,T, Burguete-Garcia,A.I., Lagunas-Martinez,A.. Virulence Factors of the Gut Microbiome Are Associated with BMI and Metabolic Blood Parameters in Children with Obesity. Microbiology Spectrum, 11 (2), e0338222.
Artículo
216 - Nabor-Romero,O., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Silva-Valenzuela,M., Vega-Arreguin,J., Sanchez-Flores,A., Rojas-Martinez,R.I. Transcriptional alterations induced by Nacobbus aberrans in interaction with chili pepper CM-334 and Phytophthora capsici. Physiological and Molecular Plant Pathology, 123, 101942.
Open Access Artículo
Open Access Artículo
218 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B.. Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology, 8 (5), 845-859.
Open Access Artículo
219 - Taboada,B.I., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F.. SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Microbial Genomics, 9 (12), 001120.
Open Access Artículo
Open Access Artículo
221 - Zarate,S., Taboada,B., Rosales-Rivera,M., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Selem-Mojica N., Salas-Lais,A.G., Vazquez-Perez,J.A., Cabrera-Gaytan,D.A., Fernandes-Matano,L., Uribe-Noguez,L.A., Chale-Dzul,J.B., Maldonado Meza,B.I., Mejia-Nepomuceno,F., Perez-Padilla,R., Gutierrez-Rios,R.M., Loza,A, Roche,B, Lopez,S, Arias,C.F. Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses, 15 (1), 243.
Open Access Preprint
222 - Araujo-Flores,C.L., Moreno-Perlin,T., Macias-Zamora,J.V., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,F.A., Calcaneo-Hernandez,G., Silva-Jimenez,H.. Physiology and Genome Sequence Analysis of the Pyrene-Tolerant Marine Strain Rhodococcus Ruber Msa14. SSRN, Preprint posted 17 July.
Open Access Nacional divulgacion
Preprint
224 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F.. SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Authorea, Preprint.
Open Access Artículo
225 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P.. The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology, 12, 876839.
Open Access Artículo
226 - Boukadida,C., Taboada,B., Escalera-Zamudio,M., Isa,P., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Rincon-Rubio,A., Matias-Florentino,M., Paz-Juarez,H.E., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Hernandez-Rivas,L., Lopez,S., Lopez-Martinez,I, Avila-Rios,S., Arias,C.F.. Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum, 10 (1), e01249-21.
Artículo
227 - Corona-Herrera,G.A., Navarrete-Ramirez,P., Sanchez-Flores,F.A., Jimenez-Jacinto,V., Martinez-Palacios,C.A., Palomera-Sanchez,Z., Volkoff,H., Martinez-Chavez,C.C.. Shining light on the transcriptome: Molecular regulatory networks leading to a fast-growth phenotype by continuous light in an environmentally sensitive teleost (Atherinopsidae). Journal of photochemistry and photobiology.B, Biology, 235, 112550.
Open Access Revisión
228 - Garcia-Lopez,R., Laresgoiti-Servitje,E., Lemus-Martin,R., Sanchez-Flores,A., Sanders-Velez,C.. The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. MBio, 13 (5), e0106021.
Open Access Artículo
229 - Isa,P., Taboada,B., Garcia-Lopez,R., Boukadida,C., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Hernandez-Teran,A., Romero-Espinoza,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Lopez,S., Hernandez-Rivas,L., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F.. Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. BMC Infectious Diseases, 22 (1), 792.
Open Access Artículo
Open Access Artículo
231 - Murga-Garrido,S.M., Orbe-Orihuela,Y.C., Diaz-Benitez,C.E., Castaneda-Marquez,A.C., Cornejo-Granados,F., Ochoa-Leyva,A., Sanchez-Flores,A., Cruz,M., Burguete-Garcia,A.I., Lagunas-Martinez,A.. Alterations of the Gut Microbiome Associated to Methane Metabolism in Mexican Children with Obesity. Children, 9 (2), 148.
Open Access Artículo
232 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Vega-Arreguin,J., Ochoa-Martinez,D., Sanchez-Flores,A., Romo-Castillo,M.. Transcriptomic Analysis of the CM-334/P. capsici/N. aberrans Pathosystem to Identify Components in Plant Resistance and Resistance-Breaking Responses. International Journal of Plant Biology, 13 (2), 151-162.
Artículo
233 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I. Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research, 53 (4), 407-415.
Open Access Carta nacional
234 - Perelman,C., Fastlicht,A., Sanchez-Flores,A., Wegman-Ostrosky,T.. Superspreading event of Covid-19 in adolescents: is there a difference between the vaccinated and the unvaccinated?. Salud Publica de Mexico, 64 (5, sept-oct), 446-447.
Open Access Artículo
Open Access Artículo
Open Access Artículo
237 - Sanchez-Correa,M.D.S., Isidra-Arellano,M.C., Pozas-Rodriguez,E.A., Reyero-Saavedra,M.D.R., Morales-Salazar,A., Del Castillo,S.M.L., Sanchez-Flores,A., Jimenez-Jacinto,V., Reyes,J.L., Formey,D., Valdes-Lopez,O.. Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis. Frontiers in Plant Science, 13, 1034419.
Artículo
Open Access Artículo
239 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F.. Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses, 14 (6), 1165.
Open Access Artículo
240 - Vazquez-Chacon,C.A., Rodriguez-Gaxiola,F.J., Sanchez-Flores,A., Montano,S., Bello-Rios,C., Fonseca-Coronado,S., Lopez-Carrera,C.F., Martinez-Guarneros,A., Parra-Unda,R., Garcia-Magallanes,N., Arambula-Meraz,E., Escobar-Gutierrez,A., Cruz-Rivera,M., Lopez-Duran,P.A.. Intra-host genetic population diversity: Role in emergence and persistence of drug resistance among Mycobacterium tuberculosis complex minor variants. Infection, Genetics and Evolution, 101, 105288.
Open Access Artículo
241 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F.. The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum, 10 (2), e0224021.
Open Access Preprint
242 - Geiger,O., Sanchez-Flores,A., Espositi,M.D.. On the bacterial ancestry of mitochondria: new insights with triangulated approaches. bioRxiv, Preprint posted May 16.
Open Access Preprint
243 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Boukadida,C., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M.. Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico_. bioRxiv, Preprint posted August 10.
Preprint
244 - Garcia-Lopez,R., Rivera-Gutierrez,X., Rosales-Rivera,M., Taboada,B., Zarate,S., Munoz-Medina,J.E., Roche,B., Herrera-Estrella,A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F.. SARS-CoV-2 BW.1, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Research Square, Preprint 21 Nov.
Open Access Preprint
245 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C.. Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa. bioRxiv, Preprint posted May 09.
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248 - Arevalos-Sanchez,M.M., Maynez-Perez,A.O., Rodriguez-Almeida,F.A., Martinez-Quintana,J.A., Sanchez-Flores,F.A., Felix-Portillo,M., Chavez-Martinez,A., Olvera-Garcia,M.E., Ruiz-Barrera,O., Corral-Luna,A.. In vitro assessment of two novel Cellulases from Trabulsiella odontotermitis for agricultural waste utilization. BMC Biotechnology, 21 (1), 26.
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249 - Barona-Gomez,F., Delaye,L., Diaz-Valenzuela,E., Plisson,F., Cruz-Perez,A., Diaz-Sanchez,M., Garcia-Sepulveda,C.A., Sanchez-Flores,A., Perez-Abreu,R., Valencia-Valdespino,F.J., Vega-Megana,N., Munoz-Valle,J.F., Garcia-Gonzalez,O.P., Bernal-Silva,S., Comas-Garcia,A., Cibrian-Jaramillo,A.. Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics, 7 (11), 000684.
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250 - Escobar-Zepeda,A., Rosas-Escobar,P., Marquez-Valdelamar,L., de la Torre,P., Partida-Martinez,L.P., Remegaldo,R., Sanchez-Flores,A., Vergara,F.. Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. BMC Research Notes, 14 (1), 333.
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251 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C.. Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, 105 (9).
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252 - Mora-Gonzalez,P.C., Espinosa-Luna,G., Ramirez-Higuera,A., Pena-Montes,C., Valerio-Alfaro,G., Sanchez-Flores,A, Quintana-Castro,R., Sanchez-Otero,M.G., Oliart-Ros,R.M.. Metagenomic Approach to Bacterial Diversity and Lipolytic Enzyme's Genes from a Steam Soil of Los Humeros Geothermal Field (Puebla, México). Geomicrobiology Journal, 38 (4), 304-314.
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253 - Orta,A.H., Bush,S.J., Gutierrez-Mariscal,M., Castro-Obregon,S., Jaimes-Hoy,L., Grande,R., Vazquez,G., Gorostieta-Salas,E, Martinez-Pacheco,M., Diaz-Barba,K., Cornejo-Paramo,P., Sanchez,A., Tzekely,T., Urrutia,A.O., Cortez,D.. Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology, 4, 1418.
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254 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E.. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology, 166, 3173-3177.
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255 - Taboada-Ramirez,B., Zarate,S., Isa,P., Boukadida,C., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramirez-Gonzalez,J.E., Comas-Garcia,A., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Verleyen,J., Barrera-Badillo,G., Hernandez-Rivas,L., Mejia-Nepomuceno,F., Martinez-Orozco,J.A., Becerril-Vargas,E., Lopez,S., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F.. Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses, 13 (11), 2161.
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256 - Valencia-Morales,M.D.P., Sanchez-Flores,A., Colin-Castelan,D., Alvarado-Caudillo,Y., Fragoso-Bargas,N., Lopez-Gonzalez,G., Pena-Lopez,T., Ramirez-Nava,M., de la Rocha,C., Rodriguez-Rios,D., Lund,G., Zaina,S.. Somatic genetic mosaicism in the apolipoprotein E-null mouse aorta. Thrombosis and Haemostasis, 121 (11), 1541-1553.
Internacional
257 - Fernandez-Garcia,M., Sanchez-Flores,A., Gonzalez,L.M., Barbas,C., Rey-Stolle,M.F., Sevilla,E., Garcia,A., Montero,E.. Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 217-249.
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258 - Gonzalez,L.M., Sevilla,E., Fernandez-Garcia,M., Sanchez-Flores,A., Montero,E.. Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 199-215.
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260 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E.. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Medarxiv, Preprint posted Posted May 20.
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267 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S.. Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
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269 - Hernandez-Valle,J., Sanchez-Flores,A., Poggio,S., Dreyfus,G., Camarena,L.. The CtrA regulon of Rhodobacter sphaeroides favors adaptation to a particular life style. Journal of Bacteriology, 202 (7), 00678-19.
Open Access Artículo
270 - Nabor-Romero,O., Rojas-Martinez,R.I., Ochoa-Martinez,D.L., Vega-Arreguin,J., Sanchez-Flores,F.A., Zavaleta-Mejia,E. Avances en el conocimiento sobre el rompimiento de la resistencia de chile cm-334 (capsicum annuum l.) A phytophthora capsici por nacobbus aberrans. Nematropica, 50 (1), 45-58.
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274 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez A., Garces-Ayala F., Gonzalez-Bonilla,C.R., Grajales-Muniz C., Borja-Aburto,V, Barrera-Badillo G., Lopez,S., Hernandez-Rivas L., Perez-Padilla,R., Lopez-Martinez,I, Avila-Rios,S., Ruiz-Palacios,G., Ramirez-Gonzalez,J.E., Arias,C.F.. Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology, 94 (18), e01056-20.
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275 - Sanchez-Flores,F.A.. La impresión 3D y sus múltiples aplicaciones. La Unión de Morelos, 20 de enero.
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276 - Sanchez-Flores,F.A.. Los efectos del ejercicio en nuestro cerebro. La Unión de Morelos, 06 de enero.
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289 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes,P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado,E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez,A., Garces-Ayala,F., Gonzalez-Bonilla,C.R., Grajales-Muniz,C., Borja-Aburto,V.H, Barrera-Badillo,G, Lopez,S., Hernandez-Rivas,L, Perez-Padilla,R, Lopez Martinez,I, Avila-Rios,S, Ruiz-Palacios,G, Ramirez-Gonzalez,J.E, Arias,C.F.. Genomic analysis of early SARS-CoV-2 strains introduced in Mexico. bioRxiv, Preprint posted May 30, 120402.
Open Access Divulgación
290 - Valderrama-Blanco,M.B., Sanchez-Flores,F.A., Burguete-Garcia,A.I., Orozco-Nunez,E.. La colaboración Academia-Gobierno como un elemento importante para la atención temprana de la pandemia de COVID-19 en Cuernavaca. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 22, 18-22.
Open Access Preprint
291 - Velasquez,L.F., Canton,P.E., Sanchez-Flores,A., Bravo,A., Ceron,J.. De novo transcriptome assembly of Premnotrypes vorax (Coleoptera: Curculionidae). Research Square, Preprint posted 17 Jan.
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293 - Garcia-Lopez,G., Avila-Gonzalez,D., Garcia-Castro,I.L., Flores-Herrera,H., Molina-Hernandez,A., Portillo,W., Diaz-Martinez,N.E., Sanchez-Flores,A., Verleyen,J., Merchant-Larios,H., Diaz,N.F.. Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research, 375 (1), 31-41.
Open Access Artículo
294 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
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Open Access Artículo
296 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S.. De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
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299 - Sanchez-Flores,F.A.. Logros y potencial de la Biotecnología en México. La Unión de Morelos, 07 de octubre.
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307 - Barreto-Curiel, F., Ramirez-Puebla, S. T., Ringo, E., Escobar-Zepeda, A., Godoy-Lozano, E., Vazquez-Duhalt, R., Sanchez-Flores, A., Viana, M. T.. Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi. Animal Feed Science and Technology, 245, 91-103.
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308 - Carrillo-Tapia, E., Garcia-Garcia, E., Herrera-Gonzalez, N.E., Yamazaki-Nakashimada, M.A., Staines-Boone, A.T., Segura-Mendez, N.H., Scheffler-Mendoza, S.C., Farrill-Romanillos, O., Gonzalez-Serrano, M.E., Rodriguez-Alba, J.C., Santos-Argumedo, L., Berron-Ruiz, L., Sanchez-Flores, A., Lopez-Herrera, G.. Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology, 14 (1), 83-93.
Open Access Artículo
309 - Contreras-Castro, L., Maldonado, L.A., Quintana, E.T., Raggi, L., Sanchez-Flores, A.. Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Microbiology Resource Announcements, 6 (21), e00436-18.
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311 - Garcia, C.F., Pedrini, N., Sanchez-Paz, A., Reyna-Blanco, C.S., Lavarias, S., Muhlia-Almazan, A., Fernandez-Gimenez, A., Laino, A., de-la-Re-Vega, E., Lukaszewicz, G., Lopez-Zavala, A.A., Brieba, L.G., Criscitello, M.F., Carrasco-Miranda, J.S., Garcia-Orozco, K.D., Ochoa-Leyva, A., Rudino-Pinera, E., Sanchez-Flores, A., Sotelo-Mundo, R.R.. De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics, 37, 74-81.
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314 - Munoz-Medina,J.E., Garcia-Knight,M.A., Sanchez-Flores,A., Monroy-Munoz,I.E., Grande,R., Esbjornsson,J., Santacruz-Tinoco,C.E., Gonzalez-Bonilla,C.R.. Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. PLoS ONE, 13 (12), e0209292.
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315 - Olvera-Garcia, M., Sanchez-Flores, A., Quirasco, Baruch M.. Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology, 102 (5), 102490, 2251-2267.
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316 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M.. Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.
Open Access Memoria in extenso
317 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Sanchez-Flores,F.A., Vega-Arreguin,J.. Análisis del transcriptoma de chile cm-334 en el rompimiento de resistencia a Phytophthora capsici por Nacobbus aberrans. Memoria del Simposio Avances de Investigación Posgrado en Fitosanidad Colegio de Postgraduados 22 agosto 2018. 89-94, Chapingo: Colegio de Posgraduados.
Open Access Artículo
318 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A.. Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.
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320 - Sandoval-Azuara, S.E., Perea-Jacobo, R., Muniz-Salazar, R., Robbe-Austerman, S., Perera-Ortiz, A., Lopez-Valencia, G., Bravo, D.M., Sanchez-Flores, A., Miranda-Guzman, D., Flores-Lopez, C.A., Zenteno-Cuevas, R., Laniado-Laborin, R., Lafarga de la, Cruz F., Stuber, T.P.. Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases, 63, 48-56.
Open Access Artículo
321 - Titulaer, M., Melgoza-Castillo, A., Panjabi, A.O., Sanchez-Flores, A., Martinez-Guerrero, J.H., Macias-Duarte, A., Fernandez, J.A.. Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. PLoS ONE, 12 (12), e0189695.
Open Access Divulgación
322 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
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325 - Hunt,V.L., Tsai,I.J., Coghlan,A., Reid,A.J., Holroyd,N., Foth,B.J., Tracey,A., Cotton,J.A., Stanley,E.J., Beasley,H., Bennett,H.M., Brooks,K., Harsha,B., Kajitani,R., Kulkarni,A., Harbecke,D., Nagayasu,E., Nichol,S., Ogura,Y., Quail,M.A., Randle,N., Xia,D., Brattig,N.W., Soblik,H., Ribeiro,D.M., Sanchez-Flores,A., Hayashi,T., Itoh,T., Denver,D.R., Grant,W., Stoltzfus,J.D., Lok,J.B., Murayama,H., Wastling,J., Streit,A., Kikuchi,T., Viney,M., Berriman,M.. The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48, 299-307.
Open Access Artículo
326 - Ramirez-Puebla,S.T., Ormeno-Orrillo,E., Vera-Ponce de Leon A., Lozano,L., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E.. Genomes of Candidatus Wolbachia bourtzisii wDacA and Candidatus Wolbachia pipientis wDacB from the Cochineal Insect Dactylopius coccus (Hemiptera: Dactylopiidae). G3: Genes, Genomes, Genetics, 6 (10), 3343-3349.
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327 - Rodriguez-Anaya,L.Z., Ibarra-Gamez,J.C., Lares-Villa,F., Casillas-Hernandez,R., Sanchez-Flores,A., Gonzalez-Galaviz,J.R.. Analysis of repeated compound units in ORF94 of white spot syndrome virus isolated from Litopenaeus vannamei from outbreak and non-outbreak shrimp farms in Sonora, Mexico. Latin American Journal of Aquatic Research, 44 (4), 850-854.
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328 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A.. Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
329 - Sanchez-Flores,A., Penazola,F., Carpinteyro-Ponce,J., Nazario-Yepiz,N., Abreu-Goodger,C., Machado,C.A., Markow,T.A.. Genome Evolution in Three Species of Cactophilic Drosophila. G3: Genes, Genomes, Genetics, 6 (10), 3097-3105.
Open Access Artículo
330 - Vera-Ponce De Leon,A., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E.. Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology, 7, 954.
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331 - Sanchez-Flores,F.. Secuenciacion masiva en la era genomica. Genómica estructural y funcional en las enfermedades multifactoriales. Mexico: Leea Editorial.
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332 - Calva,E., Silva,C., Zaidi,M.B., Sanchez-Flores,A., Estrada,K., Silva,G.G., Soto-Jimenez,L.M., Wiesner,M., Fernandez-Mora,M., Edwards,R.A., Vinuesa,P.. Complete Genome Sequencing of a Multidrug-Resistant and Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Genotype. Genome Announcements, 3 (3), e00663-15.
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333 - Dautt-Castro,M., Ochoa-Leyva,A., Contreras-Vergara,C.A., Pacheco-Sanchez,M.A., Casas-Flores,S., Sanchez-Flores,A., Kuhn,D.N., Islas-Osuna,M.A.. Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science, 6.
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335 - Fontes-Perez,H., Olvera-Garcia,M., Chavez-Martinez,A., Rodriguez-Almeida,F.A., Arzola-Alvarez,C.A., Sanchez-Flores,A., Corral-Luna,A.. Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements, 3 (6), art. no. e0129015.
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336 - Glover,L., Alsford,S., Baker,N., Turner,D.J., Sanchez-Flores,A., Hutchinson,S., Hertz-Fowler,C., Berriman,M., Horn,D.. Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols, 10 (1), 106-133.
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337 - Gomez-Angulo,J., Vega-Alvarado,L., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Arrizon,J., Sanchez-Flores,A.. Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements, 3 (4).
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338 - Olvera-Garcia,M., Fontes-Perez,H., Chavez-Martinez,A., Ruiz-Barrera O., Rodriguez-Almeida,F.A., Sanchez-Flores,A., Corral-Luna,A.. Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements, 3 (6), art. no. e0128915.
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339 - Valencia-Morales,Mdel P., Zaina,S., Heyn,H., Carmona,F.J., Varol,N., Sayols,S., Condom,E., Ramirez-Ruz,J., Gomez,A., Moran,S., Lund,G., Rodriguez-Rios,D., Lopez-Gonzalez,G., Ramirez-Nava,M., de la Rocha C., Sanchez-Flores,A., Esteller,M.. The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. BMC Medical Genomics, 8 (1), 85.
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340 - Vega-Alvarado,L., Gomez-Angulo,J., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Sanchez-Flores,A., Arrizon,J.. High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements, 3 (3).
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341 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D.. Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Divulgación
342 - Sanchez-Flores,A.. Las nuevas tecnologías y el cómputo nos ayudan a estudiar detalladamente a los patógenos. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 3-4.
Open Access Divulgación
343 - Sanchez-Flores,A.. Unidad de Secuenciación Masiva y Bioinformática, a la vanguardia de la ciencia. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 23-24.
Open Access Artículo
344 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E.. High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Open Access Artículo
345 - Ghaffari,N., Sanchez-Flores,A., Doan,R., Garcia-Orozco,K.D., Chen,P.L., Ochoa-Leyva,A., Lopez-Zavala,A.A., Carrasco,J.S., Hong,C., Brieba,L.G., Rudino-Pinera,E., Blood,P.D., Sawyer,J.E., Johnson,C.D., Dindot,S.V., Sotelo-Mundo,R.R., Criscitiello,M.F.. Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports, 4, 7081.
Artículo
346 - Oliveira,P.D., Lima,F.M., Cruz,M.C., Ferreira,R.C., Sanchez-Flores,A., Cordero,E.M., Cortez,D.R., Ferreira,E.R., Briones,M.R., Mortara,R.A., Silveira,J.F., Bahia,D.. Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution, 25, 157-165.
Artículo
347 - Reid,A.J., Blake,D.P., Ansari,H.R., Billington,K., Browne,H.P., Bryant,J.M., Dunn,M., Hung,S.S., Kawahara,F., Miranda-Saavedra,D., Malas,T., Mourier,T., Naghra,H., Nair,M., Otto,T.D., Rawlings,N.D., Rivailler,P., Sanchez-Flores,A., Sanders,M., Subramaniam,C., Tay,Y.L., Woo,Y., Wu,X., Barrell,B., Dear,P.H., Doerig,C., Gruber,A., Ivens,A.C., Parkinson,J., Rajandream,M.A., Shirley,M.W., Wan,K.L., Berriman,M., Tomley,F.M., Pain,A.. Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research, 24, 1676-1685.
Revisión
348 - Sanchez-Flores,A., Abreu-Goodger,C.. A Practical Guide to Sequencing Genomes and Transcriptomes. Current Topics in Medicinal Chemistry, 14 (3), 398-406.
Artículo
349 - Sotillo,J., Sanchez-Flores,A., Cantacessi,C., Harcus,Y., Pickering,D., Bouchery,T., Camberis,M., Tang,S.C., Giacomin,P., Mulvenna,J., Mitreva,M., Berriman,M., LeGros,G., Maizels,R.M., Loukas,A.. Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular and Cellular Proteomics, 13 (10), 2736-2751. *
Revisión
350 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A.. GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Open Access Revisión
Open Access Artículo
352 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A.. The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Artículo
353 - Alsford,S., Eckert,S., Baker,N., Glover,L., Sanchez-Flores,A., Leung,K.F., Turner,D.J., Field,M.C., Berriman,M., Horn,D.. High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384), 232-236. *
Revisión
News Item
355 - Sanchez-Flores,A.. Sequencing parasite populations. Nature Reviews Microbiology, 10 (2), 85. *
Artículo
356 - Alsford,S., Turner,D.J., Obado,S.O., Sanchez-Flores,A., Glover,L., Berriman,M., Hertz-Fowler,C., Horn,D.. High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research, 21 (6), 915-924. *
Open Access Artículo
357 - Kikuchi,T., Cotton,J.A., Dalzell,J.J., Hasegawa,K., Kanzaki,N., McVeigh,P., Takanashi,T., Tsai,I.J., Assefa,S.A., Cock,P.J., Otto,T.D., Hunt,M., Reid,A.J., Sanchez-Flores,A., Tsuchihara,K., Yokoi,T., Larsson,M.C., Miwa,J., Maule,A.G., Sahashi,N., Jones,J.T., Berriman,M.. Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens, 7 (9), e1002219. *
News Item
358 - Sanchez-Flores,A.. A new piece of the eukaryotic puzzle. Nature Reviews Microbiology, 9 (11), 769. *
News Item
359 - Sanchez-Flores,A.. A 'clap' for in silico studies. Nature Reviews Microbiology, 9 (1), 7. *
362 - Sanchez Flores, Fidel Alejandro. Expresion recombinante de la cloro de la cloroperoxidasa de Caldariomy fumago. Instituto de Investigaciones Biomedicas, Licenciatura en Investigacion Biomedica Basica, UNAM. *
Dr. Fidel Alejandro Sanchez Flores

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