Dr. Juan Enrique Morett Sanchez
Investigador
Bioinformática
Número de registros: 9
- Vencidos
- Regulación de la expresión genética a nivel global en bacterias, PRESUPUESTO UNAM, 2014 - 2020
- Estudios de regulación de la expresión genética a nivel global en escherichia coli y geobacter sulfurreducens utilizando estrategias de secuenciación masiva y herramientas bioinformáticas, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2012 - 2016
- Desarrollo de metodologías robustas para el mapeo global de sitios de inicio de la transcripción en escherichia coli y geobacter sulfurreducens mediante secuenciación masiva de extremos 5´trifosfato de los mrna, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2012 - 2014
- Mapeo global de sitios de inicio de transcripción en escherichia coli y otras bacterias por pirosecuenciación, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2009 - 2012
- Evolución de las actividades enzimáticas involucradas en la biosíntesis de biotina, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2008 - 2010
- Estudios estructurales de variantes de hema con actividad de biof obtenidas por evolución dirigida., DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2004 - 2006
- Evolución de nuevas actividades enzimáticas: implementación de sistemas de selección eficientes para demostrar migración catalítica., CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2002 - 2005
- Migración de actividad enzimática por medio de evolución dirigida en un sistema de selección muy sensible, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 1999 - 2002
- Análisis genético de las interacciones moleculares durante la iniciación de la transcripción de bacterias: modificación del factor transcripcional sigma-54, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 1997 - 1998
Nivel D del PRIDE
Nivel III del SNI
Nivel III del SNI
Doctorado, en Bioquímica, Universidad de Sussex, Laboratorio de Fijacion de Nitrogeno
Maestría, en Investigacion Biomedica Basica, UNAM (1986)
Licenciatura, Investigacion Biomedica Basica, UNAM (1984)
- Activos
- Graduados
-
Doctorado
-
Análisis de la distribución de polimorfismos en las regiones microRNA de 95 individuos mexicanos
1 - Aguilar Ordonez, Israel (2015). Diseno de metodologias de enriquecimiento con transcritos primarios para deteccion de sitios de inicio de la transcripcion en escherichia coli k12 : (tecnicas Capture y pHSwitch) .
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
2 - Riveros Mckay Aguilera, Fernando (2014). Uso de tecnologias para analisis bioinformatico de datos de secuenciacion masiva.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
3 - Sanchez Sanchez, Brenda Janice (2012). Estandarizacion de una metodologia para la identificacion de sitios de inicio de la transcripcion dependientes de s70, en escherichia coli k12, mediante mapeo transcripcional in vitro.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
4 - Pedraza Perez, Yagul (2010). Estudios cristalograficos de THIN de Thermotoga maritima, Pirococcus furiosus y Sulfolobus solfataricus, una probable enzima analoga a la tiamina fosfato sintasa de Escherichia coli.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
5 - Contreras Ferrat, Luis Gabriel (2009). Promiscuidad catalitica y adaptabilidad evolutiva : evolucion in vitro y reclutamiento contingente de un intermediario generalista en la ruta de biosintesis de la biotina.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
6 - Dago Rodriguez, Angel Ernesto (2007). Aspectos moleculares del mecanismo de activacion transcripcional de los promotores dependientes de o54 : comunicacion funcional entre el motivo GAFTGA del activador y la Region I de o54 durante el inicio de la transcripcion .
Instituto de Biotecnologia,
Doctorado en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
7 - Torres Sosa, Christian (2006). Ampliacion de la especificidad de la enzima acido 7,8diaminopelargonico sintasa de E. coli, para demostrar la posible existencia de intermediarios no especificos .
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
8 - Juarez Lopez, Katy (2000). Caracterizacion del mecanismo de regulacion por oxigeno de la actividad de NifA de Bradyrhizobium japonicum .
Instituto de Biotecnologia,
Doctorado en Biotecnologia,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
9 - Grande Cano, Ricardo Alfredo (2000). Aspectos moleculares de los mecanismos de expresion de promotores bacterianos sigma54 y sigma70 dependientes .
Instituto de Biotecnologia,
Doctorado en Ciencias (Bioquimica),
UNAM.
Asesor: Morett Sanchez, Juan Enrique
10 - Barrios Camacho, Humberto (1999). Analisis molecular de los sistemas de regulacion transcripcional que controlan la expresion del operon fixRnifA deBradyrhizobium japonicum /.
Instituto de Biotecnologia,
Doctorado en Investigacion Biomedica Basica,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
11 - Gonzalez Zuniga, Victor Manuel (1998). El mecanismo de activacion trascripcional a distancia en bacteria y la region de control positivo de NifA .
Instituto de Biotecnologia,
Doctorado en Biotecnologia,
UNAM.
12 - Davila Ramos, Sonia (1998). Analisis de la interaccion de NifA de R. meliloti con las repiones promotoras UAS (Upstream Activato (Sequences) de los genes nif mediante mutagenesis dirigida .
Instituto de Biotecnologia,
Maestria en Biotecnologia,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
13 - Grande Cano, Ricardo Alfredo (1996). Mutagenesis oligo dirigida de la region promotora-10/ -35 de Operon fix RnifA de Bradyrhizobium japonicum .
Facultad de Ciencias,
Licenciatura en Biología,
UNAM.
*
Asesor: Morett Sanchez, Juan Enrique
14 - Davila Ramos, Sonia (1994). Filogenia y evolucion molecular de las proteinas regulatorias : Two component.
FES Iztacala,
Licenciatura en Biología,
UNAM.
*
Asesor: Morett Sanchez, Juan Enrique
15 - Barrios Camacho, Humberto (1994). Regulacion de la expresion del activador transcripcional NiFA en Bradyrhizobium japonicum .
Facultad de Ciencias,
Licenciatura en Biología,
UNAM.
*
Asesor: Morett Sanchez, Enrique
Total de publicaciones: 74
- Tipo
- Fecha
Revisión
16 - Aguilar-Ordonez,I., Guzman-Linares,J., Ballesteros-Villascan,J., Miron-Toruno,F., Perez-Gonzalez,A., Garcia-Lopez,J., Cruz-Lopez,F., Morett,E. (2022). A Tale of Native American Whole-Genome Sequencing and Other Technologies.
Diversity,
14 (8),
647.
Artículo
17 - Aguilar-Ordonez,I., Perez-Villatoro,F., Garcia-Ortiz,H., Barajas-Olmos,F., Ballesteros-Villascan,J., Gonzalez-Buenfil,R., Fresno,C., Garciarrubio,A., Fernandez-Lopez,J.C., Tovar,H., Hernandez-Lemus,E., Orozco,L., Soberon,X., Morett,E. (2021). Whole genome variation in 27 Mexican indigenous populations, demographic and biomedical insights.
PLoS ONE,
16 (4),
e0249773,
[correction May 25 2022].
Artículo
18 - Andrade,A., Hernandez-Eligio,A., Tirado,A.L., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K. (2021). Specialization of the Reiterated Copies of the Heterodimeric Integration Host Factor Genes in Geobacter sulfurreducens.
Frontiers in Microbiology,
12,
626443.
Artículo
19 - Lara,P., Vega-Alvarado,L., Sahonero-Canavesi,D.X., Koenen,M., Villanueva,L., Riveros-McKay,F., Morett,E., Juarez,K. (2021). Transcriptome Analysis Reveals Cr(VI) Adaptation Mechanisms in Klebsiella sp. Strain AqSCr.
Frontiers in Microbiology,
12,
656589.
Artículo
20 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A. (2021). High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth.
PLoS ONE,
16 (3),
e0248513.
Artículo
21 - Jasso-Chavez,R., Lira-Silva,E., Gonzalez-Sanchez,K., Larios-Serrato,V., Mendoza-Monzoy,D.L., Perez-Villatoro,F., Morett,E., Vega-Segura,A., Torres-Marquez,M.E., Zepeda-Rodriguez,A., Moreno-Sanchez,R. (2019). Marine Archaeon Methanosarcina acetivorans Enhances Polyphosphate Metabolism Under Persistent Cadmium Stress.
Frontiers in Microbiology,
10,
2432.
Artículo; Actas Paper
22 - Hernandez-Eligio, A., Andrade, A., Soto, L., Morett, E., Juarez, K. (2017). The unphosphorylated form of the PilR two-component system regulates pilA gene expression in Geobacter sulfurreducens.
Environmental Science and Pollution Research,
24 (33),
25693-25701.
Artículo; Actas Paper
23 - Lara, P., Morett, E., Juarez, K. (2017). Acetate biostimulation as an effective treatment for cleaning up alkaline soil highly contaminated with Cr(VI).
Environmental Science and Pollution Research,
24 (33),
25513-25521.
Artículo
24 - Romero-Hidalgo, S., Ochoa-Leyva, A., Garciarrubio, A., Acuna-Alonzo, V., Antunez-Arguelles, E., Balcazar-Quintero, M., Barquera-Lozano, R., Carnevale, A., Cornejo-Granados, F., Fernandez-Lopez, J.C., Garcia-Herrera, R., Garcia-Ortiz, H., Granados-Silvestre, A., Granados, J., Guerrero-Romero, F., Hernandez-Lemus, E., Leon-Mimila, P., Macin-Perez, G., Martinez-Hernandez, A., Menjivar, M., Morett, E., Orozco, L., Ortiz-Lopez, G., Perez-Villatoro, F., Rivera-Morales, J., Riveros-McKay, F., Villalobos-Comparan, M., Villamil-Ramirez, H., Villarreal-Molina, T., Canizales-Quinteros, S., Soberon, X. (2017). Demographic history and biologically relevant genetic variation of Native Mexicans inferred from whole-genome sequencing.
Nature Communications,
8 (1),
1005.
Artículo
25 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K. (2016). Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors.
Fems Microbiology Letters,
363 (17),
fnw175.
Artículo
26 - Gallarato,L.A., Sanchez,D.G., Olvera,L., Primo,E.D., Garrido,M.N., Beassoni,P.R., Morett,E., Lisa,A.T. (2014). Exopolyphosphatase of Pseudomonas aeruginosa is essential for the production of virulence factors and its expression is controlled by NtrC and PhoB, acting at two interspaced promoters.
Microbiology,
160 (2),
406-417.
Artículo
27 - Meysman,P., Collado-Vides,J., Morett,E., Viola,R., Engelen,K., Laukens,K. (2014). Structural properties of prokaryotic promoter regions correlate with functional features.
PLoS ONE,
9 (2),
e88717.
Artículo
28 - Balderas-Martinez,Y.I., Savageau,M., Salgado,H., Perez-Rueda,E., Morett,E., Collado-Vides,J. (2013). Transcription Factors in Escherichia coli Prefer the Holo Conformation.
PLoS ONE,
8 (6),
e65723.
Artículo
29 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J. (2013). RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Research,
41 (D1),
D203-D213.
Artículo
30 - Weiss,V., Medina-Rivera,A., Huerta,A.M., Santos-Zavaleta,A., Salgado,H., Morett,E., Collado-Vides,J. (2013). Evidence classification of high-throughput protocols and confidence integration in RegulonDB.
Database (Oxford),
2013,
bas059.
Artículo
31 - Aguilar,C., Escalante,A., FLORES,N., de Anda,R., Riveros-McKay,F., Gosset,G., Morett,E., Bolivar,F. (2012). Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system.
BMC Genomics,
13 (1),
385.
Artículo
32 - Flores,H., Lin,S., Contreras-Ferrat,G., Cronan,J.E., Morett,E. (2012). Evolution of a new function in an esterase: simple amino acid substitutions enable the activity present in the larger paralog, BioH.
Protein Engineering Design & Selection,
25 (8),
387-395.
Artículo
33 - Gallego-Hernandez,A.L., Hernandez-Lucas,I., De la Cruz,M.A., Olvera,L., Morett,E., Medina-Aparicio,L., Ramirez-Trujillo,J.A., Vazquez,A., Fernandez-Mora,M., Calva,E. (2012). Transcriptional regulation of the assT-dsbL-dsbI gene cluster depends on LeuO, H-NS and specific growth conditions in Salmonella enterica serovar Typhi IMSS-1.
Journal of Bacteriology,
194 (9),
2254-2264.
Artículo
34 - Saab-Rincon,G., Olvera,L., Olvera,M., Rudino-Pinera,E., Benites,E., Soberon,X., Morett,E. (2012). Evolutionary Walk between (beta/alpha)(8) Barrels: Catalytic Migration from Triosephosphate Isomerase to Thiamin Phosphate Synthase.
Journal of Molecular Biology,
416 (2),
255-270.
Artículo
35 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J. (2011). RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Research,
39 (Suppl 1),
D98-D105.
Artículo
36 - Massimelli,M.J., Sanchez,D.G., Buchieri,M.V., Olvera,L., Beassoni,P.R., Schweizer,H.P., Morett,E., Lisa,A.T. (2011). Choline catabolism, sigma(54) factor and NtrC are required for the full expression of the Pseudomonas aeruginosa phosphorylcholine phosphatase gene.
Microbiological Research,
166 (5),
380-390.
Revisión
37 - Collado-Vides,J., Salgado,H., Morett,E., Gama-Castro,S., Jimenez-Jacinto,V., Martinez-Flores,I., Medina-Rivera,A., Muniz-Rascado,L., Peralta-Gil,M., Santos-Zavaleta,A. (2009). Bioinformatics resources for the study of gene regulation in bacteria.
Journal of Bacteriology,
191 (1),
23-31.
Artículo
38 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E. (2009). Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli.
PLoS ONE,
4 (10),
e7526.
Artículo
Artículo
40 - Gama-Castro,S., Jimenez-Jacinto,V., Peralta-Gil,M., Santos-Zavaleta,A., Penaloza-Spinola,M.I., Contreras-Moreira,B., Segura-Salazar,J., Muniz-Rascado,L., Martinez-Flores,I., Salgado,H., Bonavides-Martinez,C., Abreu-Goodger,C., Rodriguez-Penagos,C., Miranda-Rios,J., Morett,E., Merino,E., Huerta,A.M., Trevino-Quintanilla,L., Collado-Vides,J. (2008). RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Research,
36 (Database issue),
D120-D124.
Artículo
41 - Morett,E., Saab-Rincon,G., Olvera,L., Olvera,M., Flores,H., Grande,R. (2008). Sensitive Genome-Wide Screen for Low Secondary Enzymatic Activities: The YjbQ Family Shows Thiamin Phosphate Synthase Activity.
Journal of Molecular Biology,
376 (3),
839-853.
Artículo
42 - Watanabe,R.L., Morett,E., Vallejo,E.E. (2008). Inferring modules of functionally interacting proteins using the Bond Energy Algorithm.
BMC Bioinformatics,
9 (1),
285.
Artículo
43 - Dago,A.E., Wigneshweraraj,S.R., Buck,M., Morett,E. (2007). A role for the conserved GAFTGA motif of AAA transcriptional activators in sensing promoter DNA conformation.
Journal of Biological Chemistry,
282 (2),
1087-1097.
Artículo
44 - Hernandez-Urzua,E., Zamorano-Sanchez,D.S., Ponce-Coria,J., Morett,E., Grogan,S., Poole,R.K., Membrillo-Hernandez,J. (2007). Multiple regulators of the Flavohaemoglobin (hmp) gene of Salmonella enterica serovar Typhimurium include RamA, a transcriptional regulator conferring the multidrug resistance phenotype.
Archives of Microbiology,
187 (1),
67-77.
Artículo; Actas Paper
45 - Aguilar-Diaz,H., Bobes,R.J., Carrero,J.C., Camacho-Carranza,R., Cervantes,C., Cevallos,M.A., Davila,G., Rodriguez-Dorantes,M., Escobedo,G., Fernandez,J.L., Fragoso,G., Gaytan,P., Garciarrubio,A., Gonzalez,V.M., Gonzalez,L., Jose,M.V., Jimenez,L., Laclette,J.P., Landa,A., Larralde,C., Morales-Montor,J., Morett,E., Ostoa-Saloma,P., Sciutto,E., Santamaria,R.I., Soberon,X., de la Torre P., Valdes,V., Yanez,J. (2006). The genome project of Taenia solium.
Parasitology International,
55 (Suppl),
S127-S130.
Artículo
46 - Avonce,N., Mendoza-Vargas,A., Morett,E., Iturriaga,G. (2006). Insights on the evolution of trehalose biosynthesis.
BMC Evolutionary Biology,
6 (1),
109.
Artículo
47 - Huerta,A.M., Francino,M.P., Morett,E., Collado-Vides,J. (2006). Selection for Unequal Densities of sigma(70) Promoter-Like Signals in Different Regions of Large Bacterial Genomes.
PLoS Genetics,
2 (11),
e185.
Artículo
48 - Gaytan,P., Yanez,J., Grande,R., Morett,E., Soberon,X. (2005). Improving random mutagenesis by purification of the oligonucleotide variants.
Combinatorial Chemistry & High Throughput Screening,
8 (6),
537-544.
Artículo
49 - Bordes,P., Wigneshweraraj,S.R., Chaney,M., Dago,A.E., Morett,E., Buck,M. (2004). Communication between Esigma, promoter DNA and the conserved threonine residue in the GAFTGA motif of the PspF sigma-dependent activator during transcription activation.
Molecular Microbiology,
54 (2),
489-506.
Artículo
50 - Ciria,R., Abreu-Goodger,C., Morett,E., Merino,E. (2004). GeConT: gene context analysis.
Bioinformatics,
20 (14),
2307-2308.
Artículo
51 - Morett,E., Garciarrubio,A. (2004). Shuffled: a software suite that assists the analysis of recombinant products resulting from DNA shuffling.
Biotechniques,
37 (3),
354-+.
Artículo
52 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P. (2003). Systematic discovery of analogous enzymes in thiamin biosynthesis.
Nature Biotechnology,
21 (7),
790-795.
Artículo; Actas
53 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P. (2002). Discovery of Analogous Enzymes in Thiamin Biosynthesis by Anticorrelation.
Genome Informatics,
13,
365-366.
Artículo
54 - Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P., Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E., Morett,E., Buck,M. (2001). Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action.
Genes and Development,
15 (17),
2282-2294.
Artículo
55 - Juarez,K., Flores,H., Davila,S., Olvera,L., Gonzalez,V., Morett,E. (2000). Reciprocal domain evolution within a transactivator in a restricted sequence space.
Proceedings of the National Academy of Sciences of the United States of America,
97 (7),
3314-3318.
Revisión
56 - Barrios,H., Valderrama,B., Morett,E. (1999). Compilation and analysis of sigma(54)-dependent promoter sequences.
Nucleic Acids Research,
27 (22),
4305-4313.
Artículo
57 - Grande,R.A., Valderrama,B., Morett,E. (1999). Suppression analysis of positive control mutants of NifA reveals two overlapping promoters for Klebsiella pneumoniae rpoN.
Journal of Molecular Biology,
294 (2),
291-298.
Artículo
58 - Morett,E., Bork,P. (1999). A novel transactivation domain in parkin.
Trends in Biochemical Sciences,
24 (6),
229-231.
Artículo
59 - Barrios,H., Grande,R., Olvera,L., Morett,E. (1998). In vivo genomic footprinting analysis reveals that the complex Bradyrhizobium japonicum fixRnifA promoter region is differently occupied by two distinct RNA polymerase holoenzymes.
Proceedings of the National Academy of Sciences of the United States of America,
95 (3),
1014-1019.
Artículo
60 - Gonzalez,V., Olvera,L., Soberon,X., Morett,E. (1998). In vivo studies on the positive control function of NifA: a conserved hydrophobic amino acid patch at the central domain involved in transcriptional activation.
Molecular Microbiology,
28 (1),
55-67.
Artículo
61 - Morett,E., Bork,P. (1998). Evolution of new protein function: recombinational enhancer Fis originated by horizontal gene transfer from the transcriptional regulator NtrC.
FEBS Letters,
433 (1-2),
108-112.
Artículo
62 - Del Rio,G., Morett,E., Soberon,X. (1997). Did cyclodextrin glycosyltransferases evolve from alpha-amylases?.
FEBS Letters,
416 (2),
221-224.
Artículo
63 - Osuna,J., Soberon,X., Morett,E. (1997). A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.
Protein Science,
6 (3),
543-555.
Artículo
64 - Valderrama,B., Davalos,A., Girard,L., Morett,E., Mora,J. (1996). Regulatory proteins and cis-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes.
Journal of Bacteriology,
178 (11),
3119-3126.
Artículo
65 - Barrios,H., Fischer,H.M., Hennecke,H., Morett,E. (1995). Overlapping promoters for two different RNA polymerase holoenzymes control Bradyrhizobium japonicum nifA expression.
Journal of Bacteriology,
177 (7),
1760-1765.
*
Revisión
66 - Morett,E., Segovia,L. (1993). The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains.
Journal of Bacteriology,
175 (19),
6067-6074.
*
Artículo
67 - Morett,E., Fischer,H.M., Hennecke,H. (1991). Influence of oxygen on DNA binding, positive control, and stability of the Bradyrhizobium japonicum NifA regulatory protein.
Journal of Bacteriology,
173 (11),
3478-3487.
*
Artículo
68 - Cannon,W.V., Kreutzer,R., Kent,H.M., Morett,E., Buck,M. (1990). Activation of the Klebsiella pneumoniae nifU promoter: identification of multiple and overlapping upstream NifA binding sites.
Nucleic Acids Research,
18 (7),
1693-1701.
*
Artículo
69 - Morett,E., Kreutzer,R., Cannon,W., Buck,M. (1990). The influence of the Klebsiella pneumoniae regulatory gene nifL upon the transcriptional activator protein NifA.
Molecular Microbiology,
4 (8),
1253-1258.
*
Artículo
70 - Morett,E., Buck,M. (1989). In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex.
Journal of Molecular Biology,
210 (1),
65-77.
*
Artículo
71 - Morett,E., Moreno,S., Espin,G. (1988). Transcription analysis of the three nifH genes of Rhizobium phaseoli with gene fusions.
MGG Molecular & General Genetics,
213 (2-3),
499-504.
*
Artículo
72 - Morett,E., Cannon,W., Buck,M. (1988). The DNA-binding domain of the transcriptional activator protein NifA resides in its carboxy terminus, recognises the upstream activator sequences of nif promoters and can be separated from the positive control function of NifA.
Nucleic Acids Research,
16 (24),
11469-11488.
*
Artículo
73 - Morett,E., Buck,M. (1988). NifA-dependent in vivo protection demonstrates that the upstream activator sequence of nif promoters is a protein binding site.
Proceedings of the National Academy of Sciences of the United States of America,
85 (24),
9401-9405.
*
Note
74 - Romero,D., Singleton,P.W., Segovia,L., Morett,E., Benbohlool,B., Palacios,R., Davila,G. (1988). Effect of Naturally Occurring nif Reiterations on Symbiotic Effectiveness in Rhizobium phaseoli.
Applied and Environmental Microbiology,
54 (3),
848-850.
*
Note
75 - Calderon,J., Morett,E., Mora,J. (1985). Omega-amidase pathway in the degradation of glutamine in Neurospora crassa.
Journal of Bacteriology,
161 (2),
807-809.
*
Artículo
76 - Morett,E., Moreno,S., Espin,G. (1985). Impaired nitrogen fixation and glutamine synthesis in methionine sulfoximine sensitive (MSs) mutants of Rhizobium phaseoli.
MGG Molecular & General Genetics,
200 (2),
229-234.
*
Nacional
77 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K. (2015). Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014.
1269-1276,
3,
Mexico D.F..
Nacional
78 - Hernandez-Eligio,J.A., Soto,L., Andrade,A., Olvera,L., Davila,S., Morett,E., Juarez-Lopez,K. (2015). Caracterización del sistema de dos componentes PilS/PilR y su mecanismo de regulación sobre el gen pilA en geobacter sulfurreducens. Environmental Biotechnology and Engineering-2014.
1277-1287,
3,
Mexico,D.F..
Internacional
79 - Tapia,J.J., Morett,E., Vallejo,E.E. (2009). A clustering genetic algorithm for genomic data mining. Foundations of Computational Intelligence .
Studies in Computational Intelligence,
249-275,
4,
Berlin, Heidelberg: Springer.
Memoria in extenso
80 - Tapia,J.J., Vallejo,E.E., Morett,E. (2009). MOCEA: A multi-objective clustering evolutionary algorithm for inferring protein-protein functional interactions. Proceedings of the 11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009.
1793-1794.
Memoria in extenso
81 - Molina-Lozano,H., Vallejo-Clemente,E.E., Morett-Sanchez,J.E. (2008). DNA sequence analysis using fuzzy grammars. IEEE International Conference on Fuzzy Systems.
1915-1921.
Memoria in extenso
82 - Martínez,M., Vallejo,E.E., Morett,E. (2007). Ancestral DNA sequence reconstruction using recursive genetic algorithms. Lecture Notes in Computer Science, vol 4828 cap 4.
390-400.
Memoria in extenso
83 - Fernandez,J.C., Vallejo,E.E., Morett,E. (2006). Fuzzy C-means for inferring functional coupling of proteins from their phylogenetic profiles. Computational Intelligence and Bioinformatics and Computational Biology, 2006. CIBCB '06. 2006 IEEE Symposium on.
1-8.
Memoria in extenso
84 - Watanabe,R., Vallejo,E.E., Morett,E. (2006). Inferring functional coupling of proteins using the Evolutionary Bond Energy Algorithm. Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06.
400-405.
Internacional
Nacional
86 - Morett,E. (2001). Genetic regulation of nitrogen fixation: from ammonia ssimilation to protein evolution. Nitrogen Fixation Research Center XX Anniversary.
180-183.
nacional divulgación
87 - Aguilar,I., Guzman,J., Miron,F., Morett,E. (2021). Conociendo el Genoma Indígena Mexicano: el proyecto 100G-MX.
Biotecnologia en Movimiento.Revista de divulgación del Instituto de Biotecnología de la UNAM,
26,
8-15.
88 - Morett Sanchez, Juan Enrique (1987). - Analisis transcripcional de los genes reiterados de la nitrogenasa reductasa en Rhizobium phaseoli / tesis que para obtener el grado de presenta Juan Enrique Morett Sanchez ; asesor Elda Guadalupe Espin Ocampo.
CIFN,
Maestria en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe
89 - Morett Sanchez, Juan Enrique (1984). Obtencion y analisis de mutaciones que afectan la actividad de la nitrogenasa y de un glutamino sintetasa en rhizobium phaseoli.
CIFN,
Licenciatura en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe
Revisión
90 - Aguilar-Ordonez,I., Guzman-Linares,J., Ballesteros-Villascan,J., Miron-Toruno,F., Perez-Gonzalez,A., Garcia-Lopez,J., Cruz-Lopez,F., Morett,E.. A Tale of Native American Whole-Genome Sequencing and Other Technologies.
Diversity,
14 (8),
647.
Artículo
91 - Aguilar-Ordonez,I., Perez-Villatoro,F., Garcia-Ortiz,H., Barajas-Olmos,F., Ballesteros-Villascan,J., Gonzalez-Buenfil,R., Fresno,C., Garciarrubio,A., Fernandez-Lopez,J.C., Tovar,H., Hernandez-Lemus,E., Orozco,L., Soberon,X., Morett,E.. Whole genome variation in 27 Mexican indigenous populations, demographic and biomedical insights.
PLoS ONE,
16 (4),
e0249773,
[correction May 25 2022].
Artículo
92 - Andrade,A., Hernandez-Eligio,A., Tirado,A.L., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K.. Specialization of the Reiterated Copies of the Heterodimeric Integration Host Factor Genes in Geobacter sulfurreducens.
Frontiers in Microbiology,
12,
626443.
Artículo
93 - Lara,P., Vega-Alvarado,L., Sahonero-Canavesi,D.X., Koenen,M., Villanueva,L., Riveros-McKay,F., Morett,E., Juarez,K.. Transcriptome Analysis Reveals Cr(VI) Adaptation Mechanisms in Klebsiella sp. Strain AqSCr.
Frontiers in Microbiology,
12,
656589.
Artículo
94 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A.. High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth.
PLoS ONE,
16 (3),
e0248513.
nacional divulgación
95 - Aguilar,I., Guzman,J., Miron,F., Morett,E.. Conociendo el Genoma Indígena Mexicano: el proyecto 100G-MX.
Biotecnologia en Movimiento.Revista de divulgación del Instituto de Biotecnología de la UNAM,
26,
8-15.
Artículo
96 - Jasso-Chavez,R., Lira-Silva,E., Gonzalez-Sanchez,K., Larios-Serrato,V., Mendoza-Monzoy,D.L., Perez-Villatoro,F., Morett,E., Vega-Segura,A., Torres-Marquez,M.E., Zepeda-Rodriguez,A., Moreno-Sanchez,R.. Marine Archaeon Methanosarcina acetivorans Enhances Polyphosphate Metabolism Under Persistent Cadmium Stress.
Frontiers in Microbiology,
10,
2432.
Artículo; Actas Paper
97 - Hernandez-Eligio, A., Andrade, A., Soto, L., Morett, E., Juarez, K.. The unphosphorylated form of the PilR two-component system regulates pilA gene expression in Geobacter sulfurreducens.
Environmental Science and Pollution Research,
24 (33),
25693-25701.
Artículo; Actas Paper
98 - Lara, P., Morett, E., Juarez, K.. Acetate biostimulation as an effective treatment for cleaning up alkaline soil highly contaminated with Cr(VI).
Environmental Science and Pollution Research,
24 (33),
25513-25521.
Artículo
99 - Romero-Hidalgo, S., Ochoa-Leyva, A., Garciarrubio, A., Acuna-Alonzo, V., Antunez-Arguelles, E., Balcazar-Quintero, M., Barquera-Lozano, R., Carnevale, A., Cornejo-Granados, F., Fernandez-Lopez, J.C., Garcia-Herrera, R., Garcia-Ortiz, H., Granados-Silvestre, A., Granados, J., Guerrero-Romero, F., Hernandez-Lemus, E., Leon-Mimila, P., Macin-Perez, G., Martinez-Hernandez, A., Menjivar, M., Morett, E., Orozco, L., Ortiz-Lopez, G., Perez-Villatoro, F., Rivera-Morales, J., Riveros-McKay, F., Villalobos-Comparan, M., Villamil-Ramirez, H., Villarreal-Molina, T., Canizales-Quinteros, S., Soberon, X.. Demographic history and biologically relevant genetic variation of Native Mexicans inferred from whole-genome sequencing.
Nature Communications,
8 (1),
1005.
Artículo
100 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K.. Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors.
Fems Microbiology Letters,
363 (17),
fnw175.
Nacional
101 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K.. Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014.
1269-1276,
3,
Mexico D.F..
Nacional
102 - Hernandez-Eligio,J.A., Soto,L., Andrade,A., Olvera,L., Davila,S., Morett,E., Juarez-Lopez,K.. Caracterización del sistema de dos componentes PilS/PilR y su mecanismo de regulación sobre el gen pilA en geobacter sulfurreducens. Environmental Biotechnology and Engineering-2014.
1277-1287,
3,
Mexico,D.F..
Artículo
103 - Gallarato,L.A., Sanchez,D.G., Olvera,L., Primo,E.D., Garrido,M.N., Beassoni,P.R., Morett,E., Lisa,A.T.. Exopolyphosphatase of Pseudomonas aeruginosa is essential for the production of virulence factors and its expression is controlled by NtrC and PhoB, acting at two interspaced promoters.
Microbiology,
160 (2),
406-417.
Artículo
104 - Meysman,P., Collado-Vides,J., Morett,E., Viola,R., Engelen,K., Laukens,K.. Structural properties of prokaryotic promoter regions correlate with functional features.
PLoS ONE,
9 (2),
e88717.
Artículo
105 - Balderas-Martinez,Y.I., Savageau,M., Salgado,H., Perez-Rueda,E., Morett,E., Collado-Vides,J.. Transcription Factors in Escherichia coli Prefer the Holo Conformation.
PLoS ONE,
8 (6),
e65723.
Artículo
106 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J.. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Research,
41 (D1),
D203-D213.
Artículo
107 - Weiss,V., Medina-Rivera,A., Huerta,A.M., Santos-Zavaleta,A., Salgado,H., Morett,E., Collado-Vides,J.. Evidence classification of high-throughput protocols and confidence integration in RegulonDB.
Database (Oxford),
2013,
bas059.
Artículo
108 - Aguilar,C., Escalante,A., FLORES,N., de Anda,R., Riveros-McKay,F., Gosset,G., Morett,E., Bolivar,F.. Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system.
BMC Genomics,
13 (1),
385.
Artículo
109 - Flores,H., Lin,S., Contreras-Ferrat,G., Cronan,J.E., Morett,E.. Evolution of a new function in an esterase: simple amino acid substitutions enable the activity present in the larger paralog, BioH.
Protein Engineering Design & Selection,
25 (8),
387-395.
Artículo
110 - Gallego-Hernandez,A.L., Hernandez-Lucas,I., De la Cruz,M.A., Olvera,L., Morett,E., Medina-Aparicio,L., Ramirez-Trujillo,J.A., Vazquez,A., Fernandez-Mora,M., Calva,E.. Transcriptional regulation of the assT-dsbL-dsbI gene cluster depends on LeuO, H-NS and specific growth conditions in Salmonella enterica serovar Typhi IMSS-1.
Journal of Bacteriology,
194 (9),
2254-2264.
Artículo
111 - Saab-Rincon,G., Olvera,L., Olvera,M., Rudino-Pinera,E., Benites,E., Soberon,X., Morett,E.. Evolutionary Walk between (beta/alpha)(8) Barrels: Catalytic Migration from Triosephosphate Isomerase to Thiamin Phosphate Synthase.
Journal of Molecular Biology,
416 (2),
255-270.
Artículo
112 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J.. RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Research,
39 (Suppl 1),
D98-D105.
Artículo
113 - Massimelli,M.J., Sanchez,D.G., Buchieri,M.V., Olvera,L., Beassoni,P.R., Schweizer,H.P., Morett,E., Lisa,A.T.. Choline catabolism, sigma(54) factor and NtrC are required for the full expression of the Pseudomonas aeruginosa phosphorylcholine phosphatase gene.
Microbiological Research,
166 (5),
380-390.
Revisión
114 - Collado-Vides,J., Salgado,H., Morett,E., Gama-Castro,S., Jimenez-Jacinto,V., Martinez-Flores,I., Medina-Rivera,A., Muniz-Rascado,L., Peralta-Gil,M., Santos-Zavaleta,A.. Bioinformatics resources for the study of gene regulation in bacteria.
Journal of Bacteriology,
191 (1),
23-31.
Artículo
115 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E.. Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli.
PLoS ONE,
4 (10),
e7526.
Artículo
116 - Olvera,L., Mendoza-Vargas,A., FLORES,N., Olvera,M., Sigala,J.C., Gosset,G., Morett,E., Bolivar,F.. Transcription Analysis of Central Metabolism Genes in Escherichia coli. Possible Roles of a38 in Their Expression, as a Response to Carbon Limitation.
PLoS ONE,
4 (10),
e7466.
Internacional
117 - Tapia,J.J., Morett,E., Vallejo,E.E.. A clustering genetic algorithm for genomic data mining. Foundations of Computational Intelligence .
Studies in Computational Intelligence,
249-275,
4,
Berlin, Heidelberg: Springer.
Memoria in extenso
118 - Tapia,J.J., Vallejo,E.E., Morett,E.. MOCEA: A multi-objective clustering evolutionary algorithm for inferring protein-protein functional interactions. Proceedings of the 11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009.
1793-1794.
Artículo
119 - Gama-Castro,S., Jimenez-Jacinto,V., Peralta-Gil,M., Santos-Zavaleta,A., Penaloza-Spinola,M.I., Contreras-Moreira,B., Segura-Salazar,J., Muniz-Rascado,L., Martinez-Flores,I., Salgado,H., Bonavides-Martinez,C., Abreu-Goodger,C., Rodriguez-Penagos,C., Miranda-Rios,J., Morett,E., Merino,E., Huerta,A.M., Trevino-Quintanilla,L., Collado-Vides,J.. RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Research,
36 (Database issue),
D120-D124.
Artículo
120 - Morett,E., Saab-Rincon,G., Olvera,L., Olvera,M., Flores,H., Grande,R.. Sensitive Genome-Wide Screen for Low Secondary Enzymatic Activities: The YjbQ Family Shows Thiamin Phosphate Synthase Activity.
Journal of Molecular Biology,
376 (3),
839-853.
Artículo
121 - Watanabe,R.L., Morett,E., Vallejo,E.E.. Inferring modules of functionally interacting proteins using the Bond Energy Algorithm.
BMC Bioinformatics,
9 (1),
285.
Memoria in extenso
122 - Molina-Lozano,H., Vallejo-Clemente,E.E., Morett-Sanchez,J.E.. DNA sequence analysis using fuzzy grammars. IEEE International Conference on Fuzzy Systems.
1915-1921.
Artículo
123 - Dago,A.E., Wigneshweraraj,S.R., Buck,M., Morett,E.. A role for the conserved GAFTGA motif of AAA transcriptional activators in sensing promoter DNA conformation.
Journal of Biological Chemistry,
282 (2),
1087-1097.
Artículo
124 - Hernandez-Urzua,E., Zamorano-Sanchez,D.S., Ponce-Coria,J., Morett,E., Grogan,S., Poole,R.K., Membrillo-Hernandez,J.. Multiple regulators of the Flavohaemoglobin (hmp) gene of Salmonella enterica serovar Typhimurium include RamA, a transcriptional regulator conferring the multidrug resistance phenotype.
Archives of Microbiology,
187 (1),
67-77.
Memoria in extenso
125 - Martínez,M., Vallejo,E.E., Morett,E.. Ancestral DNA sequence reconstruction using recursive genetic algorithms. Lecture Notes in Computer Science, vol 4828 cap 4.
390-400.
Artículo; Actas Paper
126 - Aguilar-Diaz,H., Bobes,R.J., Carrero,J.C., Camacho-Carranza,R., Cervantes,C., Cevallos,M.A., Davila,G., Rodriguez-Dorantes,M., Escobedo,G., Fernandez,J.L., Fragoso,G., Gaytan,P., Garciarrubio,A., Gonzalez,V.M., Gonzalez,L., Jose,M.V., Jimenez,L., Laclette,J.P., Landa,A., Larralde,C., Morales-Montor,J., Morett,E., Ostoa-Saloma,P., Sciutto,E., Santamaria,R.I., Soberon,X., de la Torre P., Valdes,V., Yanez,J.. The genome project of Taenia solium.
Parasitology International,
55 (Suppl),
S127-S130.
Artículo
127 - Avonce,N., Mendoza-Vargas,A., Morett,E., Iturriaga,G.. Insights on the evolution of trehalose biosynthesis.
BMC Evolutionary Biology,
6 (1),
109.
Artículo
128 - Huerta,A.M., Francino,M.P., Morett,E., Collado-Vides,J.. Selection for Unequal Densities of sigma(70) Promoter-Like Signals in Different Regions of Large Bacterial Genomes.
PLoS Genetics,
2 (11),
e185.
Memoria in extenso
129 - Fernandez,J.C., Vallejo,E.E., Morett,E.. Fuzzy C-means for inferring functional coupling of proteins from their phylogenetic profiles. Computational Intelligence and Bioinformatics and Computational Biology, 2006. CIBCB '06. 2006 IEEE Symposium on.
1-8.
Memoria in extenso
130 - Watanabe,R., Vallejo,E.E., Morett,E.. Inferring functional coupling of proteins using the Evolutionary Bond Energy Algorithm. Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06.
400-405.
Artículo
131 - Gaytan,P., Yanez,J., Grande,R., Morett,E., Soberon,X.. Improving random mutagenesis by purification of the oligonucleotide variants.
Combinatorial Chemistry & High Throughput Screening,
8 (6),
537-544.
Artículo
132 - Bordes,P., Wigneshweraraj,S.R., Chaney,M., Dago,A.E., Morett,E., Buck,M.. Communication between Esigma, promoter DNA and the conserved threonine residue in the GAFTGA motif of the PspF sigma-dependent activator during transcription activation.
Molecular Microbiology,
54 (2),
489-506.
Artículo
133 - Ciria,R., Abreu-Goodger,C., Morett,E., Merino,E.. GeConT: gene context analysis.
Bioinformatics,
20 (14),
2307-2308.
Artículo
134 - Morett,E., Garciarrubio,A.. Shuffled: a software suite that assists the analysis of recombinant products resulting from DNA shuffling.
Biotechniques,
37 (3),
354-+.
Artículo
135 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P.. Systematic discovery of analogous enzymes in thiamin biosynthesis.
Nature Biotechnology,
21 (7),
790-795.
Internacional
Artículo; Actas
137 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P.. Discovery of Analogous Enzymes in Thiamin Biosynthesis by Anticorrelation.
Genome Informatics,
13,
365-366.
Artículo
138 - Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P., Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E., Morett,E., Buck,M.. Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action.
Genes and Development,
15 (17),
2282-2294.
Nacional
139 - Morett,E.. Genetic regulation of nitrogen fixation: from ammonia ssimilation to protein evolution. Nitrogen Fixation Research Center XX Anniversary.
180-183.
Artículo
140 - Juarez,K., Flores,H., Davila,S., Olvera,L., Gonzalez,V., Morett,E.. Reciprocal domain evolution within a transactivator in a restricted sequence space.
Proceedings of the National Academy of Sciences of the United States of America,
97 (7),
3314-3318.
Revisión
141 - Barrios,H., Valderrama,B., Morett,E.. Compilation and analysis of sigma(54)-dependent promoter sequences.
Nucleic Acids Research,
27 (22),
4305-4313.
Artículo
142 - Grande,R.A., Valderrama,B., Morett,E.. Suppression analysis of positive control mutants of NifA reveals two overlapping promoters for Klebsiella pneumoniae rpoN.
Journal of Molecular Biology,
294 (2),
291-298.
Artículo
143 - Morett,E., Bork,P.. A novel transactivation domain in parkin.
Trends in Biochemical Sciences,
24 (6),
229-231.
Artículo
144 - Barrios,H., Grande,R., Olvera,L., Morett,E.. In vivo genomic footprinting analysis reveals that the complex Bradyrhizobium japonicum fixRnifA promoter region is differently occupied by two distinct RNA polymerase holoenzymes.
Proceedings of the National Academy of Sciences of the United States of America,
95 (3),
1014-1019.
Artículo
145 - Gonzalez,V., Olvera,L., Soberon,X., Morett,E.. In vivo studies on the positive control function of NifA: a conserved hydrophobic amino acid patch at the central domain involved in transcriptional activation.
Molecular Microbiology,
28 (1),
55-67.
Artículo
146 - Morett,E., Bork,P.. Evolution of new protein function: recombinational enhancer Fis originated by horizontal gene transfer from the transcriptional regulator NtrC.
FEBS Letters,
433 (1-2),
108-112.
Artículo
147 - Del Rio,G., Morett,E., Soberon,X.. Did cyclodextrin glycosyltransferases evolve from alpha-amylases?.
FEBS Letters,
416 (2),
221-224.
Artículo
148 - Osuna,J., Soberon,X., Morett,E.. A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.
Protein Science,
6 (3),
543-555.
Artículo
149 - Valderrama,B., Davalos,A., Girard,L., Morett,E., Mora,J.. Regulatory proteins and cis-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes.
Journal of Bacteriology,
178 (11),
3119-3126.
Artículo
150 - Barrios,H., Fischer,H.M., Hennecke,H., Morett,E.. Overlapping promoters for two different RNA polymerase holoenzymes control Bradyrhizobium japonicum nifA expression.
Journal of Bacteriology,
177 (7),
1760-1765.
*
Revisión
151 - Morett,E., Segovia,L.. The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains.
Journal of Bacteriology,
175 (19),
6067-6074.
*
Artículo
152 - Morett,E., Fischer,H.M., Hennecke,H.. Influence of oxygen on DNA binding, positive control, and stability of the Bradyrhizobium japonicum NifA regulatory protein.
Journal of Bacteriology,
173 (11),
3478-3487.
*
Artículo
153 - Cannon,W.V., Kreutzer,R., Kent,H.M., Morett,E., Buck,M.. Activation of the Klebsiella pneumoniae nifU promoter: identification of multiple and overlapping upstream NifA binding sites.
Nucleic Acids Research,
18 (7),
1693-1701.
*
Artículo
154 - Morett,E., Kreutzer,R., Cannon,W., Buck,M.. The influence of the Klebsiella pneumoniae regulatory gene nifL upon the transcriptional activator protein NifA.
Molecular Microbiology,
4 (8),
1253-1258.
*
Artículo
155 - Morett,E., Buck,M.. In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex.
Journal of Molecular Biology,
210 (1),
65-77.
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Artículo
156 - Morett,E., Moreno,S., Espin,G.. Transcription analysis of the three nifH genes of Rhizobium phaseoli with gene fusions.
MGG Molecular & General Genetics,
213 (2-3),
499-504.
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Artículo
157 - Morett,E., Cannon,W., Buck,M.. The DNA-binding domain of the transcriptional activator protein NifA resides in its carboxy terminus, recognises the upstream activator sequences of nif promoters and can be separated from the positive control function of NifA.
Nucleic Acids Research,
16 (24),
11469-11488.
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Artículo
158 - Morett,E., Buck,M.. NifA-dependent in vivo protection demonstrates that the upstream activator sequence of nif promoters is a protein binding site.
Proceedings of the National Academy of Sciences of the United States of America,
85 (24),
9401-9405.
*
Note
159 - Romero,D., Singleton,P.W., Segovia,L., Morett,E., Benbohlool,B., Palacios,R., Davila,G.. Effect of Naturally Occurring nif Reiterations on Symbiotic Effectiveness in Rhizobium phaseoli.
Applied and Environmental Microbiology,
54 (3),
848-850.
*
160 - Morett Sanchez, Juan Enrique. - Analisis transcripcional de los genes reiterados de la nitrogenasa reductasa en Rhizobium phaseoli / tesis que para obtener el grado de presenta Juan Enrique Morett Sanchez ; asesor Elda Guadalupe Espin Ocampo.
CIFN,
Maestria en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe
Note
161 - Calderon,J., Morett,E., Mora,J.. Omega-amidase pathway in the degradation of glutamine in Neurospora crassa.
Journal of Bacteriology,
161 (2),
807-809.
*
Artículo
162 - Morett,E., Moreno,S., Espin,G.. Impaired nitrogen fixation and glutamine synthesis in methionine sulfoximine sensitive (MSs) mutants of Rhizobium phaseoli.
MGG Molecular & General Genetics,
200 (2),
229-234.
*
163 - Morett Sanchez, Juan Enrique. Obtencion y analisis de mutaciones que afectan la actividad de la nitrogenasa y de un glutamino sintetasa en rhizobium phaseoli.
CIFN,
Licenciatura en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe