Dr. Cuauhtémoc Licona Cassani
Investigador Titular A Tiempo Completo
Análisis de diversidad genética, metabólica y microbiana de ambientes con aplicaciones biotecnológicas
Biología sintética
Bioprospección y descubrimiento de productos naturales en actinomicetos
Desarrollo de biosensores
Ingeniería metabólica
Doctorado, Dr. en Filosofía
- Activos
-
Estancia Temporal
* Indica publicación con otra institución de adscripción
Total de publicaciones: 75
- Tipo
- Fecha
Artículo
1 - Corona-Cervantes,K., Urrutia-Baca,V.H., Gamez-Valdez,J.S., Jimenez-Lopez,B., Rodriguez-Gutierrez,N.A., Chavez-Caraza,K., Espiricueta-Candelaria,F., Salas-Villalobos,U.A., Ramos-Parra,P.A., Gutierrez-Uribe,J.A., Brunck,M., Chuck-Hernandez,C., Licona-Cassani,C. (2026). Maternal obesity alters human milk oligosaccharides content and correlates with early acquisition of late colonizers in the neonatal gut microbiome.
Gut Microbes,
18 (1),
2607043.
Artículo
2 - Hernandez-Rodriguez,D., Contreras,A., Melgar-Lalanne,G., Lara Arellano,S.S., Meza,J.E., Licona-Cassani,C., Viveros,R. (2026). Fecal microbiota composition concerning body mass index and early-life factors in Mexican preschool-aged children: a cross-sectional study.
PeerJ,
14,
e21253.
Revisión
3 - Perez-Morales,G., Merino,E., Cevallos,M.A., Gosset,G., Licona-Cassani,C., Caspeta,L., Martinez,A. (2026). Toward a systems metabolic engineering approach to improve thermotolerance of Escherichia coli.
Microbial Cell Factories,
25,
108.
Artículo
4 - Puy-Alquiza,M.J, Noriega-Luna,B., Rodriguez-Orduna,L., Licona-Cassani,C., Miranda-Aviles,R., Miranda-Puy,M.Y., Baez-Espinosa,J.R., Moncada-Sanchez,C.D. (2026). Isolation, Genomic Characterization and Biotechnological Potential of Culturable Bacteria from Metal-Rich and Organic Soils of La Soledad Dam, Guanajuato, Mexico.
Geomicrobiology Journal,
43 (8),
1022-1041.
*
Revisión in press
5 - Trejo-Alarcon,L.M., Tierrafria,V.H., Salazar-Garcia,L.M., Gonzalez-Salazar,L.A., Gonzalez-Aquino,J.C., Martinez,A., Licona-Cassani,C. (2026). Translating biosynthetic gene cluster architecture into biosensor design for microbial natural product discovery.
Essays in Biochemistry, Jun 3 [Online ahead of print],
EBC20250015.
Artículo
6 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,W.I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N. (2026). Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey.
ISME Communications,
6 (1),
ycag063.
*
Artículo
7 - Alvarado-Pena,N., Munoz-Torrico,M., Narvaez-Diaz,L., Mejia-Ponce,P.M, Becerril-Vargas,E., Zuniga,J., Muniz-Salazar,R., Laniado-Laborin,R., Licona-Cassani,C., Soberon,X., Silva-Herzog,E. (2025). Mycobacterium tuberculosis genomic surveillance in Mexico. Characterization of variants in drug resistance and efflux pump genes.
Frontiers in Microbiology,
16,
1666838.
Artículo
8 - Chimal-Munoz,M., Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Mejia-Ponce,P.M., Licona-Cassani,C., Muniz-Salazar,R., Montero,H., Zenteno-Cuevas,R. (2025). Whole-Genome Sequence Analysis to Assess Mutations in Efflux Pumps in Mycobacterium tuberculosis: The Influence in Drug Resistance.
Microorganisms,
13 (6),
1306.
*
Artículo
9 - Elakkya,M., Gonzalez-Salazar,L.A., Lopez-Reyes,K., Rebelo-Romao,I., Sousa,A., Godde,V., Niehaus,K., Thenappan,D.P., Vilchez,J.I., Paul,S., Licona-Cassani,C. (2025). Comparative genomics and metabolomics reveal phytohormone production, nutrient acquisition, and osmotic stress tolerance in Azotobacter chroococcum W5.
Frontiers in Microbiology,
16,
1626016.
Artículo
10 - Gallardo-Camarena,M.V., Reverchon,F., Mendez-Bravo,A., Torres-Acosta,M.A., Licona-Cassani,C. (2025). Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.
AMB Express,
15 (1).
*
Artículo
11 - Gallardo-Camarena,M.V., Torres-Acosta,M.A., Licona-Cassani,C. (2025). Economic evaluation of large-scale production for Colletotrichum antagonists as biocontrol agents against anthracnose.
Journal of Chemical Technology and Biotechnology,
100 (5),
1117-1128.
*
Artículo
12 - Gamez-Valdez,J.S., Corona-Cervantes,K., Sanchez-Salguero,E.S., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Carballo-Castaneda,R.A., Moreno-Ulloa,A., Lara-Diaz,V.J., Brunck,M.E.G., Licona-Cassani,C. (2025). Analysis of human colostrum reveals differential co-occurrence networks of metabolites, microbiota and cytokines in maternal obesity.
Food & Function,
16 (14),
5900-5916.
*
Artículo
13 - Morey-Leon,G., Mejia-Ponce,P.M., Fernandez-Cadena,J.C, Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Fresia,P, Berna,L (2025). Global epidemiology of Mycobacterium tuberculosis lineage 4 insights from Ecuadorian genomic data.
Scientific Reports,
15 (1).
*
Artículo
14 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Gonzalez-Valdez,J., Aguilar,O., Renard,C.M.G.C., Licona-Cassani,C. (2025). Influence of molar ratio and pH on physicochemical characteristics of genipin-derived pigments formed at cold and mild temperatures.
Food Chemistry Advances,
7,
100983.
*
Artículo
15 - Ramos-Garcia,A.A., Mejia-Ponce,P.M., Salem-Mojica,N., Santos-Diaz,A., Martinez-Ledesma,E., Licona-Cassani,C. (2025). FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in Mycobacterium tuberculosis.
Bioinformatics,
41 (7),
btaf341.
Artículo
16 - Rodriguez-Orduna,L., Aguilar,C., Hernandez-Melgar,A.G., Arocha-Garza,H.F., Verdel-Aranda,K., Vazquez-Rodriguez,A., Lopez-Ribot,J.L., Moreno-Ulloa,A., Licona-Cassani,C. (2025). Biodiscovery of Actinomycetota through metabolo-genomics reveals functional diversity across contrasting Mexican ecosystems.
Microbial Genomics,
11 (10),
001557 [corrigendum vol 12 (2)].
Artículo
17 - Salazar-Garcia,L.M., Damas-Ramos,L.C., Trejo-Alarcon,L.M., Rago,D., Ahonen,L., Cruz-Morales,P., Ponce-Noyola,P., Licona-Cassani,C. (2025). CRISPR-driven enhanced hydrocarbon emulsification in an environmental Pseudomonas aeruginosa strain.
Microbial Cell Factories,
24 (1),
151.
Artículo
18 - Trejo-Alarcon,L.M., Cano-Prieto,C., Calheiros de Carvalho,A., Rago,D., Ahonen,L., Cruz-Morales,P., Licona-Cassani,C. (2025). Integrative metabolo-genomics suggests a biosynthetic pathway for tetrangulol in Streptomyces sp. KL110A.
World Journal of Microbiology & Biotechnology,
41 (3).
*
Artículo
19 - Trejo-Alarcon,L.M., Cruz-Morales,P., Licona-Cassani,C. (2025). Draft genome sequence of Streptomyces sp. CC302I with non-canonical biosynthetic gene clusters for codon-readthrough activity.
Microbiology Resource Announcements,
14 (2).
*
Artículo
20 - Zdouc,M.M., Blin,K., Louwen,N.L.L., Navarro,J., Loureiro,C., Bader,C.D., Bailey,C.B., Barra,L., Booth,T.J., Bozhuyuk,K.A.J., Cediel-Becerra,J.D.D., Charlop-Powers,Z., Chevrette,M.G., Chooi,Y.H., D'Agostino,P.M., de Rond T., Del Pup E., Duncan,K.R., Gu,W., Hanif,N., Helfrich,E.J.N., Jenner,M., Katsuyama,Y., Korenskaia,A., Krug,D., Libis,V., Lund,G.A., Mantri,S., Morgan,K.D., Owen,C., Phan,C.S., Philmus,B., Reitz,Z.L., Robinson,S.L., Singh,K.S., Teufel,R., Tong,Y., Tugizimana,F., Ulanova,D., Winter,J.M., Aguilar,C., Akiyama,D.Y., Al-Salihi,S.A.A., Alanjary,M., Alberti,F., Aleti,G., Alharthi,S.A., Rojo,M.Y.A., Arishi,A.A., Augustijn,H.E., Avalon,N.E., Avelar-Rivas,J.A., Axt,K.K., Barbieri,H.B., Barbosa,J.C.J., Barboza Segato,L.G., Barrett,S.E., Baunach,M., Beemelmanns,C., Beqaj,D., Berger,T., Bernaldo-Aguero,J., Bettenbuhl,S.M., Bielinski,V.A., Biermann,F., Borges,R.M., Borriss,R., Breitenbach,M., Bretscher,K.M., Brigham,M.W., Buedenbender,L., Bulcock,B.W., Cano-Prieto,C., Capela,J., Carrion,V.J., Carter,R.S., Castelo-Branco,R., Castro-Falcon,G., Chagas,F.O., Charria-Giron,E., Chaudhri,A.A., Chaudhry,V., Choi,H., Choi,Y., Choupannejad,R., Chromy,J., Donahey,M.S.C., Collemare,J., Connolly,J.A., Creamer,K.E., Crusemann,M., Cruz,A.A., Cumsille,A., Dallery,J.F., Damas-Ramos,L.C., Damiani,T., de Kruijff M., Martin,B.D., Sala,G.D., Dillen,J., Doering,D.T., Dommaraju,S.R., Durusu,S., Egbert,S., Ellerhorst,M., Faussurier,B., Fetter,A., Feuermann,M., Fewer,D.P., Foldi,J., Frediansyah,A., Garza,E.A., Gavriilidou,A., Gentile,A., Gerke,J., Gerstmans,H., Gomez-Escribano,J.P., Gonzalez-Salazar,L.A., Grayson,N.E., Greco,C., Gomez,J.E.G., Guerra,S., Flores,S.G., Gurevich,A., Gutierrez-Garcia,K., Hart,L., Haslinger,K., He,B., Hebra,T., Hemmann,J.L., Hindra,H., Hoing,L., Holland,D.C., Holme,J.E., Horch,T., Hrab,P., Hu,J., Huynh,T.H., Hwang,J.Y., Iacovelli,R., Iftime,D., Iorio,M., Jayachandran,S., Jeong,E., Jing,J., Jung,J.J., Kakumu,Y., Kalkreuter,E., Kang,K.B., Kang,S., Kim,W., Kim,G.J., Kim,H., Kim,H.U., Klapper,M., Koetsier,R.A., Kollten,C., Kovacs,A.T., Kriukova,Y., Kubach,N., Kunjapur,A.M., Kushnareva,A.K., Kust,A., Lamber,J., Larralde,M., Larsen,N.J., Launay,A.P., Le,N.T., Lebeer,S., Lee,B.T., Lee,K., Lev,K.L., Li,S.M., Li,Y.X., Licona-Cassani,C., Lien,A., Liu,J., Lopez,J.A.V., Machushynets,N.V., Macias,M.I., Mahmud,T., Maleckis,M., Martinez-Martinez,A.M., Mast,Y., Maximo,M.F., McBride,C.M., McLellan,R.M., Bhatt,K.M., Melkonian,C., Merrild,A., Metsa-Ketela,M., Mitchell,D.A., Muller,A.V., Nguyen,G.S., Nguyen,H.T., Niedermeyer,T.H.J., O'Hare,J.H., Ossowicki,A., Ostash,B.O., Otani,H., Padva,L., Paliyal,S., Pan,X., Panghal,M., Parade,D.S., Park,J., Parra,J., Rubio,M.P., Pham,H.T., Pidot,S.J., Piel,J., Pourmohsenin,B., Rakhmanov,M., Ramesh,S., Rasmussen,M.H., Rego,A., Reher,R., Rice,A.J., Rigolet,A., Romero-Otero,A., Rosas-Becerra,L.R., Rosiles,P.Y., Rutz,A., Ryu,B., Sahadeo,L.A., Saldanha,M., Salvi,L., Sanchez-Carvajal,E., Santos-Medellin,C., Sbaraini,N., Schoellhorn,S.M., Schumm,C., Sehnal,L., Selem,N., Shah,A.D., Shishido,T.K., Sieber,S., Silviani,V., Singh,G., Singh,H., Sokolova,N., Sonnenschein,E.C., Sosio,M., Sowa,S.T., Steffen,K., Stegmann,E., Streiff,A.B., Struder,A., Surup,F., Svenningsen,T., Sweeney,D., Szenei,J., Tagirdzhanov,A., Tan,B., Tarnowski,M.J. (2025). MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Nucleic Acids Research,
53 (D1),
gkae1115,
D678-D690.
Artículo
21 - Aguilar,C., Alwali,A., Mair,M., Rodriguez-Orduna,L., Contreras-Peruyero,H., Modi,R., Roberts,C., Selem-Mojica,N., Licona-Cassani,C., Parkinson,E.I. (2024). Actinomycetota bioprospecting from ore-forming environments.
Microbial Genomics,
10 (5),
001253.
*
Artículo
22 - Alwali,A.Y., Santos,D., Aguilar,C., Birch,A., Rodriguez-Ordunea,L., Roberts,C.B., Modi,R., Licona-Cassani,C., Parkinson,E.I. (2024). Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin.
Journal of Industrial Microbiology & Biotechnology,
51,
kuae014.
*
Artículo
23 - Bermudez-Hernandez,G.A., Perez-Martinez,D., Ortiz-Leon,M.C., Muniz-Salazar,R., Licona-Cassani,C., Zenteno-Cuevas,R. (2024). Mutational Dynamics Related to Antibiotic Resistance in M. tuberculosis Isolates from Serial Samples of Patients with Tuberculosis and Type 2 Diabetes Mellitus.
Microorganisms,
12 (2).
*
Artículo
24 - Contreras-Peruyero,H., Guerrero-Flores,S., Zirion-Martinez,C., Mejia-Ponce,P.M., Navarro-Miranda,M., Lovaco-Flores,J.A., Ibarra-Rodriguez,J.M., Pashkov,A., Licona-Cassani,C., Selem-Mojica,N. (2024). Meeting the challenge of genomic analysis: a collaboratively developed workshop for pangenomics and topological data analysis.
Bioinformatics Advances,
4 (1).
*
Artículo
25 - Deantas-Jahn,C., Mendoza,S.N., Licona-Cassani,C., Orellana,C., Saa,P.A. (2024). Metabolic modeling of Halomonas campaniensis improves polyhydroxybutyrate production under nitrogen limitation.
Applied Microbiology and Biotechnology,
108 (1),
310.
*
Artículo
26 - Lozano-Aguirre,L., Avitia,M., Lappe-Oliveras,P., Licona-Cassani,C., Cevallos,M.A., Le Borgne,S. (2024). Draft genomes of four Kluyveromyces marxianus isolates retrieved from the elaboration process of henequen (Agave fourcroydes) mezcal.
Microbiology Resource Announcements,
13 (3).
*
Artículo
27 - Mejia-Ponce,P.M., Chimal-Munoz,M., Zenteno-Cuevas,R., Licona-Cassani,C. (2024). Draft genome sequences of 12 Mycolicibacterium fortuitum isolates from human pulmonary infections in Veracruz, Mexico.
Microbiology Resource Announcements,
13 (4).
*
Artículo
28 - Rodriguez-Orduna,L., Lara-Diaz,V.J., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Licona-Cassani,C. (2024). Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.
Microbiology Resource Announcements,
13 (9).
*
Artículo
29 - Zuffa,S., Schmid,R., Bauermeister,A., Gomes,P., Caraballo-Rodriguez,A.M., El Abiead,Y., Aron,A.T., Gentry,E.C., Zemlin,J., Meehan,M.J., Avalon,N.E., Cichewicz,R.H., Buzun,E., Terrazas,M.C., Hsu,C.Y., Oles,R., Ayala,A.V., Zhao,J., Chu,H., Kuijpers,M.C.M., Jackrel,S.L., Tugizimana,F., Nephali,L.P., Dubery,I.A., Madala,N.E., Moreira,E.A., Costa-Lotufo,L.V., Lopes,N.P., Rezende-Teixeira,P., Jimenez,P.C., Rimal,B., Patterson,A.D., Traxler,M.F., Pessotti,R.D.C., varado-Villalobos,D., Tamayo-Castillo,G., Chaverri,P., Escudero-Leyva,E., Quiros-Guerrero,L.M., Bory,A.J., Joubert,J., Rutz,A., Wolfender,J.L., Allard,P.M., Sichert,A., Pontrelli,S., Pullman,B.S., Bandeira,N., Gerwick,W.H., Gindro,K., Massana-Codina,J., Wagner,B.C., Forchhammer,K., Petras,D., Aiosa,N., Garg,N., Liebeke,M., Bourceau,P., Kang,K.B., Gadhavi,H., de Carvalho,L.P.S., Silva dos Santos,M., Perez-Lorente,A.I., Molina-Santiago,C., Romero,D., Franke,R., Bronstrup,M., Vera Ponce de Leon,A., Pope,P.B., La Rosa,S.L., La Barbera,G., Roager,H.M., Laursen,M.F., Hammerle,F., Siewert,B., Peintner,U., Licona-Cassani,C., Rodriguez-Orduna,L., Rampler,E., Hildebrand,F., Koellensperger,G., Schoeny,H., Hohenwallner,K., Panzenboeck,L., Gregor,R., O'Neill,E.C., Roxborough,E.T., Odoi,J., Bale,N.J., Ding,S., Sinninghe Damste,J.S., Guan,X.L., Cui,J.J., Ju,K.S., Silva,D.B., Silva,F.M.R., da Silva,G.F., Koolen,H.H.F., Grundmann,C., Clement,J.A., Mohimani,H., Broders,K., McPhail,K.L., Ober-Singleton,S.E., Rath,C.M., McDonald,D., Knight,R., Wang,M., Dorrestein,P.C. (2024). microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nature Microbiology,
9 (2),
336-345.
*
Artículo
30 - Gonzalez-Salazar,L.A., Quezada,M., Rodriguez-Orduna,L., Ramos-Aboites,H., Capon,R.J., Souza-Saldivar,V., Barona-Gomez,F., Licona-Cassani,C. (2023). Biosynthetic novelty index reveals the metabolic potential of rare actinobacteria isolated from highly oligotrophic sediments.
Microbial Genomics,
9 (1).
*
Artículo
31 - Mejia-Ponce,P.M., Ramos-Gonzalez,E.J., Ramos-Garcia,A.A., Lara-Ramirez,E.E., Soriano-Herrera,A.R., Medellin-Luna,M.F., Valdez-Salazar,F., Castro-Garay,C.Y., Nunez-Contreras,J.J., De Donato-Capote,M., Sharma,A., Castaneda-Delgado,J.E., Zenteno-Cuevas,R., Enciso-Moreno,J.A., Licona-Cassani,C. (2023). Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
PLoS ONE,
18 (10 October).
*
Artículo
32 - Morey-Leon,G., Mejia-Ponce,P.M., Granda Pardo,J.C., Munoz-Mawyin,K., Fernandez-Cadena,J.C., Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Berna,L. (2023). A precision overview of genomic resistance screening in Ecuadorian isolates of Mycobacterium tuberculosis using web-based bioinformatics tools.
PLoS ONE,
18 (12 December).
*
Artículo nacional
33 - Perez-Cabeza de Vaca,R., Cortes-Espinosa,T., Maldonado-Arriaga,B., Suarez-Cuenca,J.A., Sandoval-Jimenez,S., Mondragon-Teran,P., Navarro-Gerrard,C., Paredes-Amenabar,C., Corazon-Trujillo de la Fuente,K., Romero-Lozania,J.A., Lopez-Gomez,J.G., Licona-Cassani,C. (2023). Vedolizumab como terapia primaria en colitis ulcerosa y en la enfermedad de Crohn de moderada a grave: revisión y metaanálisis.
Revista mexicana de enfermedades inflamatorias inmunomediadas,
95 (2),
31-39.
*
Artículo
34 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Renard,C.M.G.C., Contreras-Esquivel,J.C., Rodriguez-Rodriguez,J., Aguilar,O., Gonzalez-Valdez,J., Licona-Cassani,C. (2023). Physical characterization of genipin complexes coupled with multivariate data analysis to assess formed pigments.
Colloids and Surfaces A: Physicochemical and Engineering Aspects,
673,
131774.
*
Artículo
35 - Rodriguez-Sanchez,A.C., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Cumsille,A., Undabarrena,A., Camara,B., Selem-Mojica,N., Licona-Cassani,C. (2023). Phylogenetic classification of natural product biosynthetic gene clusters based on regulatory mechanisms.
Frontiers in Microbiology,
14.
*
Artículo
36 - Urrutia-Baca,V.H., Chuck-Hernandez,C., Gutierrez-Uribe,J., Ramos-Parra,P.A., Licona-Cassani,C. (2023). Development and validation of a versatile analytical method for absolute quantification of seven oligosaccharides in human, bovine, and goat milk.
Heliyon,
9 (11).
*
Artículo
37 - Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Madrazo-Moya,C.F., Cancino-Munoz,I., Montero,H., Licona-Cassani,C., Muniz-Salazar,R., Comas,I., Zenteno-Cuevas,R. (2022). SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance.
Genes,
13 (4).
*
Artículo
38 - Pineiro-Salvador,R., Vazquez-Garza,E., Cruz-Cardenas,J.A., Licona-Cassani,C., Garcia-Rivas,G., Moreno-Vasquez,J., Alcorta-Garcia,M.R., Lara-Diaz,V.J., Brunck,M.E.G. (2022). A cross-sectional study evidences regulations of leukocytes in the colostrum of mothers with obesity.
BMC Medicine,
20 (1).
*
Artículo
39 - Thenappan,D.P., Gonzalez-Salazar,L.A., Licona-Cassani,C., Kannepalli,A. (2022). Draft Genome Sequence of Streptomyces sp. Strain FB2, Isolated from Rice Rhizosphere.
Microbiology Resource Announcements,
11 (6).
*
Artículo
40 - Enriquez-Ochoa,D., Melendez-Martinez,D., Aguilar-Yanez,J.M., Licona-Cassani,C., Mayolo-Deloisa,K. (2021). Development of aqueous two-phase systems-based approaches for the selective recovery of metalloproteases and phospholipases A2 toxins from Crotalus molossus nigrescens venom.
Bioresources and Bioprocessing,
8 (1).
*
Artículo
41 - Flores-Gatica,M., Castaneda-Aponte,H., Gil-Garzon,M.R., Mora-Galvez,L.M., Banda-Magana,M.P., Jauregui-Jauregui,J.A., Torres-Acosta,M.A., Mayolo-Deloisa,K., Licona-Cassani,C. (2021). Primary recovery of hyaluronic acid produced in Streptococcus equi subsp. zooepidemicus using PEG?_"citrate aqueous two-phase systems.
AMB Express,
11 (1),
123.
*
Artículo
42 - Gamez-Valdez,J.S., Garcia-Mazcorro,J.F., Montoya-Rincon,A.H., Rodriguez-Reyes,D.L., Jimenez-Blanco,G., Alanis-Rodriguez,M.T., Perez-Cabeza de Vaca,R., Alcorta-Garcia,M.R., Brunck,M., Lara-Diaz,V.J., Licona-Cassani,C. (2021). Differential analysis of the bacterial community in colostrum samples from women with gestational diabetes mellitus and obesity.
Scientific Reports,
11 (1).
*
Artículo
43 - Jimenez-Ruano,A.C., Madrazo-Moya,C.F., Cancino-Munoz,I., Mejia-Ponce,P.M., Licona-Cassani,C., Comas,I., Muniz-Salazar,R., Zenteno-Cuevas,R. (2021). Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance.
Scientific Reports,
11 (1),
1870.
*
Artículo
44 - Maldonado-Arriaga,B., Sandoval-Jimenez,S., Rodriguez-Silverio,J., Alcaraz-Estrada,S.L., Cortes-Espinosa,T., Perez-Cabeza de Vaca,R., Licona-Cassani,C., Gomez-Valdez,J.S., Shaw,J., Mondragon-Teran,P., Hernandez-Cortez,C., Suarez-Cuenca,J.A., Castro-Escarpulli,G. (2021). Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis.
Microbiologyopen,
10 (2).
*
Artículo
45 - Torres-Acosta,M.A., Castaneda-Aponte,H.M., Mora-Galvez,L.M., Gil-Garzon,M.R., Banda-Magana,M.P., Marcellin,E., Mayolo-Deloisa,K., Licona-Cassani,C. (2021). Comparative Economic Analysis Between Endogenous and Recombinant Production of Hyaluronic Acid.
Frontiers in Bioengineering and Biotechnology,
9.
*
Revisión
46 - Avila-Rodriguez,M.I., Melendez-Martinez,D., Licona-Cassani,C., Aguilar-Yanez,J.M., Benavides,J., Sanchez,M.L. (2020). Practical context of enzymatic treatment for wound healing: A secreted protease approach (review).
Biomedical Reports,
13 (1),
3-14.
*
Artículo
47 - Gallegos-Lopez,S., Mejia-Ponce,P.M., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Souza-Saldivar,V., Licona-Cassani,C. (2020). Draft Genome Sequence of Streptomyces sp. Strain C8S0, isolated from a highly oligotrophic sediment.
Microbiology Resource Announcements,
9 (14).
*
Artículo
48 - Garcia-Mazcorro,J.F., Kawas,J.R., Licona-Cassani,C., Mertens-Talcott,S., Noratto,G. (2020). Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity.
PeerJ,
8.
*
Artículo
49 - Garza-Aguilar,S.M., Garcia-Salinas,C., Mejia-Ponce,P.M, Licona-Cassani,C, Ramos-Parra,P.A, Diaz de la Garza,R.I. (2020). The complexity of folate polyglutamylation in plants: Postharvest ripening and ethylene modulate polyglutamylated profiles in climacteric fruits plus systematic analysis of the glutamyl tail-editing enzymes.
Scientia Horticulturae,
273 (109588).
*
Artículo
50 - Melendez-Martinez,D., Plenge-Tellechea,L.F., Gatica-Colima,A., Cruz-Perez,M.S., Aguilar-Yanez,J.M., Licona-Cassani,C. (2020). Functional mining of the crotalus spp. venom protease repertoire reveals potential for chronic wound therapeutics.
Molecules,
25 (15).
*
Artículo
51 - Orellana,C.A., Zaragoza,N.E., Licona-Cassani,C., Palfreyman,R.W., Cowie,N., Moonen,G., Moutafis,G., Power,J., Nielsen,L.K., Marcellin,E. (2020). Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani.
Journal of Industrial Microbiology & Biotechnology,
47 (12),
1059-1073.
*
Artículo
52 - Khalil,Z.G., Cruz-Morales,P., Licona-Cassani,C., Marcellin,E., Capon,R.J. (2019). Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.
ISME Journal,
13 (1),
147-158.
*
Artículo
53 - Cruz-Morales,P., Ramos-Aboites,H.E., Licona-Cassani,C., Selem-Mojica,N., Mejia-Ponce,P.M., Souza-Saldivar,V., Barona-Gomez,F. (2017). Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.
FEMS Microbiology Ecology,
93 (9).
*
Artículo
54 - Quezada,M., Licona-Cassani,C., Cruz-Morales,P., Salim,A.A., Marcellin,E., Capon,R.J., Barona-Gomez,F. (2017). Diverse cone-snail species harbor closely related Streptomyces species with conserved chemical and genetic profiles, including polycyclic tetramic acid macrolactams.
Frontiers in Microbiology,
8 (NOV).
*
Artículo
55 - Steffani-Vallejo,J.L., Zuniga,C., Cruz-Morales,P., Lozano,L., Morales,M., Licona-Cassani,C., Revah,S., Utrilla,J. (2017). Draft genome sequence of sphingobacterium sp. CZ-UAM, isolated from a methanotrophic consortium.
Genome Announcements,
5 (33).
*
Artículo
56 - Licona-Cassani,C., Steen,J.A., Zaragoza,N.E., Moonen,G., Moutafis,G., Hodson,M.P., Power,J., Nielsen,L.K., Marcellin,E. (2016). Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.
Anaerobe,
41,
113-124.
*
Artículo
57 - Marcellin,E., Behrendorff,J.B., Nagaraju,S., Detissera,S., Segovia,S., Palfreyman,R.W., Daniell,J., Licona-Cassani,C., Quek,L.E., Speight,R., Hodson,M.P., Simpson,S.D., Mitchell,W.P., Kopke,M., Nielsen,L.K. (2016). Low carbon fuels and commodity chemicals from waste gases-systematic approach to understand energy metabolism in a model acetogen.
Green Chemistry,
18 (10),
3020-3028.
*
Artículo
58 - Tierrafria,V.H., Licona-Cassani,C., Maldonado-Carmona,N., Romero-Rodriguez,A., Centeno-Leija,S., Marcellin,E., Rodriguez-Sanoja,R., Ruiz-Villafan,B., Nielsen,L.K., Sanchez,S. (2016). Deletion of the hypothetical protein SCO2127 of Streptomyces coelicolor allowed identification of a new regulator of actinorhodin production.
Applied Microbiology and Biotechnology,
100 (21),
9229-9237 [Correction 104 (8) 3687].
*
Revisión
59 - Licona-Cassani,C., Cruz-Morales,P., Manteca,A., Barona-Gomez,F., Nielsen,L.K., Marcellin,E. (2015). Systems Biology Approaches to Understand Natural Products Biosynthesis.
Frontiers in Bioengineering and Biotechnology,
3.
*
Artículo
60 - Navone,L., Macagno,J.P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Gramajo,H., Rodriguez,E. (2015). AllR controls the expression of Streptomyces coelicolor allantoin pathway genes.
Applied and Environmental Microbiology,
81 (19),
6649-6659.
*
Artículo
61 - Liao,C., Rigali,S., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Ye,B.C. (2014). Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.
Microbiology (United Kingdom),
160 (9),
1914-1928.
*
Artículo
62 - Licona-Cassani,C., Lim,S., Marcellin,E., Nielsen,L.K. (2014). Temporal dynamics of the saccharopolyspora erythraea phosphoproteome.
Molecular and Cellular Proteomics,
13 (5),
1219-1230.
*
Artículo
63 - Licona-Cassani,C., Lara,A.R., Cabrera-Valladares,N., Escalante,A., Hernandez-Chavez,G., Martinez,A., Bolivar,F., Gosset,G. (2014). Inactivation of Pyruvate Kinase or the Phosphoenolpyruvate: Sugar Phosphotransferase System Increases Shikimic and Dehydroshikimic Acid Yields from Glucose in Bacillus subtilis.
Journal of Molecular Microbiology and Biotechnology,
24 (1),
37-45.
Artículo
64 - Navone,L., Casati,P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Rodriguez,E., Gramajo,H. (2014). Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.
Applied Microbiology and Biotechnology,
98 (1),
351-360.
*
Artículo
65 - Marcellin,E., Licona-Cassani,C., Mercer,T.R., Palfreyman,R.W., Nielsen,L.K. (2013). Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.
BMC Genomics,
14 (1).
*
Artículo
66 - Marcellin,E., Mercer,T.R., Licona-Cassani,C., Palfreyman,R.W., Dinger,M.E., Steen,J.A., Mattick,J.S., Nielsen,L.K. (2013). Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.
BMC Genomics,
14 (1).
*
Artículo
67 - Licona-Cassani,C., Marcellin,E., Quek,L.E., Jacob,S., Nielsen,L.K. (2012). Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.
Antonie Van Leeuwenhoek,
102 (3),
493-502.
*
Artículo
68 - Utrilla,J., Licona-Cassani,C., Marcellin,E., Gosset,G., Nielsen,L.K., Martinez,A. (2012). Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter.
Metabolic Engineering,
14 (5),
469-476.
Memoria in extenso
69 - Ramos-Garcia, A. A., Licona-Cassani, C., Santos-Diaz, A. (2025). Multi-Scale Genomic Signatures and Machine Learning for Enhanced Prediction of Antimicrobial Resistance. IEEE 38th International Symposium on Computer-Based Medical Systems (CBMS), Vol. 00, 1-4 - June 2025.
1-4,
Los Alamitos: IEEE Computer Society.
*
Internacional
70 - Perez-Martinez,D., Mejia-Ponce,P., Licona-Cassani,C., de Igartua,E., Bermudez,G., Viveros,D., Zenteno-Cuevas,R. (2023). Drug Resistance in Tuberculosis: Mechanisms, Diagnosis, New Responses, and the Need for an Integrated Approach. Integrated Science.
331-359,
11.
*
71 - Rezaei, Nima, Hosseini, Nastaran-Sadat, Saghazadeh, Amene, Fateh, Abolfazl, Duse, Adriano, Ahmad, Aijaz, Braley, Alexander E., Tahta, Alican, Kamboj, Alisha, Khan, Amer Hayat, Coelho, Ana Cláudia, Fuso, Andrea, Varón, Andrés, Trajman, Anete, Saxena, Anil Kumar, Ganeshpurkar, Ankit, Casapao, Anthony M., Tkachenko, Anton, Devnikar, Anushka V., Moshiri, Arfa, Muñoz-Barrutia, Arrate, Dasgupta, Arunava, Natarajan, Arvind, Gupta, Ashish, Coyne, Ashlan J. Kunz, Jordan, Ashly E., Kumar, Ashok, Ergeshov, Atadzhan, Pourakbari, Babak, Joshi, Basant, Chavarro-Portillo, Bibiana, Soto, Carlos Y., Kanipe, Carly, Schmidt, Christiane Mello, Cox, Christophe, Gómez-Cruz, Clara, Cardoso, Claudete Aparecida Araújo, Sant´Anna, Clemax Couto, Johnson, Courtney, Rodríguez-Silva, Cristhian N., Rosales, Cristian, Licona-Cassani, Cuauhtémoc, Fast, Cynthia D., Pérez-Martínez, Damián, Pizzol, Damiano, Perlman, David C., Philips, Dennis, Viveros, Diana, Fisher, Dina A., Butov, Dmytro, Egelund, Eric F., de Igartua, Everest, Bhatt, Garima, Mgode, Georgies, Quaglio, Gianluca, Putoto, Giovanni, Mini, G. K., Thomas-Richardson, Govind, Wylie, Greg, dos Santos Fernandes, Guilherme Felipe, Bermúdez, Gustavo, Quintas, Hélder, Verma, Himanshu, Eoh, Hyungjin, Putera, Ikhwanuliman, Sivokozov, Ilya, Pires, Isabel, Lee, Jae Jin, Lombard, Jason E., dos Santos, Jean Leandro, Zellweger, Jean-Pierre, Thomas-Richardson, Jenu, Lordson, Jinbert, Prates, João Lucas, Cervantes, Jorge, Porcel, José M., Vaquero, Juan José, Prada, Justina, Kamboj, Kamal, Tabbara, Khalid F., Mussie, Kirubel Manyazewal, Patel, Krupesh, Porcel, Laura, Fiebig, Lena, Mohan, Malu, Yadav, Mange Ram, López-R, Marcela, Correia-Neves, Margarida, da Conceição Fontes, Maria, de Fátima Pombo Bazhuni Sant´Anna, Maria, Cañadas-Ortega, Marina, Singh, Meenakshi, Lause, Michael, Maya-Hoyos, Milena, Omrani, Mir Davood, Palmer, Mitchell V., Ahmad, Mohammad Naiyaz, Seid, Mohammed Assen, Chauhan, Monica, Saxena, Mridula, Marimani, Musa, Srinivas, Nanduri, Beyene, Negussie, Arenas, Nelson E., Cardoso, Nicole, Oliveira, Olena, Silakari, Om, Inlamea, Osvaldo, Tanriverdi, Özgür, Boggiatto, Paola M., Santos, Paola, Mejía-Ponce, Paulina, Soares, Pedro, Sell, Philip, Murumkar, Prashant R., Devanandan, Praveen, Zheng, Qi, Lim, Rachel K., Aurílio, Rafaela Baroni, Ghuge, Rahul B., Barot, Rahul R., Rahul,, Puvvada, Ranadheer Chowdary, Duarte, Raquel, Singh, Ravi, Sinha, Richa, La Distia Nora, Rina, Burny, Robert, Zenteno-Cuevas, Roberto, Mali, Sagar, Shoughy, Samir S., Tarashi, Samira, Mishra, Sapna, Malasala, Satyaveni, Mamishi, Setareh, Siadat, Seyed Davar, Choudhary, Shalki, Mahmoudi, Shima, Chopra, Sidharth, Nandi, Sisir, Faisal, Sobia, Goel, Sonu, Huszár, Stanislav, Field, Stephen K., Singh, Sushil Kumar, Rito, Teresa, Butova, Tetiana, Manning, Thomas, van der Werf, Tjip S., Myasoedov, Valeriy, Vásquez, Vanessa, Muthukumar, Vijey Aanandhi, Singh, Vinayak, Hall, Walter A., Hikmahwati, Wandya, Turgut, Yasar Baris, Thaker, Yatri, Kawabata, Yoshinori, de Reus, Yvette A. (2023). Tuberculosis: Integrated Studies for a Complex Disease 2050. Tuberculosis: Integrated Studies for a Complex Disease.
1063-1098,
Cham: Springer International Publishing.
*
72 - Perez-Cabeza de Vaca, R., Vairappan, B., Cortes-Espinoza, T., Suarez-Cuenca, J. A., Licona-Cassani, C., Maldonado-Arriaga, B., Navarro-Gerrard, C., Morgan-Penagos, D. S., Mondragon-Teran, P., Chagoya De Sanchez, V. (2021). Spontaneous Bacterial Peritonitis: Physiopathological Mechanism and Clinical Manifestations. Advances in Hepatology.
London: Intech Open.
*
Preprint
73 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,Wilson I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N. (2026). Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey.
bioRxiv,
Preprint posted February 27.
*
Preprint
74 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,W.I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N. (2026). Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey.
bioRxiv,
Preprint posted 27 February.
*
Preprint
75 - Aguilar,C., Verdel-Aranda,K., Ramos-Aboites, H.E., Morales, M.A., Licona-Cassani,C., Barona-Gómez, F. (2020). Convergent evolution of Streptomyces protease inhibitors involving a tRNA-mediated condensation-minus NRPS.
bioRxiv,
Posted October 28.
Artículo
76 - Corona-Cervantes,K., Urrutia-Baca,V.H., Gamez-Valdez,J.S., Jimenez-Lopez,B., Rodriguez-Gutierrez,N.A., Chavez-Caraza,K., Espiricueta-Candelaria,F., Salas-Villalobos,U.A., Ramos-Parra,P.A., Gutierrez-Uribe,J.A., Brunck,M., Chuck-Hernandez,C., Licona-Cassani,C.. Maternal obesity alters human milk oligosaccharides content and correlates with early acquisition of late colonizers in the neonatal gut microbiome.
Gut Microbes,
18 (1),
2607043.
Artículo
77 - Hernandez-Rodriguez,D., Contreras,A., Melgar-Lalanne,G., Lara Arellano,S.S., Meza,J.E., Licona-Cassani,C., Viveros,R.. Fecal microbiota composition concerning body mass index and early-life factors in Mexican preschool-aged children: a cross-sectional study.
PeerJ,
14,
e21253.
Revisión
78 - Perez-Morales,G., Merino,E., Cevallos,M.A., Gosset,G., Licona-Cassani,C., Caspeta,L., Martinez,A.. Toward a systems metabolic engineering approach to improve thermotolerance of Escherichia coli.
Microbial Cell Factories,
25,
108.
Artículo
79 - Puy-Alquiza,M.J, Noriega-Luna,B., Rodriguez-Orduna,L., Licona-Cassani,C., Miranda-Aviles,R., Miranda-Puy,M.Y., Baez-Espinosa,J.R., Moncada-Sanchez,C.D.. Isolation, Genomic Characterization and Biotechnological Potential of Culturable Bacteria from Metal-Rich and Organic Soils of La Soledad Dam, Guanajuato, Mexico.
Geomicrobiology Journal,
43 (8),
1022-1041.
*
Revisión in press
80 - Trejo-Alarcon,L.M., Tierrafria,V.H., Salazar-Garcia,L.M., Gonzalez-Salazar,L.A., Gonzalez-Aquino,J.C., Martinez,A., Licona-Cassani,C.. Translating biosynthetic gene cluster architecture into biosensor design for microbial natural product discovery.
Essays in Biochemistry, Jun 3 [Online ahead of print],
EBC20250015.
Artículo
81 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,W.I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N.. Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey.
ISME Communications,
6 (1),
ycag063.
*
Preprint
82 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,Wilson I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N.. Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey.
bioRxiv,
Preprint posted February 27.
*
Preprint
83 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,W.I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N.. Genome-resolved metagenomics reveals a phylogenetically cohesive Acetilactobacillus-like species complex dominating stingless bee pot honey.
bioRxiv,
Preprint posted 27 February.
*
Artículo
84 - Alvarado-Pena,N., Munoz-Torrico,M., Narvaez-Diaz,L., Mejia-Ponce,P.M, Becerril-Vargas,E., Zuniga,J., Muniz-Salazar,R., Laniado-Laborin,R., Licona-Cassani,C., Soberon,X., Silva-Herzog,E.. Mycobacterium tuberculosis genomic surveillance in Mexico. Characterization of variants in drug resistance and efflux pump genes.
Frontiers in Microbiology,
16,
1666838.
Artículo
85 - Chimal-Munoz,M., Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Mejia-Ponce,P.M., Licona-Cassani,C., Muniz-Salazar,R., Montero,H., Zenteno-Cuevas,R.. Whole-Genome Sequence Analysis to Assess Mutations in Efflux Pumps in Mycobacterium tuberculosis: The Influence in Drug Resistance.
Microorganisms,
13 (6),
1306.
*
Artículo
86 - Elakkya,M., Gonzalez-Salazar,L.A., Lopez-Reyes,K., Rebelo-Romao,I., Sousa,A., Godde,V., Niehaus,K., Thenappan,D.P., Vilchez,J.I., Paul,S., Licona-Cassani,C.. Comparative genomics and metabolomics reveal phytohormone production, nutrient acquisition, and osmotic stress tolerance in Azotobacter chroococcum W5.
Frontiers in Microbiology,
16,
1626016.
Artículo
87 - Gallardo-Camarena,M.V., Reverchon,F., Mendez-Bravo,A., Torres-Acosta,M.A., Licona-Cassani,C.. Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.
AMB Express,
15 (1).
*
Artículo
88 - Gallardo-Camarena,M.V., Torres-Acosta,M.A., Licona-Cassani,C.. Economic evaluation of large-scale production for Colletotrichum antagonists as biocontrol agents against anthracnose.
Journal of Chemical Technology and Biotechnology,
100 (5),
1117-1128.
*
Artículo
89 - Gamez-Valdez,J.S., Corona-Cervantes,K., Sanchez-Salguero,E.S., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Carballo-Castaneda,R.A., Moreno-Ulloa,A., Lara-Diaz,V.J., Brunck,M.E.G., Licona-Cassani,C.. Analysis of human colostrum reveals differential co-occurrence networks of metabolites, microbiota and cytokines in maternal obesity.
Food & Function,
16 (14),
5900-5916.
*
Artículo
90 - Morey-Leon,G., Mejia-Ponce,P.M., Fernandez-Cadena,J.C, Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Fresia,P, Berna,L. Global epidemiology of Mycobacterium tuberculosis lineage 4 insights from Ecuadorian genomic data.
Scientific Reports,
15 (1).
*
Artículo
91 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Gonzalez-Valdez,J., Aguilar,O., Renard,C.M.G.C., Licona-Cassani,C.. Influence of molar ratio and pH on physicochemical characteristics of genipin-derived pigments formed at cold and mild temperatures.
Food Chemistry Advances,
7,
100983.
*
Artículo
92 - Ramos-Garcia,A.A., Mejia-Ponce,P.M., Salem-Mojica,N., Santos-Diaz,A., Martinez-Ledesma,E., Licona-Cassani,C.. FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in Mycobacterium tuberculosis.
Bioinformatics,
41 (7),
btaf341.
Artículo
93 - Rodriguez-Orduna,L., Aguilar,C., Hernandez-Melgar,A.G., Arocha-Garza,H.F., Verdel-Aranda,K., Vazquez-Rodriguez,A., Lopez-Ribot,J.L., Moreno-Ulloa,A., Licona-Cassani,C.. Biodiscovery of Actinomycetota through metabolo-genomics reveals functional diversity across contrasting Mexican ecosystems.
Microbial Genomics,
11 (10),
001557 [corrigendum vol 12 (2)].
Artículo
94 - Salazar-Garcia,L.M., Damas-Ramos,L.C., Trejo-Alarcon,L.M., Rago,D., Ahonen,L., Cruz-Morales,P., Ponce-Noyola,P., Licona-Cassani,C.. CRISPR-driven enhanced hydrocarbon emulsification in an environmental Pseudomonas aeruginosa strain.
Microbial Cell Factories,
24 (1),
151.
Artículo
95 - Trejo-Alarcon,L.M., Cano-Prieto,C., Calheiros de Carvalho,A., Rago,D., Ahonen,L., Cruz-Morales,P., Licona-Cassani,C.. Integrative metabolo-genomics suggests a biosynthetic pathway for tetrangulol in Streptomyces sp. KL110A.
World Journal of Microbiology & Biotechnology,
41 (3).
*
Artículo
96 - Trejo-Alarcon,L.M., Cruz-Morales,P., Licona-Cassani,C.. Draft genome sequence of Streptomyces sp. CC302I with non-canonical biosynthetic gene clusters for codon-readthrough activity.
Microbiology Resource Announcements,
14 (2).
*
Artículo
97 - Zdouc,M.M., Blin,K., Louwen,N.L.L., Navarro,J., Loureiro,C., Bader,C.D., Bailey,C.B., Barra,L., Booth,T.J., Bozhuyuk,K.A.J., Cediel-Becerra,J.D.D., Charlop-Powers,Z., Chevrette,M.G., Chooi,Y.H., D'Agostino,P.M., de Rond T., Del Pup E., Duncan,K.R., Gu,W., Hanif,N., Helfrich,E.J.N., Jenner,M., Katsuyama,Y., Korenskaia,A., Krug,D., Libis,V., Lund,G.A., Mantri,S., Morgan,K.D., Owen,C., Phan,C.S., Philmus,B., Reitz,Z.L., Robinson,S.L., Singh,K.S., Teufel,R., Tong,Y., Tugizimana,F., Ulanova,D., Winter,J.M., Aguilar,C., Akiyama,D.Y., Al-Salihi,S.A.A., Alanjary,M., Alberti,F., Aleti,G., Alharthi,S.A., Rojo,M.Y.A., Arishi,A.A., Augustijn,H.E., Avalon,N.E., Avelar-Rivas,J.A., Axt,K.K., Barbieri,H.B., Barbosa,J.C.J., Barboza Segato,L.G., Barrett,S.E., Baunach,M., Beemelmanns,C., Beqaj,D., Berger,T., Bernaldo-Aguero,J., Bettenbuhl,S.M., Bielinski,V.A., Biermann,F., Borges,R.M., Borriss,R., Breitenbach,M., Bretscher,K.M., Brigham,M.W., Buedenbender,L., Bulcock,B.W., Cano-Prieto,C., Capela,J., Carrion,V.J., Carter,R.S., Castelo-Branco,R., Castro-Falcon,G., Chagas,F.O., Charria-Giron,E., Chaudhri,A.A., Chaudhry,V., Choi,H., Choi,Y., Choupannejad,R., Chromy,J., Donahey,M.S.C., Collemare,J., Connolly,J.A., Creamer,K.E., Crusemann,M., Cruz,A.A., Cumsille,A., Dallery,J.F., Damas-Ramos,L.C., Damiani,T., de Kruijff M., Martin,B.D., Sala,G.D., Dillen,J., Doering,D.T., Dommaraju,S.R., Durusu,S., Egbert,S., Ellerhorst,M., Faussurier,B., Fetter,A., Feuermann,M., Fewer,D.P., Foldi,J., Frediansyah,A., Garza,E.A., Gavriilidou,A., Gentile,A., Gerke,J., Gerstmans,H., Gomez-Escribano,J.P., Gonzalez-Salazar,L.A., Grayson,N.E., Greco,C., Gomez,J.E.G., Guerra,S., Flores,S.G., Gurevich,A., Gutierrez-Garcia,K., Hart,L., Haslinger,K., He,B., Hebra,T., Hemmann,J.L., Hindra,H., Hoing,L., Holland,D.C., Holme,J.E., Horch,T., Hrab,P., Hu,J., Huynh,T.H., Hwang,J.Y., Iacovelli,R., Iftime,D., Iorio,M., Jayachandran,S., Jeong,E., Jing,J., Jung,J.J., Kakumu,Y., Kalkreuter,E., Kang,K.B., Kang,S., Kim,W., Kim,G.J., Kim,H., Kim,H.U., Klapper,M., Koetsier,R.A., Kollten,C., Kovacs,A.T., Kriukova,Y., Kubach,N., Kunjapur,A.M., Kushnareva,A.K., Kust,A., Lamber,J., Larralde,M., Larsen,N.J., Launay,A.P., Le,N.T., Lebeer,S., Lee,B.T., Lee,K., Lev,K.L., Li,S.M., Li,Y.X., Licona-Cassani,C., Lien,A., Liu,J., Lopez,J.A.V., Machushynets,N.V., Macias,M.I., Mahmud,T., Maleckis,M., Martinez-Martinez,A.M., Mast,Y., Maximo,M.F., McBride,C.M., McLellan,R.M., Bhatt,K.M., Melkonian,C., Merrild,A., Metsa-Ketela,M., Mitchell,D.A., Muller,A.V., Nguyen,G.S., Nguyen,H.T., Niedermeyer,T.H.J., O'Hare,J.H., Ossowicki,A., Ostash,B.O., Otani,H., Padva,L., Paliyal,S., Pan,X., Panghal,M., Parade,D.S., Park,J., Parra,J., Rubio,M.P., Pham,H.T., Pidot,S.J., Piel,J., Pourmohsenin,B., Rakhmanov,M., Ramesh,S., Rasmussen,M.H., Rego,A., Reher,R., Rice,A.J., Rigolet,A., Romero-Otero,A., Rosas-Becerra,L.R., Rosiles,P.Y., Rutz,A., Ryu,B., Sahadeo,L.A., Saldanha,M., Salvi,L., Sanchez-Carvajal,E., Santos-Medellin,C., Sbaraini,N., Schoellhorn,S.M., Schumm,C., Sehnal,L., Selem,N., Shah,A.D., Shishido,T.K., Sieber,S., Silviani,V., Singh,G., Singh,H., Sokolova,N., Sonnenschein,E.C., Sosio,M., Sowa,S.T., Steffen,K., Stegmann,E., Streiff,A.B., Struder,A., Surup,F., Svenningsen,T., Sweeney,D., Szenei,J., Tagirdzhanov,A., Tan,B., Tarnowski,M.J.. MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Nucleic Acids Research,
53 (D1),
gkae1115,
D678-D690.
Memoria in extenso
98 - Ramos-Garcia, A. A., Licona-Cassani, C., Santos-Diaz, A.. Multi-Scale Genomic Signatures and Machine Learning for Enhanced Prediction of Antimicrobial Resistance. IEEE 38th International Symposium on Computer-Based Medical Systems (CBMS), Vol. 00, 1-4 - June 2025.
1-4,
Los Alamitos: IEEE Computer Society.
*
Artículo
99 - Aguilar,C., Alwali,A., Mair,M., Rodriguez-Orduna,L., Contreras-Peruyero,H., Modi,R., Roberts,C., Selem-Mojica,N., Licona-Cassani,C., Parkinson,E.I.. Actinomycetota bioprospecting from ore-forming environments.
Microbial Genomics,
10 (5),
001253.
*
Artículo
100 - Alwali,A.Y., Santos,D., Aguilar,C., Birch,A., Rodriguez-Ordunea,L., Roberts,C.B., Modi,R., Licona-Cassani,C., Parkinson,E.I.. Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin.
Journal of Industrial Microbiology & Biotechnology,
51,
kuae014.
*
Artículo
101 - Bermudez-Hernandez,G.A., Perez-Martinez,D., Ortiz-Leon,M.C., Muniz-Salazar,R., Licona-Cassani,C., Zenteno-Cuevas,R.. Mutational Dynamics Related to Antibiotic Resistance in M. tuberculosis Isolates from Serial Samples of Patients with Tuberculosis and Type 2 Diabetes Mellitus.
Microorganisms,
12 (2).
*
Artículo
102 - Contreras-Peruyero,H., Guerrero-Flores,S., Zirion-Martinez,C., Mejia-Ponce,P.M., Navarro-Miranda,M., Lovaco-Flores,J.A., Ibarra-Rodriguez,J.M., Pashkov,A., Licona-Cassani,C., Selem-Mojica,N.. Meeting the challenge of genomic analysis: a collaboratively developed workshop for pangenomics and topological data analysis.
Bioinformatics Advances,
4 (1).
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Artículo
103 - Deantas-Jahn,C., Mendoza,S.N., Licona-Cassani,C., Orellana,C., Saa,P.A.. Metabolic modeling of Halomonas campaniensis improves polyhydroxybutyrate production under nitrogen limitation.
Applied Microbiology and Biotechnology,
108 (1),
310.
*
Artículo
104 - Lozano-Aguirre,L., Avitia,M., Lappe-Oliveras,P., Licona-Cassani,C., Cevallos,M.A., Le Borgne,S.. Draft genomes of four Kluyveromyces marxianus isolates retrieved from the elaboration process of henequen (Agave fourcroydes) mezcal.
Microbiology Resource Announcements,
13 (3).
*
Artículo
105 - Mejia-Ponce,P.M., Chimal-Munoz,M., Zenteno-Cuevas,R., Licona-Cassani,C.. Draft genome sequences of 12 Mycolicibacterium fortuitum isolates from human pulmonary infections in Veracruz, Mexico.
Microbiology Resource Announcements,
13 (4).
*
Artículo
106 - Rodriguez-Orduna,L., Lara-Diaz,V.J., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Licona-Cassani,C.. Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.
Microbiology Resource Announcements,
13 (9).
*
Artículo
107 - Zuffa,S., Schmid,R., Bauermeister,A., Gomes,P., Caraballo-Rodriguez,A.M., El Abiead,Y., Aron,A.T., Gentry,E.C., Zemlin,J., Meehan,M.J., Avalon,N.E., Cichewicz,R.H., Buzun,E., Terrazas,M.C., Hsu,C.Y., Oles,R., Ayala,A.V., Zhao,J., Chu,H., Kuijpers,M.C.M., Jackrel,S.L., Tugizimana,F., Nephali,L.P., Dubery,I.A., Madala,N.E., Moreira,E.A., Costa-Lotufo,L.V., Lopes,N.P., Rezende-Teixeira,P., Jimenez,P.C., Rimal,B., Patterson,A.D., Traxler,M.F., Pessotti,R.D.C., varado-Villalobos,D., Tamayo-Castillo,G., Chaverri,P., Escudero-Leyva,E., Quiros-Guerrero,L.M., Bory,A.J., Joubert,J., Rutz,A., Wolfender,J.L., Allard,P.M., Sichert,A., Pontrelli,S., Pullman,B.S., Bandeira,N., Gerwick,W.H., Gindro,K., Massana-Codina,J., Wagner,B.C., Forchhammer,K., Petras,D., Aiosa,N., Garg,N., Liebeke,M., Bourceau,P., Kang,K.B., Gadhavi,H., de Carvalho,L.P.S., Silva dos Santos,M., Perez-Lorente,A.I., Molina-Santiago,C., Romero,D., Franke,R., Bronstrup,M., Vera Ponce de Leon,A., Pope,P.B., La Rosa,S.L., La Barbera,G., Roager,H.M., Laursen,M.F., Hammerle,F., Siewert,B., Peintner,U., Licona-Cassani,C., Rodriguez-Orduna,L., Rampler,E., Hildebrand,F., Koellensperger,G., Schoeny,H., Hohenwallner,K., Panzenboeck,L., Gregor,R., O'Neill,E.C., Roxborough,E.T., Odoi,J., Bale,N.J., Ding,S., Sinninghe Damste,J.S., Guan,X.L., Cui,J.J., Ju,K.S., Silva,D.B., Silva,F.M.R., da Silva,G.F., Koolen,H.H.F., Grundmann,C., Clement,J.A., Mohimani,H., Broders,K., McPhail,K.L., Ober-Singleton,S.E., Rath,C.M., McDonald,D., Knight,R., Wang,M., Dorrestein,P.C.. microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nature Microbiology,
9 (2),
336-345.
*
Artículo
108 - Gonzalez-Salazar,L.A., Quezada,M., Rodriguez-Orduna,L., Ramos-Aboites,H., Capon,R.J., Souza-Saldivar,V., Barona-Gomez,F., Licona-Cassani,C.. Biosynthetic novelty index reveals the metabolic potential of rare actinobacteria isolated from highly oligotrophic sediments.
Microbial Genomics,
9 (1).
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Artículo
109 - Mejia-Ponce,P.M., Ramos-Gonzalez,E.J., Ramos-Garcia,A.A., Lara-Ramirez,E.E., Soriano-Herrera,A.R., Medellin-Luna,M.F., Valdez-Salazar,F., Castro-Garay,C.Y., Nunez-Contreras,J.J., De Donato-Capote,M., Sharma,A., Castaneda-Delgado,J.E., Zenteno-Cuevas,R., Enciso-Moreno,J.A., Licona-Cassani,C.. Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
PLoS ONE,
18 (10 October).
*
Artículo
110 - Morey-Leon,G., Mejia-Ponce,P.M., Granda Pardo,J.C., Munoz-Mawyin,K., Fernandez-Cadena,J.C., Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Berna,L.. A precision overview of genomic resistance screening in Ecuadorian isolates of Mycobacterium tuberculosis using web-based bioinformatics tools.
PLoS ONE,
18 (12 December).
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Artículo nacional
111 - Perez-Cabeza de Vaca,R., Cortes-Espinosa,T., Maldonado-Arriaga,B., Suarez-Cuenca,J.A., Sandoval-Jimenez,S., Mondragon-Teran,P., Navarro-Gerrard,C., Paredes-Amenabar,C., Corazon-Trujillo de la Fuente,K., Romero-Lozania,J.A., Lopez-Gomez,J.G., Licona-Cassani,C.. Vedolizumab como terapia primaria en colitis ulcerosa y en la enfermedad de Crohn de moderada a grave: revisión y metaanálisis.
Revista mexicana de enfermedades inflamatorias inmunomediadas,
95 (2),
31-39.
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Artículo
112 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Renard,C.M.G.C., Contreras-Esquivel,J.C., Rodriguez-Rodriguez,J., Aguilar,O., Gonzalez-Valdez,J., Licona-Cassani,C.. Physical characterization of genipin complexes coupled with multivariate data analysis to assess formed pigments.
Colloids and Surfaces A: Physicochemical and Engineering Aspects,
673,
131774.
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Artículo
113 - Rodriguez-Sanchez,A.C., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Cumsille,A., Undabarrena,A., Camara,B., Selem-Mojica,N., Licona-Cassani,C.. Phylogenetic classification of natural product biosynthetic gene clusters based on regulatory mechanisms.
Frontiers in Microbiology,
14.
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Artículo
114 - Urrutia-Baca,V.H., Chuck-Hernandez,C., Gutierrez-Uribe,J., Ramos-Parra,P.A., Licona-Cassani,C.. Development and validation of a versatile analytical method for absolute quantification of seven oligosaccharides in human, bovine, and goat milk.
Heliyon,
9 (11).
*
Internacional
115 - Perez-Martinez,D., Mejia-Ponce,P., Licona-Cassani,C., de Igartua,E., Bermudez,G., Viveros,D., Zenteno-Cuevas,R.. Drug Resistance in Tuberculosis: Mechanisms, Diagnosis, New Responses, and the Need for an Integrated Approach. Integrated Science.
331-359,
11.
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116 - Rezaei, Nima, Hosseini, Nastaran-Sadat, Saghazadeh, Amene, Fateh, Abolfazl, Duse, Adriano, Ahmad, Aijaz, Braley, Alexander E., Tahta, Alican, Kamboj, Alisha, Khan, Amer Hayat, Coelho, Ana Cláudia, Fuso, Andrea, Varón, Andrés, Trajman, Anete, Saxena, Anil Kumar, Ganeshpurkar, Ankit, Casapao, Anthony M., Tkachenko, Anton, Devnikar, Anushka V., Moshiri, Arfa, Muñoz-Barrutia, Arrate, Dasgupta, Arunava, Natarajan, Arvind, Gupta, Ashish, Coyne, Ashlan J. Kunz, Jordan, Ashly E., Kumar, Ashok, Ergeshov, Atadzhan, Pourakbari, Babak, Joshi, Basant, Chavarro-Portillo, Bibiana, Soto, Carlos Y., Kanipe, Carly, Schmidt, Christiane Mello, Cox, Christophe, Gómez-Cruz, Clara, Cardoso, Claudete Aparecida Araújo, Sant´Anna, Clemax Couto, Johnson, Courtney, Rodríguez-Silva, Cristhian N., Rosales, Cristian, Licona-Cassani, Cuauhtémoc, Fast, Cynthia D., Pérez-Martínez, Damián, Pizzol, Damiano, Perlman, David C., Philips, Dennis, Viveros, Diana, Fisher, Dina A., Butov, Dmytro, Egelund, Eric F., de Igartua, Everest, Bhatt, Garima, Mgode, Georgies, Quaglio, Gianluca, Putoto, Giovanni, Mini, G. K., Thomas-Richardson, Govind, Wylie, Greg, dos Santos Fernandes, Guilherme Felipe, Bermúdez, Gustavo, Quintas, Hélder, Verma, Himanshu, Eoh, Hyungjin, Putera, Ikhwanuliman, Sivokozov, Ilya, Pires, Isabel, Lee, Jae Jin, Lombard, Jason E., dos Santos, Jean Leandro, Zellweger, Jean-Pierre, Thomas-Richardson, Jenu, Lordson, Jinbert, Prates, João Lucas, Cervantes, Jorge, Porcel, José M., Vaquero, Juan José, Prada, Justina, Kamboj, Kamal, Tabbara, Khalid F., Mussie, Kirubel Manyazewal, Patel, Krupesh, Porcel, Laura, Fiebig, Lena, Mohan, Malu, Yadav, Mange Ram, López-R, Marcela, Correia-Neves, Margarida, da Conceição Fontes, Maria, de Fátima Pombo Bazhuni Sant´Anna, Maria, Cañadas-Ortega, Marina, Singh, Meenakshi, Lause, Michael, Maya-Hoyos, Milena, Omrani, Mir Davood, Palmer, Mitchell V., Ahmad, Mohammad Naiyaz, Seid, Mohammed Assen, Chauhan, Monica, Saxena, Mridula, Marimani, Musa, Srinivas, Nanduri, Beyene, Negussie, Arenas, Nelson E., Cardoso, Nicole, Oliveira, Olena, Silakari, Om, Inlamea, Osvaldo, Tanriverdi, Özgür, Boggiatto, Paola M., Santos, Paola, Mejía-Ponce, Paulina, Soares, Pedro, Sell, Philip, Murumkar, Prashant R., Devanandan, Praveen, Zheng, Qi, Lim, Rachel K., Aurílio, Rafaela Baroni, Ghuge, Rahul B., Barot, Rahul R., Rahul,, Puvvada, Ranadheer Chowdary, Duarte, Raquel, Singh, Ravi, Sinha, Richa, La Distia Nora, Rina, Burny, Robert, Zenteno-Cuevas, Roberto, Mali, Sagar, Shoughy, Samir S., Tarashi, Samira, Mishra, Sapna, Malasala, Satyaveni, Mamishi, Setareh, Siadat, Seyed Davar, Choudhary, Shalki, Mahmoudi, Shima, Chopra, Sidharth, Nandi, Sisir, Faisal, Sobia, Goel, Sonu, Huszár, Stanislav, Field, Stephen K., Singh, Sushil Kumar, Rito, Teresa, Butova, Tetiana, Manning, Thomas, van der Werf, Tjip S., Myasoedov, Valeriy, Vásquez, Vanessa, Muthukumar, Vijey Aanandhi, Singh, Vinayak, Hall, Walter A., Hikmahwati, Wandya, Turgut, Yasar Baris, Thaker, Yatri, Kawabata, Yoshinori, de Reus, Yvette A.. Tuberculosis: Integrated Studies for a Complex Disease 2050. Tuberculosis: Integrated Studies for a Complex Disease.
1063-1098,
Cham: Springer International Publishing.
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Artículo
117 - Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Madrazo-Moya,C.F., Cancino-Munoz,I., Montero,H., Licona-Cassani,C., Muniz-Salazar,R., Comas,I., Zenteno-Cuevas,R.. SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance.
Genes,
13 (4).
*
Artículo
118 - Pineiro-Salvador,R., Vazquez-Garza,E., Cruz-Cardenas,J.A., Licona-Cassani,C., Garcia-Rivas,G., Moreno-Vasquez,J., Alcorta-Garcia,M.R., Lara-Diaz,V.J., Brunck,M.E.G.. A cross-sectional study evidences regulations of leukocytes in the colostrum of mothers with obesity.
BMC Medicine,
20 (1).
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Artículo
119 - Thenappan,D.P., Gonzalez-Salazar,L.A., Licona-Cassani,C., Kannepalli,A.. Draft Genome Sequence of Streptomyces sp. Strain FB2, Isolated from Rice Rhizosphere.
Microbiology Resource Announcements,
11 (6).
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Artículo
120 - Enriquez-Ochoa,D., Melendez-Martinez,D., Aguilar-Yanez,J.M., Licona-Cassani,C., Mayolo-Deloisa,K.. Development of aqueous two-phase systems-based approaches for the selective recovery of metalloproteases and phospholipases A2 toxins from Crotalus molossus nigrescens venom.
Bioresources and Bioprocessing,
8 (1).
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Artículo
121 - Flores-Gatica,M., Castaneda-Aponte,H., Gil-Garzon,M.R., Mora-Galvez,L.M., Banda-Magana,M.P., Jauregui-Jauregui,J.A., Torres-Acosta,M.A., Mayolo-Deloisa,K., Licona-Cassani,C.. Primary recovery of hyaluronic acid produced in Streptococcus equi subsp. zooepidemicus using PEG?_"citrate aqueous two-phase systems.
AMB Express,
11 (1),
123.
*
Artículo
122 - Gamez-Valdez,J.S., Garcia-Mazcorro,J.F., Montoya-Rincon,A.H., Rodriguez-Reyes,D.L., Jimenez-Blanco,G., Alanis-Rodriguez,M.T., Perez-Cabeza de Vaca,R., Alcorta-Garcia,M.R., Brunck,M., Lara-Diaz,V.J., Licona-Cassani,C.. Differential analysis of the bacterial community in colostrum samples from women with gestational diabetes mellitus and obesity.
Scientific Reports,
11 (1).
*
Artículo
123 - Jimenez-Ruano,A.C., Madrazo-Moya,C.F., Cancino-Munoz,I., Mejia-Ponce,P.M., Licona-Cassani,C., Comas,I., Muniz-Salazar,R., Zenteno-Cuevas,R.. Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance.
Scientific Reports,
11 (1),
1870.
*
Artículo
124 - Maldonado-Arriaga,B., Sandoval-Jimenez,S., Rodriguez-Silverio,J., Alcaraz-Estrada,S.L., Cortes-Espinosa,T., Perez-Cabeza de Vaca,R., Licona-Cassani,C., Gomez-Valdez,J.S., Shaw,J., Mondragon-Teran,P., Hernandez-Cortez,C., Suarez-Cuenca,J.A., Castro-Escarpulli,G.. Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis.
Microbiologyopen,
10 (2).
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Artículo
125 - Torres-Acosta,M.A., Castaneda-Aponte,H.M., Mora-Galvez,L.M., Gil-Garzon,M.R., Banda-Magana,M.P., Marcellin,E., Mayolo-Deloisa,K., Licona-Cassani,C.. Comparative Economic Analysis Between Endogenous and Recombinant Production of Hyaluronic Acid.
Frontiers in Bioengineering and Biotechnology,
9.
*
126 - Perez-Cabeza de Vaca, R., Vairappan, B., Cortes-Espinoza, T., Suarez-Cuenca, J. A., Licona-Cassani, C., Maldonado-Arriaga, B., Navarro-Gerrard, C., Morgan-Penagos, D. S., Mondragon-Teran, P., Chagoya De Sanchez, V.. Spontaneous Bacterial Peritonitis: Physiopathological Mechanism and Clinical Manifestations. Advances in Hepatology.
London: Intech Open.
*
Revisión
127 - Avila-Rodriguez,M.I., Melendez-Martinez,D., Licona-Cassani,C., Aguilar-Yanez,J.M., Benavides,J., Sanchez,M.L.. Practical context of enzymatic treatment for wound healing: A secreted protease approach (review).
Biomedical Reports,
13 (1),
3-14.
*
Artículo
128 - Gallegos-Lopez,S., Mejia-Ponce,P.M., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Souza-Saldivar,V., Licona-Cassani,C.. Draft Genome Sequence of Streptomyces sp. Strain C8S0, isolated from a highly oligotrophic sediment.
Microbiology Resource Announcements,
9 (14).
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Artículo
129 - Garcia-Mazcorro,J.F., Kawas,J.R., Licona-Cassani,C., Mertens-Talcott,S., Noratto,G.. Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity.
PeerJ,
8.
*
Artículo
130 - Garza-Aguilar,S.M., Garcia-Salinas,C., Mejia-Ponce,P.M, Licona-Cassani,C, Ramos-Parra,P.A, Diaz de la Garza,R.I.. The complexity of folate polyglutamylation in plants: Postharvest ripening and ethylene modulate polyglutamylated profiles in climacteric fruits plus systematic analysis of the glutamyl tail-editing enzymes.
Scientia Horticulturae,
273 (109588).
*
Artículo
131 - Melendez-Martinez,D., Plenge-Tellechea,L.F., Gatica-Colima,A., Cruz-Perez,M.S., Aguilar-Yanez,J.M., Licona-Cassani,C.. Functional mining of the crotalus spp. venom protease repertoire reveals potential for chronic wound therapeutics.
Molecules,
25 (15).
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Artículo
132 - Orellana,C.A., Zaragoza,N.E., Licona-Cassani,C., Palfreyman,R.W., Cowie,N., Moonen,G., Moutafis,G., Power,J., Nielsen,L.K., Marcellin,E.. Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani.
Journal of Industrial Microbiology & Biotechnology,
47 (12),
1059-1073.
*
Preprint
133 - Aguilar,C., Verdel-Aranda,K., Ramos-Aboites, H.E., Morales, M.A., Licona-Cassani,C., Barona-Gómez, F.. Convergent evolution of Streptomyces protease inhibitors involving a tRNA-mediated condensation-minus NRPS.
bioRxiv,
Posted October 28.
Artículo
134 - Khalil,Z.G., Cruz-Morales,P., Licona-Cassani,C., Marcellin,E., Capon,R.J.. Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.
ISME Journal,
13 (1),
147-158.
*
Artículo
135 - Cruz-Morales,P., Ramos-Aboites,H.E., Licona-Cassani,C., Selem-Mojica,N., Mejia-Ponce,P.M., Souza-Saldivar,V., Barona-Gomez,F.. Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.
FEMS Microbiology Ecology,
93 (9).
*
Artículo
136 - Quezada,M., Licona-Cassani,C., Cruz-Morales,P., Salim,A.A., Marcellin,E., Capon,R.J., Barona-Gomez,F.. Diverse cone-snail species harbor closely related Streptomyces species with conserved chemical and genetic profiles, including polycyclic tetramic acid macrolactams.
Frontiers in Microbiology,
8 (NOV).
*
Artículo
137 - Steffani-Vallejo,J.L., Zuniga,C., Cruz-Morales,P., Lozano,L., Morales,M., Licona-Cassani,C., Revah,S., Utrilla,J.. Draft genome sequence of sphingobacterium sp. CZ-UAM, isolated from a methanotrophic consortium.
Genome Announcements,
5 (33).
*
Artículo
138 - Licona-Cassani,C., Steen,J.A., Zaragoza,N.E., Moonen,G., Moutafis,G., Hodson,M.P., Power,J., Nielsen,L.K., Marcellin,E.. Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.
Anaerobe,
41,
113-124.
*
Artículo
139 - Marcellin,E., Behrendorff,J.B., Nagaraju,S., Detissera,S., Segovia,S., Palfreyman,R.W., Daniell,J., Licona-Cassani,C., Quek,L.E., Speight,R., Hodson,M.P., Simpson,S.D., Mitchell,W.P., Kopke,M., Nielsen,L.K.. Low carbon fuels and commodity chemicals from waste gases-systematic approach to understand energy metabolism in a model acetogen.
Green Chemistry,
18 (10),
3020-3028.
*
Artículo
140 - Tierrafria,V.H., Licona-Cassani,C., Maldonado-Carmona,N., Romero-Rodriguez,A., Centeno-Leija,S., Marcellin,E., Rodriguez-Sanoja,R., Ruiz-Villafan,B., Nielsen,L.K., Sanchez,S.. Deletion of the hypothetical protein SCO2127 of Streptomyces coelicolor allowed identification of a new regulator of actinorhodin production.
Applied Microbiology and Biotechnology,
100 (21),
9229-9237 [Correction 104 (8) 3687].
*
Revisión
141 - Licona-Cassani,C., Cruz-Morales,P., Manteca,A., Barona-Gomez,F., Nielsen,L.K., Marcellin,E.. Systems Biology Approaches to Understand Natural Products Biosynthesis.
Frontiers in Bioengineering and Biotechnology,
3.
*
Artículo
142 - Navone,L., Macagno,J.P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Gramajo,H., Rodriguez,E.. AllR controls the expression of Streptomyces coelicolor allantoin pathway genes.
Applied and Environmental Microbiology,
81 (19),
6649-6659.
*
Artículo
143 - Liao,C., Rigali,S., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Ye,B.C.. Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.
Microbiology (United Kingdom),
160 (9),
1914-1928.
*
Artículo
144 - Licona-Cassani,C., Lim,S., Marcellin,E., Nielsen,L.K.. Temporal dynamics of the saccharopolyspora erythraea phosphoproteome.
Molecular and Cellular Proteomics,
13 (5),
1219-1230.
*
Artículo
145 - Licona-Cassani,C., Lara,A.R., Cabrera-Valladares,N., Escalante,A., Hernandez-Chavez,G., Martinez,A., Bolivar,F., Gosset,G.. Inactivation of Pyruvate Kinase or the Phosphoenolpyruvate: Sugar Phosphotransferase System Increases Shikimic and Dehydroshikimic Acid Yields from Glucose in Bacillus subtilis.
Journal of Molecular Microbiology and Biotechnology,
24 (1),
37-45.
Artículo
146 - Navone,L., Casati,P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Rodriguez,E., Gramajo,H.. Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.
Applied Microbiology and Biotechnology,
98 (1),
351-360.
*
Artículo
147 - Marcellin,E., Licona-Cassani,C., Mercer,T.R., Palfreyman,R.W., Nielsen,L.K.. Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.
BMC Genomics,
14 (1).
*
Artículo
148 - Marcellin,E., Mercer,T.R., Licona-Cassani,C., Palfreyman,R.W., Dinger,M.E., Steen,J.A., Mattick,J.S., Nielsen,L.K.. Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.
BMC Genomics,
14 (1).
*
Artículo
149 - Licona-Cassani,C., Marcellin,E., Quek,L.E., Jacob,S., Nielsen,L.K.. Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.
Antonie Van Leeuwenhoek,
102 (3),
493-502.
*
Artículo
150 - Utrilla,J., Licona-Cassani,C., Marcellin,E., Gosset,G., Nielsen,L.K., Martinez,A.. Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter.
Metabolic Engineering,
14 (5),
469-476.