Dr. Karel Johan Estrada Guerra
Técnico Académico

Nivel D del PRIDE
  • Doctorado, Doctor en Ciencias, Universidad Autónoma del Estado de Morelos, 2024

  • Maestría, Maestría en Ciencias, Universidad Autónoma del Estado de Morelos, 2018

  • Licenciatura, Licenciatura en Matemáticas, 2003

Total de publicaciones: 29
  • Tipo
  • Fecha
Open Access Artículo
2 - Santamaria,R.M., Estrada,K., Lopez,M.E., Rojas,E., Martinez,G., Alcala,Y., Rojas,C., Alvarez,J.A., Lira,J.J., Santamaria,T.V., Sanchez-Flores,A., Figueroa,J.V. (2024). Comparative Transcriptome Analysis of Babesia bigemina Attenuated Vaccine and Virulent Strains of Mexican Origin. Vaccines (Basel), 12 (3), 309.
Open Access Artículo
3 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B. (2023). Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology, 8 (5), 845?859.
Open Access Artículo
4 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P. (2022). The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology, 12, 876839.
Artículo
5 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I (2022). Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research, 53 (4), 407-415.
Open Access Artículo
6 - Santana,F.L., Estrada,K., Alford,M.A., Wu,B.C., Dostert,M., Pedraz,L., Akhoundsadegh,N., Kalsi,P., Haney,E.F., Straus,S.K., Corzo,G., Hancock,R.E.W. (2022). Novel Alligator Cathelicidin As-CATH8 Demonstrates Anti-Infective Activity against Clinically Relevant and Crocodylian Bacterial Pathogens. Antibiotics (Basel), 11 (11), 1603.
Artículo
7 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C. (2021). Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, 105 (9).
Open Access Artículo
10 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S. (2020). Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
Open Access Artículo
12 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
13 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S. (2019). De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
Open Access Artículo
15 - Adalid-Peralta, L., Rosas, G., Arce-Sillas, A., Bobes, R.J., Cardenas, G., Hernandez, M., Trejo, C., Meneses, G., Hernandez, B., Estrada, K., Fleury, A., Laclette, J.P., Larralde, C., Sciutto, E., Fragoso, G. (2017). Effect of Transforming Growth Factor-beta upon Taenia solium and Taenia crassiceps Cysticerci. Scientific Reports, 7 (1), 12345.
Artículo
16 - Bobes, R.J., Navarrete-Perea, J., Ochoa-Leyva, A., Anaya, V.H., Hernandez, M., Cervantes-Torres, J., Estrada, K., Sanchez-Lopez, F., Soberon, X., Rosas, G., Maroni-Nunes C., Garcia-Varela, M., Sotelo-Mundo, R.R., Lopez-Zavala, A.A., Gevorkian, G., Acero, G., Laclette, J.P., Fragoso, G., Sciutto, E. (2017). Experimental and theoretical approaches to investigate the immunogenicity of Taenia solium-derived KE7 antigen. Infection and Immunity, 85, e00395-17.
Open Access Artículo
Open Access Artículo
18 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A. (2016). Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
20 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D. (2015). Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Artículo
21 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E. (2014). High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Revisión
22 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A. (2014). GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Artículo
23 - Diaz-Masmela,Y., Fragoso,G., Ambrosio,J.R., Mendoza-Hernandez,G., Rosas,G., Estrada,K., Carrero,J.C., Sciutto,E., Laclette,J.P., Bobes,R.J. (2013). Immunodiagnosis of porcine cysticercosis: Identification of candidate antigens through immunoproteomics. Veterinary Journal, 198 (3), 656-660.
Artículo
24 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A. (2013). The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Preprint
25 - Singh,P., Vydyam,P., Fang,T., Kumar,M., Estrada,K., Grande,R., Sanchez-Flores,A., Gonzalez,L.M., Montero,E., Chakravarty,S., Lonardi,S., Berry,V,, Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Le Roch,K.G., Harb,O.S., Ben Mamoun,C. (2024). Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence. bioRxiv, Preprint posted January 18.
Open Access Preprint
26 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C. (2022). Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa. bioRxiv, Preprint posted May 09.
Open Access Divulgación
27 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
28 - Estrada Guerra, Karel Johan (2024). Análisis in silico de las secuencias de unión a ribosoma que definen el inicio de la traducción en procariontes. Instituto de Investigacion en Ciencias Basicas y Aplicadas, Doctorado en Ciencias, UAEM. *
Open Access Artículo
Open Access Artículo
31 - Santamaria,R.M., Estrada,K., Lopez,M.E., Rojas,E., Martinez,G., Alcala,Y., Rojas,C., Alvarez,J.A., Lira,J.J., Santamaria,T.V., Sanchez-Flores,A., Figueroa,J.V.. Comparative Transcriptome Analysis of Babesia bigemina Attenuated Vaccine and Virulent Strains of Mexican Origin. Vaccines (Basel), 12 (3), 309.
Preprint
32 - Singh,P., Vydyam,P., Fang,T., Kumar,M., Estrada,K., Grande,R., Sanchez-Flores,A., Gonzalez,L.M., Montero,E., Chakravarty,S., Lonardi,S., Berry,V,, Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Le Roch,K.G., Harb,O.S., Ben Mamoun,C.. Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence. bioRxiv, Preprint posted January 18.
33 - Estrada Guerra, Karel Johan. Análisis in silico de las secuencias de unión a ribosoma que definen el inicio de la traducción en procariontes. Instituto de Investigacion en Ciencias Basicas y Aplicadas, Doctorado en Ciencias, UAEM. *
Open Access Artículo
34 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B.. Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology, 8 (5), 845?859.
Open Access Artículo
35 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P.. The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology, 12, 876839.
Artículo
36 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I. Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research, 53 (4), 407-415.
Open Access Artículo
37 - Santana,F.L., Estrada,K., Alford,M.A., Wu,B.C., Dostert,M., Pedraz,L., Akhoundsadegh,N., Kalsi,P., Haney,E.F., Straus,S.K., Corzo,G., Hancock,R.E.W.. Novel Alligator Cathelicidin As-CATH8 Demonstrates Anti-Infective Activity against Clinically Relevant and Crocodylian Bacterial Pathogens. Antibiotics (Basel), 11 (11), 1603.
Open Access Preprint
38 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C.. Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa. bioRxiv, Preprint posted May 09.
Open Access Artículo
44 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
45 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S.. De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
Open Access Artículo
47 - Adalid-Peralta, L., Rosas, G., Arce-Sillas, A., Bobes, R.J., Cardenas, G., Hernandez, M., Trejo, C., Meneses, G., Hernandez, B., Estrada, K., Fleury, A., Laclette, J.P., Larralde, C., Sciutto, E., Fragoso, G.. Effect of Transforming Growth Factor-beta upon Taenia solium and Taenia crassiceps Cysticerci. Scientific Reports, 7 (1), 12345.
Artículo
48 - Bobes, R.J., Navarrete-Perea, J., Ochoa-Leyva, A., Anaya, V.H., Hernandez, M., Cervantes-Torres, J., Estrada, K., Sanchez-Lopez, F., Soberon, X., Rosas, G., Maroni-Nunes C., Garcia-Varela, M., Sotelo-Mundo, R.R., Lopez-Zavala, A.A., Gevorkian, G., Acero, G., Laclette, J.P., Fragoso, G., Sciutto, E.. Experimental and theoretical approaches to investigate the immunogenicity of Taenia solium-derived KE7 antigen. Infection and Immunity, 85, e00395-17.
Open Access Divulgación
49 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
Open Access Artículo
Open Access Artículo
52 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A.. Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
55 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E.. High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Revisión
56 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A.. GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Artículo
57 - Diaz-Masmela,Y., Fragoso,G., Ambrosio,J.R., Mendoza-Hernandez,G., Rosas,G., Estrada,K., Carrero,J.C., Sciutto,E., Laclette,J.P., Bobes,R.J.. Immunodiagnosis of porcine cysticercosis: Identification of candidate antigens through immunoproteomics. Veterinary Journal, 198 (3), 656-660.
Artículo
58 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A.. The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.

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