Dr. Gabriel Isaac Corkidi Blanco
Investigador Titular C Tiempo Completo
Visión por computadora y análisis de imágenes
Número de registros: 8
- Activos
- Vencidos
- Análisis tridimensional del batido flagelar del espermatozoide humano activado e hiperactivado: desarrollo de nuevos métodos y algoritmos de rastreo y análisis en microscopía tridimensional, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2022 - 2024
- Análisis de imágenes médicas para la detección y el seguimiento de covid-19, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 1900
- Distribución local del ca2+ intracelular en el flagelo del espermatozoide humano activado e hiperactivado batiendo tridimensionalmente: desarrollo de nuevos algoritmos de microscopía tridimensional de alta velocidad y sensibilidad, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2016 - 2020
- Análisis tridimensional del nado libre del espermatozoide y su regulación, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2010 - 2013
- Desarrollo de un prototipo para la evaluacion precisa de la calidad del mango bajo condiciones de laboratorio de campo, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2009
- Sistemas de análisis del movimiento tridimensional del espermatozoide, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2009 - 2011
- Seguimiento tridimensional tracking de trayectoria de microorganismos al nado libre, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2007 - 2008
- Determinación de la posición tridimensional de estructuras complejas en procesos simulados de fermentación multifásica a partir de imágenes estereoscópicas., DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2005 - 2006
Nivel C del PRIDE
Nivel II del SNII
Nivel II del SNII
Doctorado, en Ciencias, Universidad de París XII (1989)
Licenciatura, Ingeniero Electronico y Comunicaciones, Universidad Iberoamericana (1980)
Premio Imaging Solutions of the Year, en el área de Microscopía, Revista Industrial Advanced Imaging, 2008
Mención Honorífica en el área de Investigación Tecnológica en el Premio CANIFARMA, CANIFARMA, 2007
Premio Image-Pro In Action 3er lugar, Media Cybernetics, 2004
Premio Image-Pro In Action, Media Cybernetics, 2002
- Activos
- Graduados
-
Estancia Temporal
1 - Bribiesca Sánchez, Javier Andrés (2020). Análisis Tridimensional de Flujos Internos en una Gota de
Agua Sésil en Evaporación.
Instituto de Investigacion en Ciencias Basicas y Aplicadas,
Maestro en Ciencias,
UAEM.
*
Asesor: Corkidi Blanco, Gabriel Isaac
2 - Pimentel Cabrera, Jaime Arturo (2013). Sistema de rastreo tridimensional de micro-partículas : aplicación en el rastreo de espermatozoides al nado libre .
Doctorado en Ciencia e Ingeniería de la Computación,
UNAM.
*
Asesor: Corkidi Blanco, Gabriel
3 - Vega Alvarado, Leticia (2003). Busqueda automatizada de celulas en division (metafases) por medio de la caracterizacion de su textura.
Instituto de Investigaciones en Matematicas Aplicadas y en Sistemas,
Doctor en Ciencias e Ingenieria de la Computacion,
UNAM.
*
Asesor: Corkidi Blanco, Gabriel
4 - Vargas Soto, Guadalupe (1995). Limite de variacion en la distribucion de las fibras mielinicas y amielinicas del nervio sural normal humano.
Facultad de Ciencias,
Licenciatura en Biologia,
UNAM.
*
Asesor: Teixeira, Fernanda, Corkidi Blanco, Gabriel
5 - Garduno Angeles, Edgar (1995). Sistema automatico para el calculo del indice mitotico por el procesamiento digital de imagenes : MIT 2000 .
Facultad de Ingenieria,
Ingeniero en Computacion,
UNAM.
*
Asesor: Corkidi Blanco, Gabriel
6 - Usisima Blanca, Roberto (1992). Analisis morfometrico computarizado del endotelio corneal humano por procesamiento digital de imagenes.
Facultad de Ingenieria,
Ingeniero en Computacion,
UNAM.
*
Asesor: Corkidi Blanco, Gabriel
Total de publicaciones: 102
- Tipo
- Fecha
Artículo
7 - Bribiesca-Sanchez,A., Guzman,A., Montoya,F., Diaz-Guerrero,D.S., Hernandez,H.O., Hernandez-Herrera,P., Darszon,A., Corkidi,G., Bribiesca,E. (2024). A three-dimensional extension of the slope chain code: analyzing the tortuosity of the flagellar beat of human sperm.
Pattern Analysis and Applications,
27 (3),
74.
Artículo
8 - Hernandez,H.O., Montoya,F., Hernandez-Herrera,P., Diaz-Guerrero,D.S., Olveres,J., Bloomfield-Gadelha,H., Darszon,A., Escalante-Ramirez,B., Corkidi,G. (2024). Feature-Based 3D+t Descriptors of Hyperactivated Human Sperm Beat Patterns.
Heliyon,
10 (5),
e26645.
Artículo
9 - Jablonski,M., Luque,G.M., Gomez-Elias,M., Sanchez-Cardenas,C., Xu,X., de la Vega-Beltran,J.L., Corkidi,G., Linares,A., Abonza,V., Krapf,D., Krapf,D., Darszon,A., Guerrero,A., Buffone,M.G. (2024). Reorganization of the Flagellum Scaffolding Induces a Sperm Standstill Required for Fertilization.
Elife,
13,
RP93792.
Artículo
10 - Corkidi,G., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Bruce,N.C., Bloomfield-Gadelha,H., Darszon,A. (2023). Human sperm rotate with a conserved direction during free swimming in four dimensions .
Journal of Cell Science,
136 (22),
jcs.261306.
Artículo
11 - Hernandez-Herrera,P., Ugartechea-Chirino,Y., Torres-Martinez,H.H., Arzola,A.V., Chairez-Veloz,J.E., Garcia-Ponce,B., de la Paz Sanchez,M., Garay-Arroyo,A., Alvarez-Buylla,E.R., Dubrovsky,J.G., Corkidi,G. (2022). Live Plant Cell Tracking: Fiji plugin to analyze cell proliferation dynamics and understand morphogenesis.
Plant Physiology,
188 (2),
846-860.
Artículo
12 - Corkidi,G., Hernandez-Herrera,P, Montoya,F., Gadelha,H., Darszon,A. (2021). Long-term segmentation-free assessment of head-flagellum movement and intracellular calcium in swimming human sperm.
Journal of Cell Science,
134 (3),
jcs250654.
Revisión
13 - Mata-Martinez,E., Sanchez-Cardenas,C., Chavez,J.C., Guerrero,A., Trevino,C.L., Corkidi,G., Montoya,F., Hernandez-Herrera,P., Buffone,M.G., Balestrini,P.A., Darszon,A. (2021). Role of calcium oscillations in sperm physiology.
Biosystems,
209,
104524 [correction 104546].
Artículo
14 - Bribiesca,A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2020). Device for experimental characterization of the 4D flow inside an evaporating sessile water droplet.
Review of Scientific Instruments,
91 (1),
016101.
Artículo
15 - Gadelha,H., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G. (2020). Human sperm uses asymmetric and anisotropic flagellar controls to regulate swimming symmetry and cell steering.
Science Advances,
6 (31),
eaba5168,
[Retraction vol 7 (21) eaau9116] .
Artículo
16 - Holguin-Salas,A., Corkidi,G., Galindo,E. (2020). Local bubble size distribution in a pilot scale stirred tank containing a mycelial (three phases) dispersion as a function of constant retrofitted gassed power input.
Biochemical Engineering Journal,
159,
107614.
Artículo
17 - Torres-Martinez,H.H., Hernandez-Herrera,P, Corkidi,G, Dubrovsky,J.G (2020). From one cell to many: Morphogenetic field of lateral root founder cells in Arabidopsis thaliana is built by gradual recruitment.
Proceedings of the National Academy of Sciences,
117 (34),
20943-20949.
Artículo
18 - Hernandez-Herrera, P., Montoya, F., Rendon-Mancha, J.M., Darszon, A., Corkidi, G. (2018). 3D+t Human Sperm Flagellum Tracing in low SNR Fluorescence Images.
IEEE Transactions on Medical Imaging,
37 (10),
2236-2247.
Artículo
19 - Sanchez-Cardenas, C., Montoya, F., Navarrete, F.A., Hernandez-Cruz, A., Corkidi, G., Visconti, P.E., Darszon, A. (2018). Intracellular Ca2+ threshold reversibly switches flagellar beat off and on.
Biology of Reproduction,
99 (5),
1010-1021.
Artículo
20 - Brito-Bazan, M., Cuervo-Amaya, D.H., Corkidi, G., Galindo, E. (2017). Air and oil dispersions in a four-phase fermentation model, studied under varying physicochemical conditions and retrofitted constant gassed power input.
Chemical Engineering Research & Design,
120,
316-324.
Artículo
21 - Corkidi, G., Montoya, F., Hernandez-Herrera, P., Rios-Herrera, W.A., Muller, M.F., Trevino, C.L., Darszon, A. (2017). Are there intracellular Ca2+ oscillations correlated with flagellar beating in human sperm? A three vs. two-dimensional analysis.
Molecular Human Reproduction,
23 (9),
583-593.
Artículo
22 - Ponce, G., Corkidi, G., Eapen, D., Lledias, F., Cardenas, L., Cassab, G. (2017). Root hydrotropism and thigmotropism in Arabidopsis thaliana are differentially controlled by redox status.
Plant Signaling and Behavior,
12 (4),
e1305536.
Artículo
23 - Corkidi,G., Montoya,F., Hernandez-Cruz,G., Vargas,M., Luviano-Ortiz,J.L., Ramos,E. (2016). Evaporation dynamics and sedimentation pattern of a sessile particle laden water droplet.
Experiments in Fluids,
57 (6).
Artículo
24 - Pacheco-Escobedo,M.A., Ivanov,V.B., Ransom-Rodriguez,I., Arriaga-Mejia,G., Avila,H., Baklanov,I.A., Pimentel,A., Corkidi,G., Doerner,P., Dubrovsky,J.G., Alvarez-Buylla,E.R., Garay-Arroyo,A. (2016). Longitudinal zonation pattern in Arabidopsis root tip defined by a multiple structural change algorithm.
Annals of Botany,
118 (4),
763-776.
Artículo
25 - Holguin-Salas,A., Lopez-Lopez,D., Corkidi,G., Galindo,E. (2015). Foam production and hydrodynamic performance of a traditional Mexican molinillo (beater) in the chocolate beverage preparation process.
Food and Bioproducts Processing,
93,
139-147.
Artículo
26 - Montiel-Martinez,A., Ciros-Perez,J., Corkidi,G. (2015). Littoral zooplankton-water hyacinth interactions: habitat or refuge?.
Hydrobiologia,
755 (1),
173-182.
Artículo
27 - Rojas-Dominguez,A., Holguin-Salas,A., Galindo,E., Corkidi,G. (2015). Gradient-Direction-Pattern Transform for Automated Measurement of Oil Drops in Images of Multiphase Dispersions.
Chemical Engineering & Technology,
38 (2),
327-335.
Artículo
28 - Wucherpfennig,T., Schulz,A., Pimentel,J.A., Corkidi,G., Sieblitz,D., Pump,M., Gorr,G., Schutte,K., Wittmann,C., Krull,R. (2014). Viability characterization of Taxus chinensis plant cell suspension cultures by rapid colorimetric- and image analysis-based techniques.
Bioprocess and Biosystems Engineering,
37 (9),
1799-1808.
Artículo
29 - Corkidi,G., Rojas,A., Pimentel,A., Galindo,E. (2012). Visualization of compound drops formation in multiphase processes for the identification of factors influencing bubble and water droplet inclusions in oil drops.
Chemical Engineering Research & Design,
90 (11),
1727-1738.
Artículo
30 - Pimentel,J.A., Carneiro,J., Darszon,A., Corkidi,G. (2012). A segmentation algorithm for automated tracking of fast swimming unlabelled cells in three dimensions.
Journal of Microscopy,
245 (1),
72-81.
Revisión
31 - Guerrero,A., Carneiro,J., Pimentel,A., Wood,C.D., Corkidi,G., Darszon,A. (2011). Strategies for locating the female gamete: the importance of measuring sperm trajectories in three spatial dimensions.
Molecular Human Reproduction,
17 (8),
511-523.
Artículo
32 - Corkidi,G., Hernandez-Cruz,G., Ramos,E., Ascanio,G. (2009). Visualization of pseudocaverns in stirred vessels.
Journal of Engineering Science and Technology,
4 (4),
344-350.
Artículo
33 - Uribe,R.M., Zacarias,M., Corkidi,G., Cisneros,M., Charli,J.L., Joseph-Bravo,P. (2009). 17beta-oestradiol indirectly inhibits trh expression in the hypothalamic paraventricular nucleus of female rats and blunts thyroid axis response to cold exposure.
Journal of Neuroendocrinology,
21 (5),
439-448.
Artículo
34 - Cordova-Aguilar,M.S., Diaz-Uribe,R., Escobar,O., Corkidi,G., Galindo,E. (2008). An optical approach for identifying the nature and the relative 3D spatial position of components of complex structures formed in multiphase dispersion systems.
Chemical Engineering Science,
63 (11),
3047-3056.
Artículo
35 - Corkidi,G., Voinson,T., Taboada,B.I., Cordova,M.S., Galindo,E. (2008). Accurate determination of embedded particles within dispersed elements in multiphase dispersions, using a 3D micro-stereoscopic vision system.
Chemical Engineering Science,
63 (2),
317-329.
Artículo
36 - Corkidi,G., Taboada,B., Wood,C.D., Guerrero,A., Darszon,A. (2008). Tracking sperm in three-dimensions.
Biochemical and Biophysical Research Communications,
373 (1),
125-129.
Artículo
37 - Corkidi,G., Serrano-Carreon,L., Galindo,E. (2008). Análisis digital de imágenes para la caracterización microscópica de parámetros críticos en la producción fermentativa de metabolitos secundarios.
Revista Colombiana de Biotecnología,
10 (1),
75-93.
Artículo; Actas Paper
38 - Guevara-Lopez,E., Sanjuan-Galindo,R., Cordova-Aguilar,M.S., Corkidi,G., Ascanio,G., Galindo,E. (2008). High-speed visualization of multiphase dispersions in a mixing tank.
Chemical Engineering Research & Design,
86 (12A),
1382-1387.
Artículo; Actas
39 - Vega-Alvarado,L., Elezgaray,I., Hemar,A., Menard,M., Ranger,C., Corkidi,G. (2007). A comparison of image deconvolution algorithms applied to the detection of endocytic vesicles in fluorescence images of neural proteins.
Conf Proc IEEE Eng Med Biol Soc,
1,
755-758.
*
Artículo
40 - Corkidi,G., Balderas-Ruiz,K.A., Taboada,B., Serrano-Carreon,L., Galindo,E. (2006). Assessing mango anthracnose using a new three-dimensional image-analysis technique to quantify lesions on fruit.
Plant Pathology,
55 (2),
250-257.
Artículo
41 - Taboada,B., Vega-Alvarado,L., Cordova-Aguilar,M., Galindo,E., Corkidi,G. (2006). Semi-automatic image analysis methodology for the segmentation of bubbles and drops in complex dispersions occurring in bioreactors.
Experiments in Fluids,
41 (3),
383-392.
Artículo
42 - Galindo,E., Larralde-Corona,C.P., Brito,T., Cordova-Aguilar,M.S., Taboada,B., Vega-Alvarado,L., Corkidi,G. (2005). Development of advanced image analysis techniques for the in situ characterization of multiphase dispersions occurring in bioreactors.
Journal of Biotechnology,
116 (3),
261-270.
Artículo
43 - Rocha-Valadez,J.A., Hassan,M., Corkidi,G., Flores,C., Galindo,E., Serrano-Carreon,L. (2005). 6-pentyl-alpha-pyrone production by Trichoderma harzianum: The influence of energy dissipation rate and its implications on fungal physiology.
Biotechnology and Bioengineering,
91 (1),
54-61.
Artículo
44 - Galindo,E., Flores,C., Larralde-Corona,P., Corkidi-Blanco,G, Rocha-Valadez,J.A., Serrano-Carreon,L. (2004). Production of 6-pentyl--pyrone by Trichoderma harzianum cultured in unbaffled and baffled shake flasks.
Biochemical Engineering Journal,
18 (1),
1-8.
Artículo
45 - Eapen,D., Barroso,M.L., Campos,M.E., Ponce,G., Corkidi,G., Dubrovsky,J.G., Cassab,G.I. (2003). A no hydrotropic response Root Mutant that Responds Positively to Gravitropism in Arabidopsis.
Plant Physiology,
131 (2),
536-546.
Artículo
46 - Lucatero,S., Larralde-Corona,C.P., Corkidi,G., Galindo,E. (2003). Oil and Air Dispersion in a Simulated Fermentation Broth as a Function of Mycelial Morphology.
Biotechnology Progress,
19 (2),
285-292.
Artículo
47 - Hassan,M., Corkidi,G., Galindo,E., Flores,C., Serrano-Carreon,L. (2002). Accurate and rapid viability assessment of Trichoderma harzianum using fluorescence-based digital image analysis.
Biotechnology and Bioengineering,
80 (6),
677-684.
Artículo
48 - Pena,C., Reyes,C., Larralde-Corona,P., Corkidi,G., Galindo,E. (2002). Characterization of Azotobacter vinelandii aggregation in submerged culture by digital image analysis.
Fems Microbiology Letters,
207 (2),
173-177.
Artículo
49 - Vega-Alvarado,L., Marquez,J., Corkidi,G. (2002). Inter-chromosome texture as a feature for automatic identification of metaphase spreads.
Medical & Biological Engineering & Computing,
40 (4),
479-484.
Artículo
50 - Arambula-Cosio F., Vega,L., Herrera-Becerra A., Prieto-Melendez C., Corkidi,G. (2001). Automatic identification of metaphase spreads and nuclei using neural networks.
Medical & Biological Engineering & Computing,
39 (3),
391-396.
Artículo
51 - Poggio,S., Osorio,A., Corkidi,G., Dreyfus,G., Camarena,L. (2001). The N terminus of FliM is essential to promote flagellar rotation in Rhodobacter sphaeroides.
Journal of Bacteriology,
183 (10),
3142-3148.
Artículo
52 - Sanchez,E., Uribe,R.M., Corkidi,G., Zoeller,R.T., Cisneros,M., Zacarias,M., Morales-Chapa,C., Charli,J.L., Joseph-Bravo,P. (2001). Differential Responses of Thyrotropin-Releasing Hormone (TRH) Neurons to Cold Exposure or Suckling Indicate Functional Heterogeneity of the TRH System in the Paraventricular Nucleus of the Rat Hypothalamus.
Neuroendocrinology,
74 (6),
407-422.
Artículo
53 - Guerrero,C.A., Zarate,S., Corkidi,G., Lopez,S., Arias,C.F. (2000). Biochemical characterization of rotavirus receptors in MA104 cells.
Journal of Virology,
74 (20),
9362-9371.
Artículo
54 - Corkidi,G., Vega,L., Marquez,J., Rojas,E., Ostrosky-Wegman,P. (1998). Roughness feature of metaphase chromosome spreads and nuclei for automated cell proliferation analysis.
Medical & Biological Engineering & Computing,
36 (6),
679-685 [erratum vol 37 p 543].
*
Artículo
55 - Corkidi,G., Diaz-Uribe,R., Folch-Mallol,J.L., Nieto-Sotelo,J. (1998). COVASIAM: an image analysis method that allows detection of confluent microbial colonies and colonies of various sizes for automated counting.
Applied and Environmental Microbiology,
64 (4),
1400-1404.
Artículo
56 - Carbo,R., Zetina,M.E., Corkidi,G., Morales,M.A. (1997). Topographic relationship of neurotensin-containing axon terminals with cardiac and noncardiac principal ganglion cells in the stellate ganglia of the cat.
Synapse,
25 (3),
277-284.
*
Artículo
57 - Corkidi,G., Ruiz-Velasco,S., Ortiz,A., Vargas,G., Teixeira,F. (1997). Limits of variation of fiber distribution in the sural nerve of man.
Archives of Medical Research,
28 (2),
183-187.
*
Artículo
58 - Sanchez,E., Charli,J.L., Morales,C., Corkidi,G., Seidah,N.G., Joseph-Bravo,P., Uribe,R.M. (1997). Expression of the proprotein convertases PC1 and PC2 mRNAs in thyrotropin releasing hormone neurons of the rat paraventricular nucleus of hypothalamus.
Brain Research,
761 (1),
77-86.
Artículo
59 - Talavera,E., Martinez-Lorenzana,G., Corkidi,G., Leon-Olea,M., Condes-Lara,M. (1997). NADPH-diaphorase-stained neurons after experimental epilepsy in rats.
Nitric Oxide - Biology and Chemistry,
1 (6),
484-493.
*
Artículo
60 - Lopez-Velazquez,G., Marquez,J., Ubaldo,E., Corkidi,G., Echeverria,O., Vazquez-Nin,G.H. (1996). Three-dimensional analysis of the arrangement of compact chromatin in the nucleus of G0 rat lymphocytes.
Histochemistry and Cell Biology,
105 (2),
153-161.
*
Artículo
61 - Verdugo-Diaz,L., Mendez,M., Corkidi,G., Drucker-Colin,R. (1995). Phenotypic changes induced by replating of early post-natal rat chromaffin cells.
Neuroscience Letters,
183 (3),
167-170.
Artículo
62 - Corkidi,G., Marquez,J., Garcia-Ruiz,M., Diaz-Cintra,S., Graue,E. (1994). Cartographic system for spatial distribution analysis of corneal endothelial cells.
Medical & Biological Engineering & Computing,
32 (4),
421-426.
*
Artículo
63 - Diaz-Cintra,S., Garcia-Ruiz,M., Corkidi,G., Cintra,L. (1994). Effects of prenatal malnutrition and postnatal nutritional rehabilitation on CA3 hippocampal pyramidal cells in rats of four ages.
Brain Research,
662 (1-2),
117-126.
*
Artículo
64 - Drucker-Colin,R., Verdugo-Diaz,L., Mendez,M., Carrillo-Ruiz,J., Morgado-Valle,C., Hernandez-Cruz,A., Corkidi,G. (1994). Comparison between low frequency magnetic field stimulation and nerve growth factor treatment of cultured chromaffin cells, on neurite growth, noradrenaline release, excitable properties, and grafting in nigrostriatal lesioned rats.
Molecular and Cellular Neuroscience,
5 (6),
485-498.
*
Artículo
65 - Sapiro,R., Corkidi,G., Dominguez,R. (1994). Blockade of the cholinergic system during the female's rat infantile period stimulates follicular growth but not stimulatory feedback of oestrogen.
Medical Science Research,
22 (2),
131-132.
*
Note
66 - Corkidi,G., Marquez,J., Usisima,R., Toledo,R., Valdez,J., Graue,E. (1993). Automated in vivo and online morphometry of human corneal endothelium.
Medical & Biological Engineering & Computing,
31 (4),
432-437 .
*
Artículo
67 - Garcia-Ruiz,M., Diaz-Cintra,S., Cintra,L., Corkidi,G. (1993). Effect of protein malnutrition on CA3 hippocampal pyramidal cells in rats of three ages.
Brain Research,
625 (2),
203-212.
*
Artículo
68 - Flores,R., Ortiz,L., Moreno,M., Corkidi,G., Solar,A., Briseno,M. (1984). OPTO-ELECTRONIC SYSTEM FOR AUTOMATIC TRACK COUNTING IN PLASTIC SSNTD.
Nuclear Tracks And Radiation Measurements,
8 (1-4),
211-214.
*
Artículo
69 - Flores,R., Ortiz,L., Moreno,M., Corkidi,G., Solar,A., Balcazar-Garcia,M. (1983). OPTO-ELECTRONIC SYSTEM FOR AUTOMATIC TRACK COUNTING IN PLASTIC SSNTD.
Nuclear Instruments & Methods In Physics Research,
212 (1-3),
375-381.
*
Memoria in extenso
70 - Diaz-Guerrero,D.S., Montoya,F., Hernandez,H.O., Hernandez-Herrera,P., Darszon,A., Corkidi,G. (2024). Computation of Human-Sperm Local Flagellar Instantaneous Velocity. XLVI Mexican Conference on Biomedical Engineering. IFMBE Proceedings vol 96.
59-66,
Cham: Springer.
Memoria in extenso
71 - Bribiesca-Sanchez,A., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Darszon,A., Corkidi,G. (2023). Artifacts Generated by the 3D Rotation of a Freely-Swimming Human Sperm in the Measurement of Intracellular Ca2+. XLV Mexican Conference on Biomedical Engineering. CNIB 2022. IFMBE Proceedings, vol 86.
355-362,
Cham: Springer International Publishing.
Memoria in extenso
72 - Bribiesca-Sanchez,A., Guzman,A., Darszon,A., Corkidi,G., Bribiesca,E. (2023). A Measure of Tortuosity for 3D Curves: Identifying 3D Beating Patterns ofSperm Flagella. Lecture Notes in Computer Science vol 14062.
363-374.
Memoria in extenso
73 - Bribiesca,J., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2019). Metodología para el análisis 3D de la evaporación y sedimentación de una gota de agua. SOMI XXXIV Congreso de Instrumentación Morelia, Michoacán, México, 16 al 18 de octubre de 2019. .
Memoria in extenso
74 - Bribiesca, J., Montoya, J., Hernandez, P., Ramos-Mora, E., Corkidi, G. (2018). Instrumentación y Algoritmos para el Análisis de la Dinámica Tridimensional de Evaporación de Gotas Sésiles de Agua. SOMI XXXII Congreso de Instrumentación. Acapulco, Gro, Mexico 25 al 27 de octubre 2017.
1-7.
Memoria in extenso
75 - Bribiesca-Sanchez,J.A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2018). Sistema de microscopía tridimensional para muestreo rápido y Time Lapse simultáneamente. SOMI XXXIII Congreso de Instrumentación, Torreón, Coahuila, México, del 29 al 31 de Octubre de 2018.
Mexico: SOMI.
Memoria in extenso
76 - Ehrlich, H., Montoya, F., Hernandez, P., Darszon, A., Corkidi, G. (2017). Análisis de Métricas Sobre el Flagelo de Espermatozoides de Humano en 3D para su Clasificación entre Activados e Hiperactivados. Memorias del XL Congreso Nacional de Ingenieria Biomedica CNIB 2017.
182-185,
Nuevo Leon: Congreso Nacional de Ingeniería Biomédica.
Memoria in extenso
77 - Hernandez-Herrera, P., Montoya, F., Rendon, J. M., Darszon, A., Corkidi, G. (2017). Sperm Flagellum Center-Line Tracing in Fluorescence 3D+t Low SNR Stacks Using an Iterative Minimal Path Method. Image Analysis and Recognition: 14th International Conference, ICIAR 2017, Montreal, QC, Canada, July 5-7, 2017, Proceedings.
Lecture Notes in Computer Science book series ,
437-445,
Cham.
Internacional
78 - Serrano-Carreon,L., Galindo,E., Rocha-Valadez,J.A., Holguin-Salas,A., Corkidi,G. (2015). Hydrodynamics, Fungal Physiology, and Morphology. Filaments in Bioprocesses.
Advances in Biochemical Engineering Biotechnology vol 149,
55-90.
Memoria in extenso
79 - Silva-Villalobos,F., Pimentel,J.A., Darszon,A., Corkidi,G. (2014). Imaging of the 3D dynamics of flagellar beating in human sperm. Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE.
Conf Proc IEEE Eng Med Biol Soc,
190-193,
2014.
Memoria in extenso
80 - Rojas-Dominguez,A., Corkidi,G. (2011). Automated recognition of oil drops in images of multiphase dispersions via gradient direction pattern. Image and Signal Processing (CISP), 2011 4th International Congress on.
1209-1213.
Memoria in extenso
81 - Pimentel,J.A., Corkidi,G. (2010). Three dimensional template matching segmentation method for motile cells in 3D+t video sequences. Proceedings 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology .
4777-4780,
1.
Memoria in extenso
82 - Pimentel,A., Corkidi,G. (2009). Mechanical vibration compensation method for 3D+t multi-particle tracking in microscopic volumes. Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009.
1429-1432,
1.
Memoria in extenso
83 - Rojas-Dominguez,A., Corkidi,G. (2009). Toward automated detection of oil drops in images of multiphase dispersions. Proceeding (654) Signal and Image Processing - 2009. .
Memoria in extenso
84 - Corkidi,G., Taboada,B., Wood,C.D., Guerrero,A., Darszon,A. (2008). Three-dimensional image acquisition system for multi-sperm tracking. Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on.
145-148.
Nacional
85 - Corkidi-Blanco,G. (2008). Viaje al interior de un biorreactor, im genes y an lisis. Una ventana al quehacer científico. Instituto de Biotecnología de la UNAM 25 aniversario, cap 11.
119-130,
Mexico, D.F..
Memoria in extenso
86 - Briere,J.B., Cordova,M.S., Galindo,E., Corkidi,G. (2005). Micro-stereoscopic vision system for the determination of air bubbles and aqueous droplets density within oil drops in simulated processes. Proceedings of the 5th International Conference 3-D Digital Imaging and Modelling.
499-505,
Ottawa.
Internacional
87 - Vega-Alvarado,L., Cordova,M.S., Taboada,B., Galindo,E., Corkidi,G. (2004). Online Sauter Diameter Measurement of Air Bubbles and Oil Drops in Stirred Bioreactors by Using Hough Transform. Lecture Notes in Computer Science.
834-840,
3212.
Internacional
88 - Corkidi-Blanco,G., Trejo,M., Nieto-Sotelo,J. (2003). Automated microbial colony counting using image processing techniques. Rapid analytical microbiology: the chemistry and physics of microbial indentification.
263-282.
Memoria in extenso
89 - Taboada,B., Poggio,S., Camarena,L., Corkidi,G. (2003). Automatic tracking and analysis system for free-swimming bacteria. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings.
906-909,
1.
Memoria in extenso
90 - Vega-Alvarado,L., Taboada,B., Galindo,E., Corkidi,G. (2003). Hough transform based method for air bubbles and oil drops segmentation in dispersions ocurring in stirred bioreactors. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings.
735-738,
1.
Memoria in extenso
91 - Cosio,F.A., Vega,L., Becerra,A.H., Hernandez,R.P., Corkidi,G. (2001). A neural network based workstation for automated cell proliferation analysis. Annual Reports of the Research Reactor Institute, Kyoto University.
2567-2570,
3.
*
Memoria in extenso
92 - Vega-Alvarado,L., Marquez,J., Corkidi,G. (2001). Automatic metaphase finding by inter-chromosome extrema profile analysis. Annual Reports of the Research Reactor Institute, Kyoto University.
2560-2562,
3.
Memoria in extenso
93 - Vega-Alvarado,L., Marquez,J., Corkidi,G. (2001). Inter-extrema profile analysis for a texture coarseness estimate in automatic metaphase finding. ISPA 2001: PROCEEDINGS OF THE 2ND INTERNATIONAL SYMPOSIUM ON IMAGE AND SIGNAL PROCESSING AND ANALYSIS.
159-162.
Preprint
94 - Ren,X.M., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G., Bloomfield-Gadelha,H. (2024). Fluid flow reconstruction around a free-swimming sperm in 3D.
bioRxiv,
Preprint posted June 01, 2024.
Preprint
95 - Bribiesca-Sanchez,A., Montoya,F., Diaz-Guerrero,D.S., Hernandez,H.O., Hernandez-Herrera,P., Darszon,A., Corkidi,G., Bribiesca,E. (2023). A Three-Dimensional Extension of the Slope Chain Code: Analyzing the Tortuosity of the Flagellar Beat of Human Sperm.
Research Square,
Preprint posted 11 Dec.
Preprint
96 - Hernandez,H.O., Montoya,F., Hernandez-Herrera,P., Diaz-Guerrero,D.S., Olveres,J., Darszon,A., Escalante,B., Corkidi,G. (2023). Feature-Based 3D+t Descriptors of Hyperactivated Human Sperm Beat Patterns.
bioRxiv,
Preprint posted April 21.
Preprint
97 - Jablonski,M., Luque,G.M., Gomez-Elias,M., Sanchez-Cardenas,C., Xu,X., de la Vega-Beltran,J.L., Corkidi,G., Linares,A., Abonza,V., Krapf,D., Krapf,D., Darszon,A., Guerrero,A., Buffone,M.G. (2023). Reorganization of the Flagellum Scaffolding Induces a Sperm Standstill Required for Fertilization.
bioRxiv,
Preprint posted Oct 18.
Preprint
98 - Corkidi,G., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Bruce,N.C., Bloomfield-Gadelha,H., Darszon,A. (2022). The human sperm head spins with a conserved direction during swimming in 3D.
bioRxiv,
Preprint posted November 29,
2022.
memoria in extenso
99 - Hernandez,H.O., Hernandez-Herrera,P., Montoya,F., Olveres,J., Bloomfield-Gadelha,H., Darszon,A., Escalante-Ramirez,B., Corkidi,G. (2022). 3D+t feature-based descriptor for unsupervised flagellar human sperm beat classification.
Annual International Conference of the IEEE Engineering in Medicine and Biology Society,
2022,
488-492.
Memoria in extenso
100 - Bribiesca,A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2021). Análisis de la dinámica tridimensional de evaporación de gotas sésiles de interés biomédico.
Memorias Del Congreso Nacional De Ingeniería Biomédica,
8 (1),
69-72.
Preprint
101 - Corkidi,G., Hernandez-Herrera,P., Montoya,F., Gadelha,H., Darszon,A. (2020). Computer-assisted segmentation-free analysis for long-term assessment of flagellar beating in free swimming human spermatozoa: the role of emptying calcium stores.
bioRxiv,
Preprint posted July 15,
2020.
Divulgación
102 - Corkidi-Blanco,G, Darszon-Israel,A. (2019). El flagelo del espermatozoide humano en tres dimensiones.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
16,
3-5.
Preprint
103 - Gadelha,H., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G. (2019). The human sperm beats anisotropically and asymmetrically in 3D.
bioRxiv,
Preprint posted October 05, 2019,
795245.
Divulgación
104 - Holguin-Salas,A., Corkidi-Blanco,G, Galindo-Fentanes,E. (2017). La ciencia detrás de la receta de la abuela para preparar chocolate espumoso usando un molinillo.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
10,
3-5.
Divulgación
105 - Galindo,E., Corkidi,G., Holguin-Salas,A., Lopez-Lopez,D. (2014). Producción de espuma en el chocolate con el molinillo tradicional.
Revista Digital Universitaria,
15 (5),
art 37.
Divulgación
106 - Corkidi-Blanco,G, Rojas-Dominguez,A., Balderas-Ruiz,K.A., Sangabriel-Mendoza,J.C., Serrano-Carreon,L., Galindo-Fentanes,E. (2010). Una nueva herramienta para la caracterización precisa y cuantitativa de la Antracnosis del Mango, de utilidad para fitopatólogos, productores y exportadores.
Claridades Agropecuarias,
198,
39-47.
Nacional
107 - Taboada,B., Larralde,P., Brito,T., Vega-Alvarado,L., Diaz,R., Galindo,E., Corkidi,G. (2003). Images acquisition of multiphase dispersion in fermentation processes.
Journal of Applied Research and Technology,
1 (1),
78-84.
Nacional
108 - Granados,L., Cintra,L., Aguilar,A., Corkidi,G., Kemper,T., Morgane,P., Diaz-Cintra,S. (1995). Mossy fibers of the hippocampal formation in prenatal malnourished rats.
Boletin de estudios medicos y biologicos,
43 (1-4),
3-11.
*
Artículo
109 - Bribiesca-Sanchez,A., Guzman,A., Montoya,F., Diaz-Guerrero,D.S., Hernandez,H.O., Hernandez-Herrera,P., Darszon,A., Corkidi,G., Bribiesca,E.. A three-dimensional extension of the slope chain code: analyzing the tortuosity of the flagellar beat of human sperm.
Pattern Analysis and Applications,
27 (3),
74.
Artículo
110 - Hernandez,H.O., Montoya,F., Hernandez-Herrera,P., Diaz-Guerrero,D.S., Olveres,J., Bloomfield-Gadelha,H., Darszon,A., Escalante-Ramirez,B., Corkidi,G.. Feature-Based 3D+t Descriptors of Hyperactivated Human Sperm Beat Patterns.
Heliyon,
10 (5),
e26645.
Artículo
111 - Jablonski,M., Luque,G.M., Gomez-Elias,M., Sanchez-Cardenas,C., Xu,X., de la Vega-Beltran,J.L., Corkidi,G., Linares,A., Abonza,V., Krapf,D., Krapf,D., Darszon,A., Guerrero,A., Buffone,M.G.. Reorganization of the Flagellum Scaffolding Induces a Sperm Standstill Required for Fertilization.
Elife,
13,
RP93792.
Memoria in extenso
112 - Diaz-Guerrero,D.S., Montoya,F., Hernandez,H.O., Hernandez-Herrera,P., Darszon,A., Corkidi,G.. Computation of Human-Sperm Local Flagellar Instantaneous Velocity. XLVI Mexican Conference on Biomedical Engineering. IFMBE Proceedings vol 96.
59-66,
Cham: Springer.
Preprint
113 - Ren,X.M., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G., Bloomfield-Gadelha,H.. Fluid flow reconstruction around a free-swimming sperm in 3D.
bioRxiv,
Preprint posted June 01, 2024.
Artículo
114 - Corkidi,G., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Bruce,N.C., Bloomfield-Gadelha,H., Darszon,A.. Human sperm rotate with a conserved direction during free swimming in four dimensions .
Journal of Cell Science,
136 (22),
jcs.261306.
Memoria in extenso
115 - Bribiesca-Sanchez,A., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Darszon,A., Corkidi,G.. Artifacts Generated by the 3D Rotation of a Freely-Swimming Human Sperm in the Measurement of Intracellular Ca2+. XLV Mexican Conference on Biomedical Engineering. CNIB 2022. IFMBE Proceedings, vol 86.
355-362,
Cham: Springer International Publishing.
Memoria in extenso
116 - Bribiesca-Sanchez,A., Guzman,A., Darszon,A., Corkidi,G., Bribiesca,E.. A Measure of Tortuosity for 3D Curves: Identifying 3D Beating Patterns ofSperm Flagella. Lecture Notes in Computer Science vol 14062.
363-374.
Preprint
117 - Bribiesca-Sanchez,A., Montoya,F., Diaz-Guerrero,D.S., Hernandez,H.O., Hernandez-Herrera,P., Darszon,A., Corkidi,G., Bribiesca,E.. A Three-Dimensional Extension of the Slope Chain Code: Analyzing the Tortuosity of the Flagellar Beat of Human Sperm.
Research Square,
Preprint posted 11 Dec.
Preprint
118 - Hernandez,H.O., Montoya,F., Hernandez-Herrera,P., Diaz-Guerrero,D.S., Olveres,J., Darszon,A., Escalante,B., Corkidi,G.. Feature-Based 3D+t Descriptors of Hyperactivated Human Sperm Beat Patterns.
bioRxiv,
Preprint posted April 21.
Preprint
119 - Jablonski,M., Luque,G.M., Gomez-Elias,M., Sanchez-Cardenas,C., Xu,X., de la Vega-Beltran,J.L., Corkidi,G., Linares,A., Abonza,V., Krapf,D., Krapf,D., Darszon,A., Guerrero,A., Buffone,M.G.. Reorganization of the Flagellum Scaffolding Induces a Sperm Standstill Required for Fertilization.
bioRxiv,
Preprint posted Oct 18.
Artículo
120 - Hernandez-Herrera,P., Ugartechea-Chirino,Y., Torres-Martinez,H.H., Arzola,A.V., Chairez-Veloz,J.E., Garcia-Ponce,B., de la Paz Sanchez,M., Garay-Arroyo,A., Alvarez-Buylla,E.R., Dubrovsky,J.G., Corkidi,G.. Live Plant Cell Tracking: Fiji plugin to analyze cell proliferation dynamics and understand morphogenesis.
Plant Physiology,
188 (2),
846-860.
Preprint
121 - Corkidi,G., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Bruce,N.C., Bloomfield-Gadelha,H., Darszon,A.. The human sperm head spins with a conserved direction during swimming in 3D.
bioRxiv,
Preprint posted November 29,
2022.
memoria in extenso
122 - Hernandez,H.O., Hernandez-Herrera,P., Montoya,F., Olveres,J., Bloomfield-Gadelha,H., Darszon,A., Escalante-Ramirez,B., Corkidi,G.. 3D+t feature-based descriptor for unsupervised flagellar human sperm beat classification.
Annual International Conference of the IEEE Engineering in Medicine and Biology Society,
2022,
488-492.
Artículo
123 - Corkidi,G., Hernandez-Herrera,P, Montoya,F., Gadelha,H., Darszon,A.. Long-term segmentation-free assessment of head-flagellum movement and intracellular calcium in swimming human sperm.
Journal of Cell Science,
134 (3),
jcs250654.
Revisión
124 - Mata-Martinez,E., Sanchez-Cardenas,C., Chavez,J.C., Guerrero,A., Trevino,C.L., Corkidi,G., Montoya,F., Hernandez-Herrera,P., Buffone,M.G., Balestrini,P.A., Darszon,A.. Role of calcium oscillations in sperm physiology.
Biosystems,
209,
104524 [correction 104546].
Memoria in extenso
125 - Bribiesca,A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Análisis de la dinámica tridimensional de evaporación de gotas sésiles de interés biomédico.
Memorias Del Congreso Nacional De Ingeniería Biomédica,
8 (1),
69-72.
Artículo
126 - Bribiesca,A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Device for experimental characterization of the 4D flow inside an evaporating sessile water droplet.
Review of Scientific Instruments,
91 (1),
016101.
Artículo
127 - Gadelha,H., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G.. Human sperm uses asymmetric and anisotropic flagellar controls to regulate swimming symmetry and cell steering.
Science Advances,
6 (31),
eaba5168,
[Retraction vol 7 (21) eaau9116] .
Artículo
128 - Holguin-Salas,A., Corkidi,G., Galindo,E.. Local bubble size distribution in a pilot scale stirred tank containing a mycelial (three phases) dispersion as a function of constant retrofitted gassed power input.
Biochemical Engineering Journal,
159,
107614.
Artículo
129 - Torres-Martinez,H.H., Hernandez-Herrera,P, Corkidi,G, Dubrovsky,J.G. From one cell to many: Morphogenetic field of lateral root founder cells in Arabidopsis thaliana is built by gradual recruitment.
Proceedings of the National Academy of Sciences,
117 (34),
20943-20949.
Preprint
130 - Corkidi,G., Hernandez-Herrera,P., Montoya,F., Gadelha,H., Darszon,A.. Computer-assisted segmentation-free analysis for long-term assessment of flagellar beating in free swimming human spermatozoa: the role of emptying calcium stores.
bioRxiv,
Preprint posted July 15,
2020.
Memoria in extenso
131 - Bribiesca,J., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Metodología para el análisis 3D de la evaporación y sedimentación de una gota de agua. SOMI XXXIV Congreso de Instrumentación Morelia, Michoacán, México, 16 al 18 de octubre de 2019. .
Divulgación
132 - Corkidi-Blanco,G, Darszon-Israel,A.. El flagelo del espermatozoide humano en tres dimensiones.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
16,
3-5.
Preprint
133 - Gadelha,H., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G.. The human sperm beats anisotropically and asymmetrically in 3D.
bioRxiv,
Preprint posted October 05, 2019,
795245.
Artículo
134 - Hernandez-Herrera, P., Montoya, F., Rendon-Mancha, J.M., Darszon, A., Corkidi, G.. 3D+t Human Sperm Flagellum Tracing in low SNR Fluorescence Images.
IEEE Transactions on Medical Imaging,
37 (10),
2236-2247.
Artículo
135 - Sanchez-Cardenas, C., Montoya, F., Navarrete, F.A., Hernandez-Cruz, A., Corkidi, G., Visconti, P.E., Darszon, A.. Intracellular Ca2+ threshold reversibly switches flagellar beat off and on.
Biology of Reproduction,
99 (5),
1010-1021.
Memoria in extenso
136 - Bribiesca, J., Montoya, J., Hernandez, P., Ramos-Mora, E., Corkidi, G.. Instrumentación y Algoritmos para el Análisis de la Dinámica Tridimensional de Evaporación de Gotas Sésiles de Agua. SOMI XXXII Congreso de Instrumentación. Acapulco, Gro, Mexico 25 al 27 de octubre 2017.
1-7.
Memoria in extenso
137 - Bribiesca-Sanchez,J.A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Sistema de microscopía tridimensional para muestreo rápido y Time Lapse simultáneamente. SOMI XXXIII Congreso de Instrumentación, Torreón, Coahuila, México, del 29 al 31 de Octubre de 2018.
Mexico: SOMI.
Artículo
138 - Brito-Bazan, M., Cuervo-Amaya, D.H., Corkidi, G., Galindo, E.. Air and oil dispersions in a four-phase fermentation model, studied under varying physicochemical conditions and retrofitted constant gassed power input.
Chemical Engineering Research & Design,
120,
316-324.
Artículo
139 - Corkidi, G., Montoya, F., Hernandez-Herrera, P., Rios-Herrera, W.A., Muller, M.F., Trevino, C.L., Darszon, A.. Are there intracellular Ca2+ oscillations correlated with flagellar beating in human sperm? A three vs. two-dimensional analysis.
Molecular Human Reproduction,
23 (9),
583-593.
Artículo
140 - Ponce, G., Corkidi, G., Eapen, D., Lledias, F., Cardenas, L., Cassab, G.. Root hydrotropism and thigmotropism in Arabidopsis thaliana are differentially controlled by redox status.
Plant Signaling and Behavior,
12 (4),
e1305536.
Memoria in extenso
141 - Ehrlich, H., Montoya, F., Hernandez, P., Darszon, A., Corkidi, G.. Análisis de Métricas Sobre el Flagelo de Espermatozoides de Humano en 3D para su Clasificación entre Activados e Hiperactivados. Memorias del XL Congreso Nacional de Ingenieria Biomedica CNIB 2017.
182-185,
Nuevo Leon: Congreso Nacional de Ingeniería Biomédica.
Memoria in extenso
142 - Hernandez-Herrera, P., Montoya, F., Rendon, J. M., Darszon, A., Corkidi, G.. Sperm Flagellum Center-Line Tracing in Fluorescence 3D+t Low SNR Stacks Using an Iterative Minimal Path Method. Image Analysis and Recognition: 14th International Conference, ICIAR 2017, Montreal, QC, Canada, July 5-7, 2017, Proceedings.
Lecture Notes in Computer Science book series ,
437-445,
Cham.
Divulgación
143 - Holguin-Salas,A., Corkidi-Blanco,G, Galindo-Fentanes,E.. La ciencia detrás de la receta de la abuela para preparar chocolate espumoso usando un molinillo.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
10,
3-5.
Artículo
144 - Corkidi,G., Montoya,F., Hernandez-Cruz,G., Vargas,M., Luviano-Ortiz,J.L., Ramos,E.. Evaporation dynamics and sedimentation pattern of a sessile particle laden water droplet.
Experiments in Fluids,
57 (6).
Artículo
145 - Pacheco-Escobedo,M.A., Ivanov,V.B., Ransom-Rodriguez,I., Arriaga-Mejia,G., Avila,H., Baklanov,I.A., Pimentel,A., Corkidi,G., Doerner,P., Dubrovsky,J.G., Alvarez-Buylla,E.R., Garay-Arroyo,A.. Longitudinal zonation pattern in Arabidopsis root tip defined by a multiple structural change algorithm.
Annals of Botany,
118 (4),
763-776.
Artículo
146 - Holguin-Salas,A., Lopez-Lopez,D., Corkidi,G., Galindo,E.. Foam production and hydrodynamic performance of a traditional Mexican molinillo (beater) in the chocolate beverage preparation process.
Food and Bioproducts Processing,
93,
139-147.
Artículo
147 - Montiel-Martinez,A., Ciros-Perez,J., Corkidi,G.. Littoral zooplankton-water hyacinth interactions: habitat or refuge?.
Hydrobiologia,
755 (1),
173-182.
Artículo
148 - Rojas-Dominguez,A., Holguin-Salas,A., Galindo,E., Corkidi,G.. Gradient-Direction-Pattern Transform for Automated Measurement of Oil Drops in Images of Multiphase Dispersions.
Chemical Engineering & Technology,
38 (2),
327-335.
Internacional
149 - Serrano-Carreon,L., Galindo,E., Rocha-Valadez,J.A., Holguin-Salas,A., Corkidi,G.. Hydrodynamics, Fungal Physiology, and Morphology. Filaments in Bioprocesses.
Advances in Biochemical Engineering Biotechnology vol 149,
55-90.
Artículo
150 - Wucherpfennig,T., Schulz,A., Pimentel,J.A., Corkidi,G., Sieblitz,D., Pump,M., Gorr,G., Schutte,K., Wittmann,C., Krull,R.. Viability characterization of Taxus chinensis plant cell suspension cultures by rapid colorimetric- and image analysis-based techniques.
Bioprocess and Biosystems Engineering,
37 (9),
1799-1808.
Memoria in extenso
151 - Silva-Villalobos,F., Pimentel,J.A., Darszon,A., Corkidi,G.. Imaging of the 3D dynamics of flagellar beating in human sperm. Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE.
Conf Proc IEEE Eng Med Biol Soc,
190-193,
2014.
Divulgación
152 - Galindo,E., Corkidi,G., Holguin-Salas,A., Lopez-Lopez,D.. Producción de espuma en el chocolate con el molinillo tradicional.
Revista Digital Universitaria,
15 (5),
art 37.
Artículo
153 - Corkidi,G., Rojas,A., Pimentel,A., Galindo,E.. Visualization of compound drops formation in multiphase processes for the identification of factors influencing bubble and water droplet inclusions in oil drops.
Chemical Engineering Research & Design,
90 (11),
1727-1738.
Artículo
154 - Pimentel,J.A., Carneiro,J., Darszon,A., Corkidi,G.. A segmentation algorithm for automated tracking of fast swimming unlabelled cells in three dimensions.
Journal of Microscopy,
245 (1),
72-81.
Revisión
155 - Guerrero,A., Carneiro,J., Pimentel,A., Wood,C.D., Corkidi,G., Darszon,A.. Strategies for locating the female gamete: the importance of measuring sperm trajectories in three spatial dimensions.
Molecular Human Reproduction,
17 (8),
511-523.
Memoria in extenso
156 - Rojas-Dominguez,A., Corkidi,G.. Automated recognition of oil drops in images of multiphase dispersions via gradient direction pattern. Image and Signal Processing (CISP), 2011 4th International Congress on.
1209-1213.
Memoria in extenso
157 - Pimentel,J.A., Corkidi,G.. Three dimensional template matching segmentation method for motile cells in 3D+t video sequences. Proceedings 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology .
4777-4780,
1.
Divulgación
158 - Corkidi-Blanco,G, Rojas-Dominguez,A., Balderas-Ruiz,K.A., Sangabriel-Mendoza,J.C., Serrano-Carreon,L., Galindo-Fentanes,E.. Una nueva herramienta para la caracterización precisa y cuantitativa de la Antracnosis del Mango, de utilidad para fitopatólogos, productores y exportadores.
Claridades Agropecuarias,
198,
39-47.
Artículo
159 - Corkidi,G., Hernandez-Cruz,G., Ramos,E., Ascanio,G.. Visualization of pseudocaverns in stirred vessels.
Journal of Engineering Science and Technology,
4 (4),
344-350.
Artículo
160 - Uribe,R.M., Zacarias,M., Corkidi,G., Cisneros,M., Charli,J.L., Joseph-Bravo,P.. 17beta-oestradiol indirectly inhibits trh expression in the hypothalamic paraventricular nucleus of female rats and blunts thyroid axis response to cold exposure.
Journal of Neuroendocrinology,
21 (5),
439-448.
Memoria in extenso
161 - Pimentel,A., Corkidi,G.. Mechanical vibration compensation method for 3D+t multi-particle tracking in microscopic volumes. Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009.
1429-1432,
1.
Memoria in extenso
162 - Rojas-Dominguez,A., Corkidi,G.. Toward automated detection of oil drops in images of multiphase dispersions. Proceeding (654) Signal and Image Processing - 2009. .
Artículo
163 - Cordova-Aguilar,M.S., Diaz-Uribe,R., Escobar,O., Corkidi,G., Galindo,E.. An optical approach for identifying the nature and the relative 3D spatial position of components of complex structures formed in multiphase dispersion systems.
Chemical Engineering Science,
63 (11),
3047-3056.
Artículo
164 - Corkidi,G., Voinson,T., Taboada,B.I., Cordova,M.S., Galindo,E.. Accurate determination of embedded particles within dispersed elements in multiphase dispersions, using a 3D micro-stereoscopic vision system.
Chemical Engineering Science,
63 (2),
317-329.
Artículo
165 - Corkidi,G., Taboada,B., Wood,C.D., Guerrero,A., Darszon,A.. Tracking sperm in three-dimensions.
Biochemical and Biophysical Research Communications,
373 (1),
125-129.
Artículo
166 - Corkidi,G., Serrano-Carreon,L., Galindo,E.. Análisis digital de imágenes para la caracterización microscópica de parámetros críticos en la producción fermentativa de metabolitos secundarios.
Revista Colombiana de Biotecnología,
10 (1),
75-93.
Artículo; Actas Paper
167 - Guevara-Lopez,E., Sanjuan-Galindo,R., Cordova-Aguilar,M.S., Corkidi,G., Ascanio,G., Galindo,E.. High-speed visualization of multiphase dispersions in a mixing tank.
Chemical Engineering Research & Design,
86 (12A),
1382-1387.
Memoria in extenso
168 - Corkidi,G., Taboada,B., Wood,C.D., Guerrero,A., Darszon,A.. Three-dimensional image acquisition system for multi-sperm tracking. Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on.
145-148.
Nacional
169 - Corkidi-Blanco,G.. Viaje al interior de un biorreactor, im genes y an lisis. Una ventana al quehacer científico. Instituto de Biotecnología de la UNAM 25 aniversario, cap 11.
119-130,
Mexico, D.F..
Artículo; Actas
170 - Vega-Alvarado,L., Elezgaray,I., Hemar,A., Menard,M., Ranger,C., Corkidi,G.. A comparison of image deconvolution algorithms applied to the detection of endocytic vesicles in fluorescence images of neural proteins.
Conf Proc IEEE Eng Med Biol Soc,
1,
755-758.
*
Artículo
171 - Corkidi,G., Balderas-Ruiz,K.A., Taboada,B., Serrano-Carreon,L., Galindo,E.. Assessing mango anthracnose using a new three-dimensional image-analysis technique to quantify lesions on fruit.
Plant Pathology,
55 (2),
250-257.
Artículo
172 - Taboada,B., Vega-Alvarado,L., Cordova-Aguilar,M., Galindo,E., Corkidi,G.. Semi-automatic image analysis methodology for the segmentation of bubbles and drops in complex dispersions occurring in bioreactors.
Experiments in Fluids,
41 (3),
383-392.
Artículo
173 - Galindo,E., Larralde-Corona,C.P., Brito,T., Cordova-Aguilar,M.S., Taboada,B., Vega-Alvarado,L., Corkidi,G.. Development of advanced image analysis techniques for the in situ characterization of multiphase dispersions occurring in bioreactors.
Journal of Biotechnology,
116 (3),
261-270.
Artículo
174 - Rocha-Valadez,J.A., Hassan,M., Corkidi,G., Flores,C., Galindo,E., Serrano-Carreon,L.. 6-pentyl-alpha-pyrone production by Trichoderma harzianum: The influence of energy dissipation rate and its implications on fungal physiology.
Biotechnology and Bioengineering,
91 (1),
54-61.
Memoria in extenso
175 - Briere,J.B., Cordova,M.S., Galindo,E., Corkidi,G.. Micro-stereoscopic vision system for the determination of air bubbles and aqueous droplets density within oil drops in simulated processes. Proceedings of the 5th International Conference 3-D Digital Imaging and Modelling.
499-505,
Ottawa.
Artículo
176 - Galindo,E., Flores,C., Larralde-Corona,P., Corkidi-Blanco,G, Rocha-Valadez,J.A., Serrano-Carreon,L.. Production of 6-pentyl--pyrone by Trichoderma harzianum cultured in unbaffled and baffled shake flasks.
Biochemical Engineering Journal,
18 (1),
1-8.
Internacional
177 - Vega-Alvarado,L., Cordova,M.S., Taboada,B., Galindo,E., Corkidi,G.. Online Sauter Diameter Measurement of Air Bubbles and Oil Drops in Stirred Bioreactors by Using Hough Transform. Lecture Notes in Computer Science.
834-840,
3212.
Artículo
178 - Eapen,D., Barroso,M.L., Campos,M.E., Ponce,G., Corkidi,G., Dubrovsky,J.G., Cassab,G.I.. A no hydrotropic response Root Mutant that Responds Positively to Gravitropism in Arabidopsis.
Plant Physiology,
131 (2),
536-546.
Artículo
179 - Lucatero,S., Larralde-Corona,C.P., Corkidi,G., Galindo,E.. Oil and Air Dispersion in a Simulated Fermentation Broth as a Function of Mycelial Morphology.
Biotechnology Progress,
19 (2),
285-292.
Internacional
180 - Corkidi-Blanco,G., Trejo,M., Nieto-Sotelo,J.. Automated microbial colony counting using image processing techniques. Rapid analytical microbiology: the chemistry and physics of microbial indentification.
263-282.
Memoria in extenso
181 - Taboada,B., Poggio,S., Camarena,L., Corkidi,G.. Automatic tracking and analysis system for free-swimming bacteria. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings.
906-909,
1.
Memoria in extenso
182 - Vega-Alvarado,L., Taboada,B., Galindo,E., Corkidi,G.. Hough transform based method for air bubbles and oil drops segmentation in dispersions ocurring in stirred bioreactors. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings.
735-738,
1.
Nacional
183 - Taboada,B., Larralde,P., Brito,T., Vega-Alvarado,L., Diaz,R., Galindo,E., Corkidi,G.. Images acquisition of multiphase dispersion in fermentation processes.
Journal of Applied Research and Technology,
1 (1),
78-84.
Artículo
184 - Hassan,M., Corkidi,G., Galindo,E., Flores,C., Serrano-Carreon,L.. Accurate and rapid viability assessment of Trichoderma harzianum using fluorescence-based digital image analysis.
Biotechnology and Bioengineering,
80 (6),
677-684.
Artículo
185 - Pena,C., Reyes,C., Larralde-Corona,P., Corkidi,G., Galindo,E.. Characterization of Azotobacter vinelandii aggregation in submerged culture by digital image analysis.
Fems Microbiology Letters,
207 (2),
173-177.
Artículo
186 - Vega-Alvarado,L., Marquez,J., Corkidi,G.. Inter-chromosome texture as a feature for automatic identification of metaphase spreads.
Medical & Biological Engineering & Computing,
40 (4),
479-484.
Artículo
187 - Arambula-Cosio F., Vega,L., Herrera-Becerra A., Prieto-Melendez C., Corkidi,G.. Automatic identification of metaphase spreads and nuclei using neural networks.
Medical & Biological Engineering & Computing,
39 (3),
391-396.
Artículo
188 - Poggio,S., Osorio,A., Corkidi,G., Dreyfus,G., Camarena,L.. The N terminus of FliM is essential to promote flagellar rotation in Rhodobacter sphaeroides.
Journal of Bacteriology,
183 (10),
3142-3148.
Artículo
189 - Sanchez,E., Uribe,R.M., Corkidi,G., Zoeller,R.T., Cisneros,M., Zacarias,M., Morales-Chapa,C., Charli,J.L., Joseph-Bravo,P.. Differential Responses of Thyrotropin-Releasing Hormone (TRH) Neurons to Cold Exposure or Suckling Indicate Functional Heterogeneity of the TRH System in the Paraventricular Nucleus of the Rat Hypothalamus.
Neuroendocrinology,
74 (6),
407-422.
Memoria in extenso
190 - Cosio,F.A., Vega,L., Becerra,A.H., Hernandez,R.P., Corkidi,G.. A neural network based workstation for automated cell proliferation analysis. Annual Reports of the Research Reactor Institute, Kyoto University.
2567-2570,
3.
*
Memoria in extenso
191 - Vega-Alvarado,L., Marquez,J., Corkidi,G.. Automatic metaphase finding by inter-chromosome extrema profile analysis. Annual Reports of the Research Reactor Institute, Kyoto University.
2560-2562,
3.
Memoria in extenso
192 - Vega-Alvarado,L., Marquez,J., Corkidi,G.. Inter-extrema profile analysis for a texture coarseness estimate in automatic metaphase finding. ISPA 2001: PROCEEDINGS OF THE 2ND INTERNATIONAL SYMPOSIUM ON IMAGE AND SIGNAL PROCESSING AND ANALYSIS.
159-162.
Artículo
193 - Guerrero,C.A., Zarate,S., Corkidi,G., Lopez,S., Arias,C.F.. Biochemical characterization of rotavirus receptors in MA104 cells.
Journal of Virology,
74 (20),
9362-9371.
Artículo
194 - Corkidi,G., Vega,L., Marquez,J., Rojas,E., Ostrosky-Wegman,P.. Roughness feature of metaphase chromosome spreads and nuclei for automated cell proliferation analysis.
Medical & Biological Engineering & Computing,
36 (6),
679-685 [erratum vol 37 p 543].
*
Artículo
195 - Corkidi,G., Diaz-Uribe,R., Folch-Mallol,J.L., Nieto-Sotelo,J.. COVASIAM: an image analysis method that allows detection of confluent microbial colonies and colonies of various sizes for automated counting.
Applied and Environmental Microbiology,
64 (4),
1400-1404.
Artículo
196 - Carbo,R., Zetina,M.E., Corkidi,G., Morales,M.A.. Topographic relationship of neurotensin-containing axon terminals with cardiac and noncardiac principal ganglion cells in the stellate ganglia of the cat.
Synapse,
25 (3),
277-284.
*
Artículo
197 - Corkidi,G., Ruiz-Velasco,S., Ortiz,A., Vargas,G., Teixeira,F.. Limits of variation of fiber distribution in the sural nerve of man.
Archives of Medical Research,
28 (2),
183-187.
*
Artículo
198 - Sanchez,E., Charli,J.L., Morales,C., Corkidi,G., Seidah,N.G., Joseph-Bravo,P., Uribe,R.M.. Expression of the proprotein convertases PC1 and PC2 mRNAs in thyrotropin releasing hormone neurons of the rat paraventricular nucleus of hypothalamus.
Brain Research,
761 (1),
77-86.
Artículo
199 - Talavera,E., Martinez-Lorenzana,G., Corkidi,G., Leon-Olea,M., Condes-Lara,M.. NADPH-diaphorase-stained neurons after experimental epilepsy in rats.
Nitric Oxide - Biology and Chemistry,
1 (6),
484-493.
*
Artículo
200 - Lopez-Velazquez,G., Marquez,J., Ubaldo,E., Corkidi,G., Echeverria,O., Vazquez-Nin,G.H.. Three-dimensional analysis of the arrangement of compact chromatin in the nucleus of G0 rat lymphocytes.
Histochemistry and Cell Biology,
105 (2),
153-161.
*
Artículo
201 - Verdugo-Diaz,L., Mendez,M., Corkidi,G., Drucker-Colin,R.. Phenotypic changes induced by replating of early post-natal rat chromaffin cells.
Neuroscience Letters,
183 (3),
167-170.
Nacional
202 - Granados,L., Cintra,L., Aguilar,A., Corkidi,G., Kemper,T., Morgane,P., Diaz-Cintra,S.. Mossy fibers of the hippocampal formation in prenatal malnourished rats.
Boletin de estudios medicos y biologicos,
43 (1-4),
3-11.
*
Artículo
203 - Corkidi,G., Marquez,J., Garcia-Ruiz,M., Diaz-Cintra,S., Graue,E.. Cartographic system for spatial distribution analysis of corneal endothelial cells.
Medical & Biological Engineering & Computing,
32 (4),
421-426.
*
Artículo
204 - Diaz-Cintra,S., Garcia-Ruiz,M., Corkidi,G., Cintra,L.. Effects of prenatal malnutrition and postnatal nutritional rehabilitation on CA3 hippocampal pyramidal cells in rats of four ages.
Brain Research,
662 (1-2),
117-126.
*
Artículo
205 - Drucker-Colin,R., Verdugo-Diaz,L., Mendez,M., Carrillo-Ruiz,J., Morgado-Valle,C., Hernandez-Cruz,A., Corkidi,G.. Comparison between low frequency magnetic field stimulation and nerve growth factor treatment of cultured chromaffin cells, on neurite growth, noradrenaline release, excitable properties, and grafting in nigrostriatal lesioned rats.
Molecular and Cellular Neuroscience,
5 (6),
485-498.
*
Artículo
206 - Sapiro,R., Corkidi,G., Dominguez,R.. Blockade of the cholinergic system during the female's rat infantile period stimulates follicular growth but not stimulatory feedback of oestrogen.
Medical Science Research,
22 (2),
131-132.
*
Note
207 - Corkidi,G., Marquez,J., Usisima,R., Toledo,R., Valdez,J., Graue,E.. Automated in vivo and online morphometry of human corneal endothelium.
Medical & Biological Engineering & Computing,
31 (4),
432-437 .
*
Artículo
208 - Garcia-Ruiz,M., Diaz-Cintra,S., Cintra,L., Corkidi,G.. Effect of protein malnutrition on CA3 hippocampal pyramidal cells in rats of three ages.
Brain Research,
625 (2),
203-212.
*
Artículo
209 - Flores,R., Ortiz,L., Moreno,M., Corkidi,G., Solar,A., Briseno,M.. OPTO-ELECTRONIC SYSTEM FOR AUTOMATIC TRACK COUNTING IN PLASTIC SSNTD.
Nuclear Tracks And Radiation Measurements,
8 (1-4),
211-214.
*
Artículo
210 - Flores,R., Ortiz,L., Moreno,M., Corkidi,G., Solar,A., Balcazar-Garcia,M.. OPTO-ELECTRONIC SYSTEM FOR AUTOMATIC TRACK COUNTING IN PLASTIC SSNTD.
Nuclear Instruments & Methods In Physics Research,
212 (1-3),
375-381.
*
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