Dr. Juan Miranda Rios
Ex-colaborador y/o ex-alumno
Total de publicaciones: 32
- Tipo
- Fecha
Artículo
1 - Fernandez-Luna,M.T., Lanz-Mendoza,H., Gill,S.S., Bravo,A., Soberon,M., Miranda-Rios,J. (2010). An alpha-amylase is a novel receptor for Bacillus thuringiensis ssp. israelensis Cry4Ba and Cry11Aa toxins in the malaria vector mosquito Anopheles albimanus (Diptera: Culicidae).
Environmental Microbiology,
12 (3),
746-757.
Artículo
2 - Fernandez-Luna,M.T., Tabashnik,B.E., Lanz-Mendoza,H., Bravo,A., Soberon,M., Miranda-Rios,J. (2010). Single concentration tests show synergism among Bacillus thuringiensis subsp. israelensis toxins against the malaria vector mosquito Anophelesalbimanus.
Journal of Invertebrate Pathology,
104 (3),
231-233.
Artículo
3 - Gama-Castro,S., Jimenez-Jacinto,V., Peralta-Gil,M., Santos-Zavaleta,A., Penaloza-Spinola,M.I., Contreras-Moreira,B., Segura-Salazar,J., Muniz-Rascado,L., Martinez-Flores,I., Salgado,H., Bonavides-Martinez,C., Abreu-Goodger,C., Rodriguez-Penagos,C., Miranda-Rios,J., Morett,E., Merino,E., Huerta,A.M., Trevino-Quintanilla,L., Collado-Vides,J. (2008). RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Research,
36 (Database issue),
D120-D124.
Artículo
4 - Ontiveros-Palacios,N., Smith,A.M., Grundy,F.J., Soberon,M., Henkin,T.M., Miranda-Rios,J. (2008). Molecular basis of gene regulation by the THI-box riboswitch.
Molecular Microbiology,
67 (4),
793-803.
Artículo
5 - Taboada,H., Encarnacion,S., Vargas,Mdel C., Mora,Y., Miranda-Rios,J., Soberon,M., Mora,J. (2008). Thiamine limitation determines the transition from aerobic to fermentative-like metabolism in Rhizobium etli CE3.
Fems Microbiology Letters,
279 (1),
48-55.
Revisión
6 - Miranda-Rios,J. (2007). The THI-box riboswitch, or how RNA binds thiamin pyrophosphate.
Structure,
15 (3),
259-265.
Artículo
7 - Gomez,I., Arenas,I., Benitez,I., Miranda-Rios,J., Becerril,B., Grande,R., Almagro,J.C., Bravo,A., Soberon,M. (2006). Specific epitopes of domains II and IIII of bacillus thuringiensis Cry1Ab toxin involved in the sequential interaction with cadherin and aminopeptidase-N receptors in manduca sexta.
Journal of Biological Chemistry,
281 (45),
34032-34039.
Artículo
8 - Pena,G., Miranda-Rios,J., de la Riva,G., Pardo-Lopez,L., Soberon,M., Bravo,A. (2006). A Bacillus thuringiensis S-Layer Protein Involved in Toxicity against Epilachna varivestis (Coleoptera: Coccinellidae).
Applied and Environmental Microbiology,
72 (1),
353-360.
Artículo
9 - Kawano,M., Reynolds,A.A., Miranda-Rios,J., Storz,G. (2005). Detection of 5'- and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coli.
Nucleic Acids Research,
33 (3),
1040-1050.
Artículo
10 - Mohammad,A., Miranda-Rios,J., Estrada-Navarrete,G., Quinto,C., Olivares,J., Garcia-Ponce,B., Sanchez,F. (2004). Nodulin 22 from Phaseolus vulgaris protects Escherichia coli cells from oxidative stress.
Planta,
219 (6),
993-1002.
Artículo
11 - Gomez,I., Miranda-Rios,J., Rudino-Pinera,E., Oltean,D.I., Gill,S.S., Bravo,A., Soberon,M. (2002). Hydropathic complementarity determines interaction of epitope 869HITDTNNK876 in Manduca sexta Bt-R1 receptor with loop 2 of domain II of Bacillus thuringiensis Cry1A toxins.
Journal of Biological Chemistry,
277 (33),
30137-30143.
Artículo
12 - Lopez,O., Morera,C., Miranda-Rios,J., Girard,L., Romero,D., Soberon,M. (2001). Regulation of Gene Expression in Response to Oxygen in Rhizobium etli: Role of FnrN in fixNOQP Expression and in Symbiotic Nitrogen Fixation.
Journal of Bacteriology,
183 (24),
6999-7006.
Artículo
13 - Miranda-Rios,J., Navarro,M., Soberon,M. (2001). A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria.
Proceedings of the National Academy of Sciences of the United States of America,
98 (17),
9736-9741.
Artículo
14 - Soberon,M., Morera,C., Kondorosi,A., Lopez,O., Miranda,J. (2001). A purine-related metabolite negatively regulates fixNOQP expression in Sinorhizobium meliloti by modulation of fixK expression.
Molecular Plant-Microbe Interactions,
14 (4),
572-576.
Artículo
15 - Reyes,J.D., Tabche,M.L., Morera,C., Girard,M.L., Romero,D., Krol,E., Miranda,J., Soberon,M. (2000). Expression pattern of Rhizobium etli ccmIEFH genes involved in c-type cytochrome maturation.
Gene,
250 (1-2),
149-157.
Artículo
16 - Soberon,M., Lopez,O., Morera,C., Girard,M.L., Tabche,M.L., Miranda,J. (1999). Enhanced nitrogen fixation in a rhizobium etli ntrC mutant that overproduces the bradyrhizobium japonicum symbiotic terminal oxidase cbb3.
Applied and Environmental Microbiology,
65 (5),
2015-2019.
Artículo
17 - Tabche,M.L., Garcia,E.G., Miranda,J., Escamilla,J.E., Soberon,M. (1998). Rhizobium etli cycHJKL gene locus involved in c-type cytochrome biogenesis: sequence analysis and characterization of two cycH mutants.
Gene,
208 (2),
215-219.
Artículo
18 - Yurgel,S.N., Soberon,M., Sharypova,L.A., Miranda,J., Morera,C., Simarov,B.V. (1998). Isolation of Sinorhizobium meliloti Tn5 mutants with altered cytochrome terminal oxidase expression and improved symbiotic performance.
Fems Microbiology Letters,
165 (1),
167-173.
Artículo
19 - Miranda-Rios,J., Morera,C., Taboada,H., Davalos,A., Encarnacion,S., Mora,J., Soberon,M. (1997). Expression of thiamin biosynthetic genes (thiCOGE) and production of symbiotic terminal oxidase cbb3 in Rhizobium etli.
Journal of Bacteriology,
179 (22),
6887-6893.
Artículo
20 - Soberon,M., Lopez,O., Miranda,J., Tabche,M.L., Morera,C. (1997). Genetic evidence for 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) as a negative effector of cytochrome terminal oxidase cbb3 production in Rhizobium etli.
Molecular and General Genetics,
254 (6),
665-673.
Artículo
21 - Miranda,J., Membrillo-Hernandez,J., Tabche,M.L., Soberon,M. (1996). Rhizobium etli cytochrome mutants with derepressed expression of cytochrome terminal oxidases and enhanced symbiotic nitrogen accumulation.
Applied Microbiology and Biotechnology,
45 (1-2),
182-188.
Artículo
22 - Hernandez-Lucas,I., Pardo,M.A., Segovia,L., Miranda,J., Martinez-Romero,E. (1995). Rhizobium tropici chromosomal citrate synthase gene.
Applied and Environmental Microbiology,
61 (11),
3992-3997.
*
Artículo
23 - Navarro,Y., Miranda,J., Soberon,M. (1995). CYTOCHROME EXPRESSION IN 2 STRAINS OF BRADYRHIZOBIUM SPECIES.
Asia-Pacific Journal Of Molecular Biology And Biotechnology,
3 (4),
327-331.
Artículo
24 - Padilla,J.E., Miranda,J., Sanchez,F. (1991). NODULIN REGULATION IN COMMON BEAN NODULES INDUCED BY BACTERIAL MUTANTS.
Molecular Plant-Microbe Interactions,
4 (5),
433-439.
*
Artículo
25 - Miranda-Rios,J., Sanchez-Pescador,R., Urdea,M., Covarrubias,A.A. (1987). The complete nucleotide sequence of the glnALG operon of Escherichia coli K12.
Nucleic Acids Research,
15 (6),
2757-2770.
*
Artículo
26 - Garat,B., Miranda,J., Charli,J.L., Joseph-Bravo,P. (1985). Presence of a membrane bound pyroglutamyl amino peptidase degrading thyrotropin releasing hormone in rat brain.
Neuropeptides,
6 (1),
27-40.
Nacional
27 - Miranda-Rios,J., Soberon,M. (2008). Cronología del descubrimiento de los riboswitches (ARN que regula la expresión genética). Una ventana al quehacer científico. Instituto de Biotecnología de la UNAM 25 aniversario, cap 8.
87-96,
Mexico, D.F..
Memoria in extenso
28 - Gomez,I., Miranda-Rios,J., Arenas,I., Grande,R., Becerril,B., Bravo,A., Soberon,M. (2007). Identification of scFv Molecules that Recognize Loop 3 of Domain II and Domain III of Cry1Ab Toxin from Bacillus thuringiensis. 6th Pacific Rim Conference on the biotechnology of Bacillus thuringiensis and its Environmental Impact .
12-14,
Montreal.
Editorial Material
29 - Fernandez-Luna,M.T., Miranda-Rios,J. (2008). Riboswitch folding: one at a time and step by step.
RNA Biology,
5 (1),
20-23.
30 - Miranda Rios, Juan (1995). Genetica molecular de genes involucrados en la expresion de oxidasas terminales en Rhizobium etli .
Instituto de Biotecnologia,
Doctorado en Biotecnologia,
UNAM.
Asesor: Soberon Chavez, Mario
31 - Miranda Rios, Juan (1991). Aislamiento de nodulinas tempranas de frijol (Phaseolus vulgaris).
Instituto de Biotecnologia,
Maestria en Investigacion Biomedica,
UNAM.
Asesor: Sanchez, Federico
32 - Miranda Rios, Juan (1986). Estudios sobre la regulacion de la expresion del aperon GLNALG de escherichia coli .
CIFN,
Licenciatura en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Coavrrubias Robles, Alejandra
Artículo
33 - Fernandez-Luna,M.T., Lanz-Mendoza,H., Gill,S.S., Bravo,A., Soberon,M., Miranda-Rios,J.. An alpha-amylase is a novel receptor for Bacillus thuringiensis ssp. israelensis Cry4Ba and Cry11Aa toxins in the malaria vector mosquito Anopheles albimanus (Diptera: Culicidae).
Environmental Microbiology,
12 (3),
746-757.
Artículo
34 - Fernandez-Luna,M.T., Tabashnik,B.E., Lanz-Mendoza,H., Bravo,A., Soberon,M., Miranda-Rios,J.. Single concentration tests show synergism among Bacillus thuringiensis subsp. israelensis toxins against the malaria vector mosquito Anophelesalbimanus.
Journal of Invertebrate Pathology,
104 (3),
231-233.
Artículo
35 - Gama-Castro,S., Jimenez-Jacinto,V., Peralta-Gil,M., Santos-Zavaleta,A., Penaloza-Spinola,M.I., Contreras-Moreira,B., Segura-Salazar,J., Muniz-Rascado,L., Martinez-Flores,I., Salgado,H., Bonavides-Martinez,C., Abreu-Goodger,C., Rodriguez-Penagos,C., Miranda-Rios,J., Morett,E., Merino,E., Huerta,A.M., Trevino-Quintanilla,L., Collado-Vides,J.. RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Research,
36 (Database issue),
D120-D124.
Artículo
36 - Ontiveros-Palacios,N., Smith,A.M., Grundy,F.J., Soberon,M., Henkin,T.M., Miranda-Rios,J.. Molecular basis of gene regulation by the THI-box riboswitch.
Molecular Microbiology,
67 (4),
793-803.
Artículo
37 - Taboada,H., Encarnacion,S., Vargas,Mdel C., Mora,Y., Miranda-Rios,J., Soberon,M., Mora,J.. Thiamine limitation determines the transition from aerobic to fermentative-like metabolism in Rhizobium etli CE3.
Fems Microbiology Letters,
279 (1),
48-55.
Nacional
38 - Miranda-Rios,J., Soberon,M.. Cronología del descubrimiento de los riboswitches (ARN que regula la expresión genética). Una ventana al quehacer científico. Instituto de Biotecnología de la UNAM 25 aniversario, cap 8.
87-96,
Mexico, D.F..
Editorial Material
39 - Fernandez-Luna,M.T., Miranda-Rios,J.. Riboswitch folding: one at a time and step by step.
RNA Biology,
5 (1),
20-23.
Revisión
40 - Miranda-Rios,J.. The THI-box riboswitch, or how RNA binds thiamin pyrophosphate.
Structure,
15 (3),
259-265.
Memoria in extenso
41 - Gomez,I., Miranda-Rios,J., Arenas,I., Grande,R., Becerril,B., Bravo,A., Soberon,M.. Identification of scFv Molecules that Recognize Loop 3 of Domain II and Domain III of Cry1Ab Toxin from Bacillus thuringiensis. 6th Pacific Rim Conference on the biotechnology of Bacillus thuringiensis and its Environmental Impact .
12-14,
Montreal.
Artículo
42 - Gomez,I., Arenas,I., Benitez,I., Miranda-Rios,J., Becerril,B., Grande,R., Almagro,J.C., Bravo,A., Soberon,M.. Specific epitopes of domains II and IIII of bacillus thuringiensis Cry1Ab toxin involved in the sequential interaction with cadherin and aminopeptidase-N receptors in manduca sexta.
Journal of Biological Chemistry,
281 (45),
34032-34039.
Artículo
43 - Pena,G., Miranda-Rios,J., de la Riva,G., Pardo-Lopez,L., Soberon,M., Bravo,A.. A Bacillus thuringiensis S-Layer Protein Involved in Toxicity against Epilachna varivestis (Coleoptera: Coccinellidae).
Applied and Environmental Microbiology,
72 (1),
353-360.
Artículo
44 - Kawano,M., Reynolds,A.A., Miranda-Rios,J., Storz,G.. Detection of 5'- and 3'-UTR-derived small RNAs and cis-encoded antisense RNAs in Escherichia coli.
Nucleic Acids Research,
33 (3),
1040-1050.
Artículo
45 - Mohammad,A., Miranda-Rios,J., Estrada-Navarrete,G., Quinto,C., Olivares,J., Garcia-Ponce,B., Sanchez,F.. Nodulin 22 from Phaseolus vulgaris protects Escherichia coli cells from oxidative stress.
Planta,
219 (6),
993-1002.
Artículo
46 - Gomez,I., Miranda-Rios,J., Rudino-Pinera,E., Oltean,D.I., Gill,S.S., Bravo,A., Soberon,M.. Hydropathic complementarity determines interaction of epitope 869HITDTNNK876 in Manduca sexta Bt-R1 receptor with loop 2 of domain II of Bacillus thuringiensis Cry1A toxins.
Journal of Biological Chemistry,
277 (33),
30137-30143.
Artículo
47 - Lopez,O., Morera,C., Miranda-Rios,J., Girard,L., Romero,D., Soberon,M.. Regulation of Gene Expression in Response to Oxygen in Rhizobium etli: Role of FnrN in fixNOQP Expression and in Symbiotic Nitrogen Fixation.
Journal of Bacteriology,
183 (24),
6999-7006.
Artículo
48 - Miranda-Rios,J., Navarro,M., Soberon,M.. A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria.
Proceedings of the National Academy of Sciences of the United States of America,
98 (17),
9736-9741.
Artículo
49 - Soberon,M., Morera,C., Kondorosi,A., Lopez,O., Miranda,J.. A purine-related metabolite negatively regulates fixNOQP expression in Sinorhizobium meliloti by modulation of fixK expression.
Molecular Plant-Microbe Interactions,
14 (4),
572-576.
Artículo
50 - Reyes,J.D., Tabche,M.L., Morera,C., Girard,M.L., Romero,D., Krol,E., Miranda,J., Soberon,M.. Expression pattern of Rhizobium etli ccmIEFH genes involved in c-type cytochrome maturation.
Gene,
250 (1-2),
149-157.
Artículo
51 - Soberon,M., Lopez,O., Morera,C., Girard,M.L., Tabche,M.L., Miranda,J.. Enhanced nitrogen fixation in a rhizobium etli ntrC mutant that overproduces the bradyrhizobium japonicum symbiotic terminal oxidase cbb3.
Applied and Environmental Microbiology,
65 (5),
2015-2019.
Artículo
52 - Tabche,M.L., Garcia,E.G., Miranda,J., Escamilla,J.E., Soberon,M.. Rhizobium etli cycHJKL gene locus involved in c-type cytochrome biogenesis: sequence analysis and characterization of two cycH mutants.
Gene,
208 (2),
215-219.
Artículo
53 - Yurgel,S.N., Soberon,M., Sharypova,L.A., Miranda,J., Morera,C., Simarov,B.V.. Isolation of Sinorhizobium meliloti Tn5 mutants with altered cytochrome terminal oxidase expression and improved symbiotic performance.
Fems Microbiology Letters,
165 (1),
167-173.
Artículo
54 - Miranda-Rios,J., Morera,C., Taboada,H., Davalos,A., Encarnacion,S., Mora,J., Soberon,M.. Expression of thiamin biosynthetic genes (thiCOGE) and production of symbiotic terminal oxidase cbb3 in Rhizobium etli.
Journal of Bacteriology,
179 (22),
6887-6893.
Artículo
55 - Soberon,M., Lopez,O., Miranda,J., Tabche,M.L., Morera,C.. Genetic evidence for 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) as a negative effector of cytochrome terminal oxidase cbb3 production in Rhizobium etli.
Molecular and General Genetics,
254 (6),
665-673.
Artículo
56 - Miranda,J., Membrillo-Hernandez,J., Tabche,M.L., Soberon,M.. Rhizobium etli cytochrome mutants with derepressed expression of cytochrome terminal oxidases and enhanced symbiotic nitrogen accumulation.
Applied Microbiology and Biotechnology,
45 (1-2),
182-188.
Artículo
57 - Hernandez-Lucas,I., Pardo,M.A., Segovia,L., Miranda,J., Martinez-Romero,E.. Rhizobium tropici chromosomal citrate synthase gene.
Applied and Environmental Microbiology,
61 (11),
3992-3997.
*
Artículo
58 - Navarro,Y., Miranda,J., Soberon,M.. CYTOCHROME EXPRESSION IN 2 STRAINS OF BRADYRHIZOBIUM SPECIES.
Asia-Pacific Journal Of Molecular Biology And Biotechnology,
3 (4),
327-331.
59 - Miranda Rios, Juan. Genetica molecular de genes involucrados en la expresion de oxidasas terminales en Rhizobium etli .
Instituto de Biotecnologia,
Doctorado en Biotecnologia,
UNAM.
Asesor: Coavrrubias Robles, Alejandra
Artículo
60 - Padilla,J.E., Miranda,J., Sanchez,F.. NODULIN REGULATION IN COMMON BEAN NODULES INDUCED BY BACTERIAL MUTANTS.
Molecular Plant-Microbe Interactions,
4 (5),
433-439.
*
61 - Miranda Rios, Juan. Aislamiento de nodulinas tempranas de frijol (Phaseolus vulgaris).
Instituto de Biotecnologia,
Maestria en Investigacion Biomedica,
UNAM.
Asesor: Coavrrubias Robles, Alejandra
Artículo
62 - Miranda-Rios,J., Sanchez-Pescador,R., Urdea,M., Covarrubias,A.A.. The complete nucleotide sequence of the glnALG operon of Escherichia coli K12.
Nucleic Acids Research,
15 (6),
2757-2770.
*
63 - Miranda Rios, Juan. Estudios sobre la regulacion de la expresion del aperon GLNALG de escherichia coli .
CIFN,
Licenciatura en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Coavrrubias Robles, Alejandra
Artículo
64 - Garat,B., Miranda,J., Charli,J.L., Joseph-Bravo,P.. Presence of a membrane bound pyroglutamyl amino peptidase degrading thyrotropin releasing hormone in rat brain.
Neuropeptides,
6 (1),
27-40.