Dr. Cuauhtémoc Licona Cassani
Investigador Titular A Tiempo Completo
Doctorado, Dr. en Filosofía
* Indica publicación con otra institución de adscripción
Total de publicaciones: 62
- Tipo
- Fecha
Artículo
1 - Alvarado-Pena,N., Munoz-Torrico,M., Narvaez-Diaz,L., Mejia-Ponce,P.M, Becerril-Vargas,E., Zuniga,J., Muniz-Salazar,R., Laniado-Laborin,R., Licona-Cassani,C., Soberon,X., Silva-Herzog,E. (2025). Mycobacterium tuberculosis genomic surveillance in Mexico. Characterization of variants in drug resistance and efflux pump genes.
Frontiers in Microbiology,
16,
1666838.
Artículo
2 - Elakkya,M., Gonzalez-Salazar,L.A., Lopez-Reyes,K., Rebelo-Romao,I., Sousa,A., Godde,V., Niehaus,K., Thenappan,D.P., Vilchez,J.I., Paul,S., Licona-Cassani,C. (2025). Comparative genomics and metabolomics reveal phytohormone production, nutrient acquisition, and osmotic stress tolerance in Azotobacter chroococcum W5.
Frontiers in Microbiology,
16,
1626016.
Artículo
3 - Gallardo-Camarena,M.V., Reverchon,F., Mendez-Bravo,A., Torres-Acosta,M.A., Licona-Cassani,C. (2025). Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.
AMB Express,
15 (1).
*
Artículo
4 - Gallardo-Camarena,M.V., Torres-Acosta,M.A., Licona-Cassani,C. (2025). Economic evaluation of large-scale production for Colletotrichum antagonists as biocontrol agents against anthracnose.
Journal of Chemical Technology and Biotechnology,
100 (5),
1117-1128.
*
Artículo
5 - Morey-Leon,G., Mejia-Ponce,P.M., Fernandez-Cadena,J.C, Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Fresia,P, Berna,L (2025). Global epidemiology of Mycobacterium tuberculosis lineage 4 insights from Ecuadorian genomic data.
Scientific Reports,
15 (1).
*
Artículo
6 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Gonzalez-Valdez,J., Aguilar,O., Renard,C.M.G.C., Licona-Cassani,C. (2025). Influence of molar ratio and pH on physicochemical characteristics of genipin-derived pigments formed at cold and mild temperatures.
Food Chemistry Advances,
7,
100983.
*
Artículo
7 - Ramos-Garcia,A.A., Mejia-Ponce,P.M., Salem-Mojica,N., Santos-Diaz,A., Martinez-Ledesma,E., Licona-Cassani,C. (2025). FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in Mycobacterium tuberculosis.
Bioinformatics,
41 (7),
btaf341.
Artículo
8 - Rodriguez-Orduna,L., Aguilar,C., Hernandez-Melgar,A.G., Arocha-Garza,H.F., Verdel-Aranda,K., Vazquez-Rodriguez,A., Lopez-Ribot,J.L., Moreno-Ulloa,A., Licona-Cassani,C. (2025). Biodiscovery of Actinomycetota through metabolo-genomics reveals functional diversity across contrasting Mexican ecosystems.
Microbial Genomics,
11 (10),
001557.
Artículo
9 - Salazar-Garcia,L.M., Damas-Ramos,L.C., Trejo-Alarcon,L.M., Rago,D., Ahonen,L., Cruz-Morales,P., Ponce-Noyola,P., Licona-Cassani,C. (2025). CRISPR-driven enhanced hydrocarbon emulsification in an environmental Pseudomonas aeruginosa strain.
Microbial Cell Factories,
24 (1),
151.
Artículo
10 - Trejo-Alarcon,L.M., Cano-Prieto,C., Calheiros de Carvalho,A., Rago,D., Ahonen,L., Cruz-Morales,P., Licona-Cassani,C. (2025). Integrative metabolo-genomics suggests a biosynthetic pathway for tetrangulol in Streptomyces sp. KL110A.
World Journal of Microbiology & Biotechnology,
41 (3).
*
Artículo
11 - Trejo-Alarcon,L.M., Cruz-Morales,P., Licona-Cassani,C. (2025). Draft genome sequence of Streptomyces sp. CC302I with non-canonical biosynthetic gene clusters for codon-readthrough activity.
Microbiology Resource Announcements,
14 (2).
*
Artículo
12 - Zdouc,M.M., Blin,K., Louwen,N.L.L., Navarro,J., Loureiro,C., Bader,C.D., Bailey,C.B., Barra,L., Booth,T.J., Bozhuyuk,K.A.J., Cediel-Becerra,J.D.D., Charlop-Powers,Z., Chevrette,M.G., Chooi,Y.H., D'Agostino,P.M., de Rond T., Del Pup E., Duncan,K.R., Gu,W., Hanif,N., Helfrich,E.J.N., Jenner,M., Katsuyama,Y., Korenskaia,A., Krug,D., Libis,V., Lund,G.A., Mantri,S., Morgan,K.D., Owen,C., Phan,C.S., Philmus,B., Reitz,Z.L., Robinson,S.L., Singh,K.S., Teufel,R., Tong,Y., Tugizimana,F., Ulanova,D., Winter,J.M., Aguilar,C., Akiyama,D.Y., Al-Salihi,S.A.A., Alanjary,M., Alberti,F., Aleti,G., Alharthi,S.A., Rojo,M.Y.A., Arishi,A.A., Augustijn,H.E., Avalon,N.E., Avelar-Rivas,J.A., Axt,K.K., Barbieri,H.B., Barbosa,J.C.J., Barboza Segato,L.G., Barrett,S.E., Baunach,M., Beemelmanns,C., Beqaj,D., Berger,T., Bernaldo-Aguero,J., Bettenbuhl,S.M., Bielinski,V.A., Biermann,F., Borges,R.M., Borriss,R., Breitenbach,M., Bretscher,K.M., Brigham,M.W., Buedenbender,L., Bulcock,B.W., Cano-Prieto,C., Capela,J., Carrion,V.J., Carter,R.S., Castelo-Branco,R., Castro-Falcon,G., Chagas,F.O., Charria-Giron,E., Chaudhri,A.A., Chaudhry,V., Choi,H., Choi,Y., Choupannejad,R., Chromy,J., Donahey,M.S.C., Collemare,J., Connolly,J.A., Creamer,K.E., Crusemann,M., Cruz,A.A., Cumsille,A., Dallery,J.F., Damas-Ramos,L.C., Damiani,T., de Kruijff M., Martin,B.D., Sala,G.D., Dillen,J., Doering,D.T., Dommaraju,S.R., Durusu,S., Egbert,S., Ellerhorst,M., Faussurier,B., Fetter,A., Feuermann,M., Fewer,D.P., Foldi,J., Frediansyah,A., Garza,E.A., Gavriilidou,A., Gentile,A., Gerke,J., Gerstmans,H., Gomez-Escribano,J.P., Gonzalez-Salazar,L.A., Grayson,N.E., Greco,C., Gomez,J.E.G., Guerra,S., Flores,S.G., Gurevich,A., Gutierrez-Garcia,K., Hart,L., Haslinger,K., He,B., Hebra,T., Hemmann,J.L., Hindra,H., Hoing,L., Holland,D.C., Holme,J.E., Horch,T., Hrab,P., Hu,J., Huynh,T.H., Hwang,J.Y., Iacovelli,R., Iftime,D., Iorio,M., Jayachandran,S., Jeong,E., Jing,J., Jung,J.J., Kakumu,Y., Kalkreuter,E., Kang,K.B., Kang,S., Kim,W., Kim,G.J., Kim,H., Kim,H.U., Klapper,M., Koetsier,R.A., Kollten,C., Kovacs,A.T., Kriukova,Y., Kubach,N., Kunjapur,A.M., Kushnareva,A.K., Kust,A., Lamber,J., Larralde,M., Larsen,N.J., Launay,A.P., Le,N.T., Lebeer,S., Lee,B.T., Lee,K., Lev,K.L., Li,S.M., Li,Y.X., Licona-Cassani,C., Lien,A., Liu,J., Lopez,J.A.V., Machushynets,N.V., Macias,M.I., Mahmud,T., Maleckis,M., Martinez-Martinez,A.M., Mast,Y., Maximo,M.F., McBride,C.M., McLellan,R.M., Bhatt,K.M., Melkonian,C., Merrild,A., Metsa-Ketela,M., Mitchell,D.A., Muller,A.V., Nguyen,G.S., Nguyen,H.T., Niedermeyer,T.H.J., O'Hare,J.H., Ossowicki,A., Ostash,B.O., Otani,H., Padva,L., Paliyal,S., Pan,X., Panghal,M., Parade,D.S., Park,J., Parra,J., Rubio,M.P., Pham,H.T., Pidot,S.J., Piel,J., Pourmohsenin,B., Rakhmanov,M., Ramesh,S., Rasmussen,M.H., Rego,A., Reher,R., Rice,A.J., Rigolet,A., Romero-Otero,A., Rosas-Becerra,L.R., Rosiles,P.Y., Rutz,A., Ryu,B., Sahadeo,L.A., Saldanha,M., Salvi,L., Sanchez-Carvajal,E., Santos-Medellin,C., Sbaraini,N., Schoellhorn,S.M., Schumm,C., Sehnal,L., Selem,N., Shah,A.D., Shishido,T.K., Sieber,S., Silviani,V., Singh,G., Singh,H., Sokolova,N., Sonnenschein,E.C., Sosio,M., Sowa,S.T., Steffen,K., Stegmann,E., Streiff,A.B., Struder,A., Surup,F., Svenningsen,T., Sweeney,D., Szenei,J., Tagirdzhanov,A., Tan,B., Tarnowski,M.J. (2025). MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Nucleic Acids Research,
53 (D1),
gkae1115,
D678-D690.
Artículo
13 - Aguilar,C., Alwali,A., Mair,M., Rodriguez-Orduna,L., Contreras-Peruyero,H., Modi,R., Roberts,C., Selem-Mojica,N., Licona-Cassani,C., Parkinson,E.I. (2024). Actinomycetota bioprospecting from ore-forming environments.
Microbial Genomics,
10 (5),
001253.
*
Artículo
14 - Alwali,A.Y., Santos,D., Aguilar,C., Birch,A., Rodriguez-Ordunea,L., Roberts,C.B., Modi,R., Licona-Cassani,C., Parkinson,E.I. (2024). Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin.
Journal of Industrial Microbiology & Biotechnology,
51,
kuae014.
*
Artículo
15 - Bermudez-Hernandez,G.A., Perez-Martinez,D., Ortiz-Leon,M.C., Muniz-Salazar,R., Licona-Cassani,C., Zenteno-Cuevas,R. (2024). Mutational Dynamics Related to Antibiotic Resistance in M. tuberculosis Isolates from Serial Samples of Patients with Tuberculosis and Type 2 Diabetes Mellitus.
Microorganisms,
12 (2).
*
Artículo
16 - Contreras-Peruyero,H., Guerrero-Flores,S., Zirion-Martinez,C., Mejia-Ponce,P.M., Navarro-Miranda,M., Lovaco-Flores,J.A., Ibarra-Rodriguez,J.M., Pashkov,A., Licona-Cassani,C., Selem-Mojica,N. (2024). Meeting the challenge of genomic analysis: a collaboratively developed workshop for pangenomics and topological data analysis.
Bioinformatics Advances,
4 (1).
*
Artículo
17 - Deantas-Jahn,C., Mendoza,S.N., Licona-Cassani,C., Orellana,C., Saa,P.A. (2024). Metabolic modeling of Halomonas campaniensis improves polyhydroxybutyrate production under nitrogen limitation.
Applied Microbiology and Biotechnology,
108 (1),
310.
*
Artículo
18 - Lozano-Aguirre,L., Avitia,M., Lappe-Oliveras,P., Licona-Cassani,C., Cevallos,M.A., Le Borgne,S. (2024). Draft genomes of four Kluyveromyces marxianus isolates retrieved from the elaboration process of henequen (Agave fourcroydes) mezcal.
Microbiology Resource Announcements,
13 (3).
*
Artículo
19 - Mejia-Ponce,P.M., Chimal-Munoz,M., Zenteno-Cuevas,R., Licona-Cassani,C. (2024). Draft genome sequences of 12 Mycolicibacterium fortuitum isolates from human pulmonary infections in Veracruz, Mexico.
Microbiology Resource Announcements,
13 (4).
*
Artículo
20 - Rodriguez-Orduna,L., Lara-Diaz,V.J., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Licona-Cassani,C. (2024). Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.
Microbiology Resource Announcements,
13 (9).
*
Artículo
21 - Zuffa,S., Schmid,R., Bauermeister,A., Gomes,P., Caraballo-Rodriguez,A.M., El Abiead,Y., Aron,A.T., Gentry,E.C., Zemlin,J., Meehan,M.J., Avalon,N.E., Cichewicz,R.H., Buzun,E., Terrazas,M.C., Hsu,C.Y., Oles,R., Ayala,A.V., Zhao,J., Chu,H., Kuijpers,M.C.M., Jackrel,S.L., Tugizimana,F., Nephali,L.P., Dubery,I.A., Madala,N.E., Moreira,E.A., Costa-Lotufo,L.V., Lopes,N.P., Rezende-Teixeira,P., Jimenez,P.C., Rimal,B., Patterson,A.D., Traxler,M.F., Pessotti,R.D.C., varado-Villalobos,D., Tamayo-Castillo,G., Chaverri,P., Escudero-Leyva,E., Quiros-Guerrero,L.M., Bory,A.J., Joubert,J., Rutz,A., Wolfender,J.L., Allard,P.M., Sichert,A., Pontrelli,S., Pullman,B.S., Bandeira,N., Gerwick,W.H., Gindro,K., Massana-Codina,J., Wagner,B.C., Forchhammer,K., Petras,D., Aiosa,N., Garg,N., Liebeke,M., Bourceau,P., Kang,K.B., Gadhavi,H., de Carvalho,L.P.S., Silva dos Santos,M., Perez-Lorente,A.I., Molina-Santiago,C., Romero,D., Franke,R., Bronstrup,M., Vera Ponce de Leon,A., Pope,P.B., La Rosa,S.L., La Barbera,G., Roager,H.M., Laursen,M.F., Hammerle,F., Siewert,B., Peintner,U., Licona-Cassani,C., Rodriguez-Orduna,L., Rampler,E., Hildebrand,F., Koellensperger,G., Schoeny,H., Hohenwallner,K., Panzenboeck,L., Gregor,R., O'Neill,E.C., Roxborough,E.T., Odoi,J., Bale,N.J., Ding,S., Sinninghe Damste,J.S., Guan,X.L., Cui,J.J., Ju,K.S., Silva,D.B., Silva,F.M.R., da Silva,G.F., Koolen,H.H.F., Grundmann,C., Clement,J.A., Mohimani,H., Broders,K., McPhail,K.L., Ober-Singleton,S.E., Rath,C.M., McDonald,D., Knight,R., Wang,M., Dorrestein,P.C. (2024). microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nature Microbiology,
9 (2),
336-345.
*
Artículo
22 - Gonzalez-Salazar,L.A., Quezada,M., Rodriguez-Orduna,L., Ramos-Aboites,H., Capon,R.J., Souza-Saldivar,V., Barona-Gomez,F., Licona-Cassani,C. (2023). Biosynthetic novelty index reveals the metabolic potential of rare actinobacteria isolated from highly oligotrophic sediments.
Microbial Genomics,
9 (1).
*
Artículo
23 - Mejia-Ponce,P.M., Ramos-Gonzalez,E.J., Ramos-Garcia,A.A., Lara-Ramirez,E.E., Soriano-Herrera,A.R., Medellin-Luna,M.F., Valdez-Salazar,F., Castro-Garay,C.Y., Nunez-Contreras,J.J., De Donato-Capote,M., Sharma,A., Castaneda-Delgado,J.E., Zenteno-Cuevas,R., Enciso-Moreno,J.A., Licona-Cassani,C. (2023). Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
PLoS ONE,
18 (10 October).
*
Artículo
24 - Morey-Leon,G., Mejia-Ponce,P.M., Granda Pardo,J.C., Munoz-Mawyin,K., Fernandez-Cadena,J.C., Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Berna,L. (2023). A precision overview of genomic resistance screening in Ecuadorian isolates of Mycobacterium tuberculosis using web-based bioinformatics tools.
PLoS ONE,
18 (12 December).
*
Artículo
25 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Renard,C.M.G.C., Contreras-Esquivel,J.C., Rodriguez-Rodriguez,J., Aguilar,O., Gonzalez-Valdez,J., Licona-Cassani,C. (2023). Physical characterization of genipin complexes coupled with multivariate data analysis to assess formed pigments.
Colloids and Surfaces A: Physicochemical and Engineering Aspects,
673,
131774.
*
Artículo
26 - Rodriguez-Sanchez,A.C., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Cumsille,A., Undabarrena,A., Camara,B., Selem-Mojica,N., Licona-Cassani,C. (2023). Phylogenetic classification of natural product biosynthetic gene clusters based on regulatory mechanisms.
Frontiers in Microbiology,
14.
*
Artículo
27 - Urrutia-Baca,V.H., Chuck-Hernandez,C., Gutierrez-Uribe,J., Ramos-Parra,P.A., Licona-Cassani,C. (2023). Development and validation of a versatile analytical method for absolute quantification of seven oligosaccharides in human, bovine, and goat milk.
Heliyon,
9 (11).
*
Artículo
28 - Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Madrazo-Moya,C.F., Cancino-Munoz,I., Montero,H., Licona-Cassani,C., Muniz-Salazar,R., Comas,I., Zenteno-Cuevas,R. (2022). SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance.
Genes,
13 (4).
*
Artículo
29 - Pineiro-Salvador,R., Vazquez-Garza,E., Cruz-Cardenas,J.A., Licona-Cassani,C., Garcia-Rivas,G., Moreno-Vasquez,J., Alcorta-Garcia,M.R., Lara-Diaz,V.J., Brunck,M.E.G. (2022). A cross-sectional study evidences regulations of leukocytes in the colostrum of mothers with obesity.
BMC Medicine,
20 (1).
*
Artículo
30 - Thenappan,D.P., Gonzalez-Salazar,L.A., Licona-Cassani,C., Kannepalli,A. (2022). Draft Genome Sequence of Streptomyces sp. Strain FB2, Isolated from Rice Rhizosphere.
Microbiology Resource Announcements,
11 (6).
*
Artículo
31 - Enriquez-Ochoa,D., Melendez-Martinez,D., Aguilar-Yanez,J.M., Licona-Cassani,C., Mayolo-Deloisa,K. (2021). Development of aqueous two-phase systems-based approaches for the selective recovery of metalloproteases and phospholipases A2 toxins from Crotalus molossus nigrescens venom.
Bioresources and Bioprocessing,
8 (1).
*
Artículo
32 - Flores-Gatica,M., Castaneda-Aponte,H., Gil-Garzon,M.R., Mora-Galvez,L.M., Banda-Magana,M.P., Jauregui-Jauregui,J.A., Torres-Acosta,M.A., Mayolo-Deloisa,K., Licona-Cassani,C. (2021). Primary recovery of hyaluronic acid produced in Streptococcus equi subsp. zooepidemicus using PEG?_"citrate aqueous two-phase systems.
AMB Express,
11 (1),
123.
*
Artículo
33 - Gamez-Valdez,J.S., Garcia-Mazcorro,J.F., Montoya-Rincon,A.H., Rodriguez-Reyes,D.L., Jimenez-Blanco,G., Alanis-Rodriguez,M.T., Perez-Cabeza de Vaca,R., Alcorta-Garcia,M.R., Brunck,M., Lara-Diaz,V.J., Licona-Cassani,C. (2021). Differential analysis of the bacterial community in colostrum samples from women with gestational diabetes mellitus and obesity.
Scientific Reports,
11 (1).
*
Artículo
34 - Jimenez-Ruano,A.C., Madrazo-Moya,C.F., Cancino-Munoz,I., Mejia-Ponce,P.M., Licona-Cassani,C., Comas,I., Muniz-Salazar,R., Zenteno-Cuevas,R. (2021). Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance.
Scientific Reports,
11 (1),
1870.
*
Artículo
35 - Maldonado-Arriaga,B., Sandoval-Jimenez,S., Rodriguez-Silverio,J., Alcaraz-Estrada,S.L., Cortes-Espinosa,T., Perez-Cabeza de Vaca,R., Licona-Cassani,C., Gomez-Valdez,J.S., Shaw,J., Mondragon-Teran,P., Hernandez-Cortez,C., Suarez-Cuenca,J.A., Castro-Escarpulli,G. (2021). Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis.
Microbiologyopen,
10 (2).
*
Artículo
36 - Torres-Acosta,M.A., Castaneda-Aponte,H.M., Mora-Galvez,L.M., Gil-Garzon,M.R., Banda-Magana,M.P., Marcellin,E., Mayolo-Deloisa,K., Licona-Cassani,C. (2021). Comparative Economic Analysis Between Endogenous and Recombinant Production of Hyaluronic Acid.
Frontiers in Bioengineering and Biotechnology,
9.
*
Revisión
37 - Avila-Rodriguez,M.I., Melendez-Martinez,D., Licona-Cassani,C., Aguilar-Yanez,J.M., Benavides,J., Sanchez,M.L. (2020). Practical context of enzymatic treatment for wound healing: A secreted protease approach (review).
Biomedical Reports,
13 (1),
3-14.
*
Artículo
38 - Gallegos-Lopez,S., Mejia-Ponce,P.M., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Souza-Saldivar,V., Licona-Cassani,C. (2020). Draft Genome Sequence of Streptomyces sp. Strain C8S0, isolated from a highly oligotrophic sediment.
Microbiology Resource Announcements,
9 (14).
*
Artículo
39 - Garcia-Mazcorro,J.F., Kawas,J.R., Licona-Cassani,C., Mertens-Talcott,S., Noratto,G. (2020). Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity.
PeerJ,
8.
*
Artículo
40 - Garza-Aguilar,S.M., Garcia-Salinas,C., Mejia-Ponce,P.M, Licona-Cassani,C, Ramos-Parra,P.A, Diaz de la Garza,R.I. (2020). The complexity of folate polyglutamylation in plants: Postharvest ripening and ethylene modulate polyglutamylated profiles in climacteric fruits plus systematic analysis of the glutamyl tail-editing enzymes.
Scientia Horticulturae,
273 (109588).
*
Artículo
41 - Melendez-Martinez,D., Plenge-Tellechea,L.F., Gatica-Colima,A., Cruz-Perez,M.S., Aguilar-Yanez,J.M., Licona-Cassani,C. (2020). Functional mining of the crotalus spp. venom protease repertoire reveals potential for chronic wound therapeutics.
Molecules,
25 (15).
*
Artículo
42 - Orellana,C.A., Zaragoza,N.E., Licona-Cassani,C., Palfreyman,R.W., Cowie,N., Moonen,G., Moutafis,G., Power,J., Nielsen,L.K., Marcellin,E. (2020). Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani.
Journal of Industrial Microbiology & Biotechnology,
47 (12),
1059-1073.
*
Artículo
43 - Khalil,Z.G., Cruz-Morales,P., Licona-Cassani,C., Marcellin,E., Capon,R.J. (2019). Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.
ISME Journal,
13 (1),
147-158.
*
Artículo
44 - Cruz-Morales,P., Ramos-Aboites,H.E., Licona-Cassani,C., Selem-Mojica,N., Mejia-Ponce,P.M., Souza-Saldivar,V., Barona-Gomez,F. (2017). Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.
FEMS Microbiology Ecology,
93 (9).
*
Artículo
45 - Quezada,M., Licona-Cassani,C., Cruz-Morales,P., Salim,A.A., Marcellin,E., Capon,R.J., Barona-Gomez,F. (2017). Diverse cone-snail species harbor closely related Streptomyces species with conserved chemical and genetic profiles, including polycyclic tetramic acid macrolactams.
Frontiers in Microbiology,
8 (NOV).
*
Artículo
46 - Steffani-Vallejo,J.L., Zuniga,C., Cruz-Morales,P., Lozano,L., Morales,M., Licona-Cassani,C., Revah,S., Utrilla,J. (2017). Draft genome sequence of sphingobacterium sp. CZ-UAM, isolated from a methanotrophic consortium.
Genome Announcements,
5 (33).
*
Artículo
47 - Licona-Cassani,C., Steen,J.A., Zaragoza,N.E., Moonen,G., Moutafis,G., Hodson,M.P., Power,J., Nielsen,L.K., Marcellin,E. (2016). Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.
41,
113-124.
*
Artículo
48 - Marcellin,E., Behrendorff,J.B., Nagaraju,S., Detissera,S., Segovia,S., Palfreyman,R.W., Daniell,J., Licona-Cassani,C., Quek,L.E., Speight,R., Hodson,M.P., Simpson,S.D., Mitchell,W.P., Kopke,M., Nielsen,L.K. (2016). Low carbon fuels and commodity chemicals from waste gases-systematic approach to understand energy metabolism in a model acetogen.
Green Chemistry,
18 (10),
3020-3028.
*
Artículo
49 - Tierrafria,V.H., Licona-Cassani,C., Maldonado-Carmona,N., Romero-Rodriguez,A., Centeno-Leija,S., Marcellin,E., Rodriguez-Sanoja,R., Ruiz-Villafan,B., Nielsen,L.K., Sanchez,S. (2016). Deletion of the hypothetical protein SCO2127 of Streptomyces coelicolor allowed identification of a new regulator of actinorhodin production.
Applied Microbiology and Biotechnology,
100 (21),
9229-9237 [Correction 104 (8) 3687].
*
Revisión
50 - Licona-Cassani,C., Cruz-Morales,P., Manteca,A., Barona-Gomez,F., Nielsen,L.K., Marcellin,E. (2015). Systems Biology Approaches to Understand Natural Products Biosynthesis.
Frontiers in Bioengineering and Biotechnology,
3.
*
Artículo
51 - Navone,L., Macagno,J.P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Gramajo,H., Rodriguez,E. (2015). AllR controls the expression of Streptomyces coelicolor allantoin pathway genes.
Applied and Environmental Microbiology,
81 (19),
6649-6659.
*
Artículo
52 - Liao,C., Rigali,S., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Ye,B.C. (2014). Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.
Microbiology (United Kingdom),
160 (9),
1914-1928.
*
Artículo
53 - Licona-Cassani,C., Lara,A.R., Cabrera-Valladares,N., Escalante,A., Hernandez-Chavez,G., Martinez,A., Bolivar,F., Gosset,G. (2014). Inactivation of Pyruvate Kinase or the Phosphoenolpyruvate: Sugar Phosphotransferase System Increases Shikimic and Dehydroshikimic Acid Yields from Glucose in Bacillus subtilis.
Journal of Molecular Microbiology and Biotechnology,
24 (1),
37-45.
Artículo
54 - Licona-Cassani,C., Lim,S., Marcellin,E., Nielsen,L.K. (2014). Temporal dynamics of the saccharopolyspora erythraea phosphoproteome.
Molecular and Cellular Proteomics,
13 (5),
1219-1230.
*
Artículo
55 - Navone,L., Casati,P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Rodriguez,E., Gramajo,H. (2014). Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.
Applied Microbiology and Biotechnology,
98 (1),
351-360.
*
Artículo
56 - Marcellin,E., Licona-Cassani,C., Mercer,T.R., Palfreyman,R.W., Nielsen,L.K. (2013). Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.
BMC Genomics,
14 (1).
*
Artículo
57 - Marcellin,E., Mercer,T.R., Licona-Cassani,C., Palfreyman,R.W., Dinger,M.E., Steen,J.A., Mattick,J.S., Nielsen,L.K. (2013). Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.
BMC Genomics,
14 (1).
*
Artículo
58 - Licona-Cassani,C., Marcellin,E., Quek,L.E., Jacob,S., Nielsen,L.K. (2012). Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.
Antonie Van Leeuwenhoek,
102 (3),
493-502.
*
Artículo
59 - Utrilla,J., Licona-Cassani,C., Marcellin,E., Gosset,G., Nielsen,L.K., Martinez,A. (2012). Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter.
Metabolic Engineering,
14 (5),
469-476.
Internacional
60 - Perez-Martinez,D., Mejia-Ponce,P., Licona-Cassani,C., de Igartua,E., Bermudez,G., Viveros,D., Zenteno-Cuevas,R. (2023). Drug Resistance in Tuberculosis: Mechanisms, Diagnosis, New Responses, and the Need for an Integrated Approach. Integrated Science.
331-359,
11.
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Preprint
61 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,Wilson I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N. (2025). Uncharacterized Acetilactobacillus -like genera represent the most abundant microorganisms in honeys produced by native stingless bee.
bioRxiv,
Preprint posted June 27.
*
Preprint
62 - Aguilar,C., Verdel-Aranda,K., Ramos-Aboites, H.E., Morales, M.A., Licona-Cassani,C., Barona-Gómez, F. (2020). Convergent evolution of Streptomyces protease inhibitors involving a tRNA-mediated condensation-minus NRPS.
bioRxiv,
Posted October 28.
Artículo
63 - Alvarado-Pena,N., Munoz-Torrico,M., Narvaez-Diaz,L., Mejia-Ponce,P.M, Becerril-Vargas,E., Zuniga,J., Muniz-Salazar,R., Laniado-Laborin,R., Licona-Cassani,C., Soberon,X., Silva-Herzog,E.. Mycobacterium tuberculosis genomic surveillance in Mexico. Characterization of variants in drug resistance and efflux pump genes.
Frontiers in Microbiology,
16,
1666838.
Artículo
64 - Elakkya,M., Gonzalez-Salazar,L.A., Lopez-Reyes,K., Rebelo-Romao,I., Sousa,A., Godde,V., Niehaus,K., Thenappan,D.P., Vilchez,J.I., Paul,S., Licona-Cassani,C.. Comparative genomics and metabolomics reveal phytohormone production, nutrient acquisition, and osmotic stress tolerance in Azotobacter chroococcum W5.
Frontiers in Microbiology,
16,
1626016.
Artículo
65 - Gallardo-Camarena,M.V., Reverchon,F., Mendez-Bravo,A., Torres-Acosta,M.A., Licona-Cassani,C.. Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.
AMB Express,
15 (1).
*
Artículo
66 - Gallardo-Camarena,M.V., Torres-Acosta,M.A., Licona-Cassani,C.. Economic evaluation of large-scale production for Colletotrichum antagonists as biocontrol agents against anthracnose.
Journal of Chemical Technology and Biotechnology,
100 (5),
1117-1128.
*
Artículo
67 - Morey-Leon,G., Mejia-Ponce,P.M., Fernandez-Cadena,J.C, Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Fresia,P, Berna,L. Global epidemiology of Mycobacterium tuberculosis lineage 4 insights from Ecuadorian genomic data.
Scientific Reports,
15 (1).
*
Artículo
68 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Gonzalez-Valdez,J., Aguilar,O., Renard,C.M.G.C., Licona-Cassani,C.. Influence of molar ratio and pH on physicochemical characteristics of genipin-derived pigments formed at cold and mild temperatures.
Food Chemistry Advances,
7,
100983.
*
Artículo
69 - Ramos-Garcia,A.A., Mejia-Ponce,P.M., Salem-Mojica,N., Santos-Diaz,A., Martinez-Ledesma,E., Licona-Cassani,C.. FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in Mycobacterium tuberculosis.
Bioinformatics,
41 (7),
btaf341.
Artículo
70 - Rodriguez-Orduna,L., Aguilar,C., Hernandez-Melgar,A.G., Arocha-Garza,H.F., Verdel-Aranda,K., Vazquez-Rodriguez,A., Lopez-Ribot,J.L., Moreno-Ulloa,A., Licona-Cassani,C.. Biodiscovery of Actinomycetota through metabolo-genomics reveals functional diversity across contrasting Mexican ecosystems.
Microbial Genomics,
11 (10),
001557.
Artículo
71 - Salazar-Garcia,L.M., Damas-Ramos,L.C., Trejo-Alarcon,L.M., Rago,D., Ahonen,L., Cruz-Morales,P., Ponce-Noyola,P., Licona-Cassani,C.. CRISPR-driven enhanced hydrocarbon emulsification in an environmental Pseudomonas aeruginosa strain.
Microbial Cell Factories,
24 (1),
151.
Artículo
72 - Trejo-Alarcon,L.M., Cano-Prieto,C., Calheiros de Carvalho,A., Rago,D., Ahonen,L., Cruz-Morales,P., Licona-Cassani,C.. Integrative metabolo-genomics suggests a biosynthetic pathway for tetrangulol in Streptomyces sp. KL110A.
World Journal of Microbiology & Biotechnology,
41 (3).
*
Artículo
73 - Trejo-Alarcon,L.M., Cruz-Morales,P., Licona-Cassani,C.. Draft genome sequence of Streptomyces sp. CC302I with non-canonical biosynthetic gene clusters for codon-readthrough activity.
Microbiology Resource Announcements,
14 (2).
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Artículo
74 - Zdouc,M.M., Blin,K., Louwen,N.L.L., Navarro,J., Loureiro,C., Bader,C.D., Bailey,C.B., Barra,L., Booth,T.J., Bozhuyuk,K.A.J., Cediel-Becerra,J.D.D., Charlop-Powers,Z., Chevrette,M.G., Chooi,Y.H., D'Agostino,P.M., de Rond T., Del Pup E., Duncan,K.R., Gu,W., Hanif,N., Helfrich,E.J.N., Jenner,M., Katsuyama,Y., Korenskaia,A., Krug,D., Libis,V., Lund,G.A., Mantri,S., Morgan,K.D., Owen,C., Phan,C.S., Philmus,B., Reitz,Z.L., Robinson,S.L., Singh,K.S., Teufel,R., Tong,Y., Tugizimana,F., Ulanova,D., Winter,J.M., Aguilar,C., Akiyama,D.Y., Al-Salihi,S.A.A., Alanjary,M., Alberti,F., Aleti,G., Alharthi,S.A., Rojo,M.Y.A., Arishi,A.A., Augustijn,H.E., Avalon,N.E., Avelar-Rivas,J.A., Axt,K.K., Barbieri,H.B., Barbosa,J.C.J., Barboza Segato,L.G., Barrett,S.E., Baunach,M., Beemelmanns,C., Beqaj,D., Berger,T., Bernaldo-Aguero,J., Bettenbuhl,S.M., Bielinski,V.A., Biermann,F., Borges,R.M., Borriss,R., Breitenbach,M., Bretscher,K.M., Brigham,M.W., Buedenbender,L., Bulcock,B.W., Cano-Prieto,C., Capela,J., Carrion,V.J., Carter,R.S., Castelo-Branco,R., Castro-Falcon,G., Chagas,F.O., Charria-Giron,E., Chaudhri,A.A., Chaudhry,V., Choi,H., Choi,Y., Choupannejad,R., Chromy,J., Donahey,M.S.C., Collemare,J., Connolly,J.A., Creamer,K.E., Crusemann,M., Cruz,A.A., Cumsille,A., Dallery,J.F., Damas-Ramos,L.C., Damiani,T., de Kruijff M., Martin,B.D., Sala,G.D., Dillen,J., Doering,D.T., Dommaraju,S.R., Durusu,S., Egbert,S., Ellerhorst,M., Faussurier,B., Fetter,A., Feuermann,M., Fewer,D.P., Foldi,J., Frediansyah,A., Garza,E.A., Gavriilidou,A., Gentile,A., Gerke,J., Gerstmans,H., Gomez-Escribano,J.P., Gonzalez-Salazar,L.A., Grayson,N.E., Greco,C., Gomez,J.E.G., Guerra,S., Flores,S.G., Gurevich,A., Gutierrez-Garcia,K., Hart,L., Haslinger,K., He,B., Hebra,T., Hemmann,J.L., Hindra,H., Hoing,L., Holland,D.C., Holme,J.E., Horch,T., Hrab,P., Hu,J., Huynh,T.H., Hwang,J.Y., Iacovelli,R., Iftime,D., Iorio,M., Jayachandran,S., Jeong,E., Jing,J., Jung,J.J., Kakumu,Y., Kalkreuter,E., Kang,K.B., Kang,S., Kim,W., Kim,G.J., Kim,H., Kim,H.U., Klapper,M., Koetsier,R.A., Kollten,C., Kovacs,A.T., Kriukova,Y., Kubach,N., Kunjapur,A.M., Kushnareva,A.K., Kust,A., Lamber,J., Larralde,M., Larsen,N.J., Launay,A.P., Le,N.T., Lebeer,S., Lee,B.T., Lee,K., Lev,K.L., Li,S.M., Li,Y.X., Licona-Cassani,C., Lien,A., Liu,J., Lopez,J.A.V., Machushynets,N.V., Macias,M.I., Mahmud,T., Maleckis,M., Martinez-Martinez,A.M., Mast,Y., Maximo,M.F., McBride,C.M., McLellan,R.M., Bhatt,K.M., Melkonian,C., Merrild,A., Metsa-Ketela,M., Mitchell,D.A., Muller,A.V., Nguyen,G.S., Nguyen,H.T., Niedermeyer,T.H.J., O'Hare,J.H., Ossowicki,A., Ostash,B.O., Otani,H., Padva,L., Paliyal,S., Pan,X., Panghal,M., Parade,D.S., Park,J., Parra,J., Rubio,M.P., Pham,H.T., Pidot,S.J., Piel,J., Pourmohsenin,B., Rakhmanov,M., Ramesh,S., Rasmussen,M.H., Rego,A., Reher,R., Rice,A.J., Rigolet,A., Romero-Otero,A., Rosas-Becerra,L.R., Rosiles,P.Y., Rutz,A., Ryu,B., Sahadeo,L.A., Saldanha,M., Salvi,L., Sanchez-Carvajal,E., Santos-Medellin,C., Sbaraini,N., Schoellhorn,S.M., Schumm,C., Sehnal,L., Selem,N., Shah,A.D., Shishido,T.K., Sieber,S., Silviani,V., Singh,G., Singh,H., Sokolova,N., Sonnenschein,E.C., Sosio,M., Sowa,S.T., Steffen,K., Stegmann,E., Streiff,A.B., Struder,A., Surup,F., Svenningsen,T., Sweeney,D., Szenei,J., Tagirdzhanov,A., Tan,B., Tarnowski,M.J.. MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Nucleic Acids Research,
53 (D1),
gkae1115,
D678-D690.
Preprint
75 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,Wilson I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N.. Uncharacterized Acetilactobacillus -like genera represent the most abundant microorganisms in honeys produced by native stingless bee.
bioRxiv,
Preprint posted June 27.
*
Artículo
76 - Aguilar,C., Alwali,A., Mair,M., Rodriguez-Orduna,L., Contreras-Peruyero,H., Modi,R., Roberts,C., Selem-Mojica,N., Licona-Cassani,C., Parkinson,E.I.. Actinomycetota bioprospecting from ore-forming environments.
Microbial Genomics,
10 (5),
001253.
*
Artículo
77 - Alwali,A.Y., Santos,D., Aguilar,C., Birch,A., Rodriguez-Ordunea,L., Roberts,C.B., Modi,R., Licona-Cassani,C., Parkinson,E.I.. Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin.
Journal of Industrial Microbiology & Biotechnology,
51,
kuae014.
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Artículo
78 - Bermudez-Hernandez,G.A., Perez-Martinez,D., Ortiz-Leon,M.C., Muniz-Salazar,R., Licona-Cassani,C., Zenteno-Cuevas,R.. Mutational Dynamics Related to Antibiotic Resistance in M. tuberculosis Isolates from Serial Samples of Patients with Tuberculosis and Type 2 Diabetes Mellitus.
Microorganisms,
12 (2).
*
Artículo
79 - Contreras-Peruyero,H., Guerrero-Flores,S., Zirion-Martinez,C., Mejia-Ponce,P.M., Navarro-Miranda,M., Lovaco-Flores,J.A., Ibarra-Rodriguez,J.M., Pashkov,A., Licona-Cassani,C., Selem-Mojica,N.. Meeting the challenge of genomic analysis: a collaboratively developed workshop for pangenomics and topological data analysis.
Bioinformatics Advances,
4 (1).
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Artículo
80 - Deantas-Jahn,C., Mendoza,S.N., Licona-Cassani,C., Orellana,C., Saa,P.A.. Metabolic modeling of Halomonas campaniensis improves polyhydroxybutyrate production under nitrogen limitation.
Applied Microbiology and Biotechnology,
108 (1),
310.
*
Artículo
81 - Lozano-Aguirre,L., Avitia,M., Lappe-Oliveras,P., Licona-Cassani,C., Cevallos,M.A., Le Borgne,S.. Draft genomes of four Kluyveromyces marxianus isolates retrieved from the elaboration process of henequen (Agave fourcroydes) mezcal.
Microbiology Resource Announcements,
13 (3).
*
Artículo
82 - Mejia-Ponce,P.M., Chimal-Munoz,M., Zenteno-Cuevas,R., Licona-Cassani,C.. Draft genome sequences of 12 Mycolicibacterium fortuitum isolates from human pulmonary infections in Veracruz, Mexico.
Microbiology Resource Announcements,
13 (4).
*
Artículo
83 - Rodriguez-Orduna,L., Lara-Diaz,V.J., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Licona-Cassani,C.. Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.
Microbiology Resource Announcements,
13 (9).
*
Artículo
84 - Zuffa,S., Schmid,R., Bauermeister,A., Gomes,P., Caraballo-Rodriguez,A.M., El Abiead,Y., Aron,A.T., Gentry,E.C., Zemlin,J., Meehan,M.J., Avalon,N.E., Cichewicz,R.H., Buzun,E., Terrazas,M.C., Hsu,C.Y., Oles,R., Ayala,A.V., Zhao,J., Chu,H., Kuijpers,M.C.M., Jackrel,S.L., Tugizimana,F., Nephali,L.P., Dubery,I.A., Madala,N.E., Moreira,E.A., Costa-Lotufo,L.V., Lopes,N.P., Rezende-Teixeira,P., Jimenez,P.C., Rimal,B., Patterson,A.D., Traxler,M.F., Pessotti,R.D.C., varado-Villalobos,D., Tamayo-Castillo,G., Chaverri,P., Escudero-Leyva,E., Quiros-Guerrero,L.M., Bory,A.J., Joubert,J., Rutz,A., Wolfender,J.L., Allard,P.M., Sichert,A., Pontrelli,S., Pullman,B.S., Bandeira,N., Gerwick,W.H., Gindro,K., Massana-Codina,J., Wagner,B.C., Forchhammer,K., Petras,D., Aiosa,N., Garg,N., Liebeke,M., Bourceau,P., Kang,K.B., Gadhavi,H., de Carvalho,L.P.S., Silva dos Santos,M., Perez-Lorente,A.I., Molina-Santiago,C., Romero,D., Franke,R., Bronstrup,M., Vera Ponce de Leon,A., Pope,P.B., La Rosa,S.L., La Barbera,G., Roager,H.M., Laursen,M.F., Hammerle,F., Siewert,B., Peintner,U., Licona-Cassani,C., Rodriguez-Orduna,L., Rampler,E., Hildebrand,F., Koellensperger,G., Schoeny,H., Hohenwallner,K., Panzenboeck,L., Gregor,R., O'Neill,E.C., Roxborough,E.T., Odoi,J., Bale,N.J., Ding,S., Sinninghe Damste,J.S., Guan,X.L., Cui,J.J., Ju,K.S., Silva,D.B., Silva,F.M.R., da Silva,G.F., Koolen,H.H.F., Grundmann,C., Clement,J.A., Mohimani,H., Broders,K., McPhail,K.L., Ober-Singleton,S.E., Rath,C.M., McDonald,D., Knight,R., Wang,M., Dorrestein,P.C.. microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nature Microbiology,
9 (2),
336-345.
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Artículo
85 - Gonzalez-Salazar,L.A., Quezada,M., Rodriguez-Orduna,L., Ramos-Aboites,H., Capon,R.J., Souza-Saldivar,V., Barona-Gomez,F., Licona-Cassani,C.. Biosynthetic novelty index reveals the metabolic potential of rare actinobacteria isolated from highly oligotrophic sediments.
Microbial Genomics,
9 (1).
*
Artículo
86 - Mejia-Ponce,P.M., Ramos-Gonzalez,E.J., Ramos-Garcia,A.A., Lara-Ramirez,E.E., Soriano-Herrera,A.R., Medellin-Luna,M.F., Valdez-Salazar,F., Castro-Garay,C.Y., Nunez-Contreras,J.J., De Donato-Capote,M., Sharma,A., Castaneda-Delgado,J.E., Zenteno-Cuevas,R., Enciso-Moreno,J.A., Licona-Cassani,C.. Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
PLoS ONE,
18 (10 October).
*
Artículo
87 - Morey-Leon,G., Mejia-Ponce,P.M., Granda Pardo,J.C., Munoz-Mawyin,K., Fernandez-Cadena,J.C., Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Berna,L.. A precision overview of genomic resistance screening in Ecuadorian isolates of Mycobacterium tuberculosis using web-based bioinformatics tools.
PLoS ONE,
18 (12 December).
*
Artículo
88 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Renard,C.M.G.C., Contreras-Esquivel,J.C., Rodriguez-Rodriguez,J., Aguilar,O., Gonzalez-Valdez,J., Licona-Cassani,C.. Physical characterization of genipin complexes coupled with multivariate data analysis to assess formed pigments.
Colloids and Surfaces A: Physicochemical and Engineering Aspects,
673,
131774.
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89 - Rodriguez-Sanchez,A.C., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Cumsille,A., Undabarrena,A., Camara,B., Selem-Mojica,N., Licona-Cassani,C.. Phylogenetic classification of natural product biosynthetic gene clusters based on regulatory mechanisms.
Frontiers in Microbiology,
14.
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90 - Urrutia-Baca,V.H., Chuck-Hernandez,C., Gutierrez-Uribe,J., Ramos-Parra,P.A., Licona-Cassani,C.. Development and validation of a versatile analytical method for absolute quantification of seven oligosaccharides in human, bovine, and goat milk.
Heliyon,
9 (11).
*
Internacional
91 - Perez-Martinez,D., Mejia-Ponce,P., Licona-Cassani,C., de Igartua,E., Bermudez,G., Viveros,D., Zenteno-Cuevas,R.. Drug Resistance in Tuberculosis: Mechanisms, Diagnosis, New Responses, and the Need for an Integrated Approach. Integrated Science.
331-359,
11.
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92 - Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Madrazo-Moya,C.F., Cancino-Munoz,I., Montero,H., Licona-Cassani,C., Muniz-Salazar,R., Comas,I., Zenteno-Cuevas,R.. SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance.
Genes,
13 (4).
*
Artículo
93 - Pineiro-Salvador,R., Vazquez-Garza,E., Cruz-Cardenas,J.A., Licona-Cassani,C., Garcia-Rivas,G., Moreno-Vasquez,J., Alcorta-Garcia,M.R., Lara-Diaz,V.J., Brunck,M.E.G.. A cross-sectional study evidences regulations of leukocytes in the colostrum of mothers with obesity.
BMC Medicine,
20 (1).
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Artículo
94 - Thenappan,D.P., Gonzalez-Salazar,L.A., Licona-Cassani,C., Kannepalli,A.. Draft Genome Sequence of Streptomyces sp. Strain FB2, Isolated from Rice Rhizosphere.
Microbiology Resource Announcements,
11 (6).
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Artículo
95 - Enriquez-Ochoa,D., Melendez-Martinez,D., Aguilar-Yanez,J.M., Licona-Cassani,C., Mayolo-Deloisa,K.. Development of aqueous two-phase systems-based approaches for the selective recovery of metalloproteases and phospholipases A2 toxins from Crotalus molossus nigrescens venom.
Bioresources and Bioprocessing,
8 (1).
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Artículo
96 - Flores-Gatica,M., Castaneda-Aponte,H., Gil-Garzon,M.R., Mora-Galvez,L.M., Banda-Magana,M.P., Jauregui-Jauregui,J.A., Torres-Acosta,M.A., Mayolo-Deloisa,K., Licona-Cassani,C.. Primary recovery of hyaluronic acid produced in Streptococcus equi subsp. zooepidemicus using PEG?_"citrate aqueous two-phase systems.
AMB Express,
11 (1),
123.
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Artículo
97 - Gamez-Valdez,J.S., Garcia-Mazcorro,J.F., Montoya-Rincon,A.H., Rodriguez-Reyes,D.L., Jimenez-Blanco,G., Alanis-Rodriguez,M.T., Perez-Cabeza de Vaca,R., Alcorta-Garcia,M.R., Brunck,M., Lara-Diaz,V.J., Licona-Cassani,C.. Differential analysis of the bacterial community in colostrum samples from women with gestational diabetes mellitus and obesity.
Scientific Reports,
11 (1).
*
Artículo
98 - Jimenez-Ruano,A.C., Madrazo-Moya,C.F., Cancino-Munoz,I., Mejia-Ponce,P.M., Licona-Cassani,C., Comas,I., Muniz-Salazar,R., Zenteno-Cuevas,R.. Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance.
Scientific Reports,
11 (1),
1870.
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99 - Maldonado-Arriaga,B., Sandoval-Jimenez,S., Rodriguez-Silverio,J., Alcaraz-Estrada,S.L., Cortes-Espinosa,T., Perez-Cabeza de Vaca,R., Licona-Cassani,C., Gomez-Valdez,J.S., Shaw,J., Mondragon-Teran,P., Hernandez-Cortez,C., Suarez-Cuenca,J.A., Castro-Escarpulli,G.. Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis.
Microbiologyopen,
10 (2).
*
Artículo
100 - Torres-Acosta,M.A., Castaneda-Aponte,H.M., Mora-Galvez,L.M., Gil-Garzon,M.R., Banda-Magana,M.P., Marcellin,E., Mayolo-Deloisa,K., Licona-Cassani,C.. Comparative Economic Analysis Between Endogenous and Recombinant Production of Hyaluronic Acid.
Frontiers in Bioengineering and Biotechnology,
9.
*
Revisión
101 - Avila-Rodriguez,M.I., Melendez-Martinez,D., Licona-Cassani,C., Aguilar-Yanez,J.M., Benavides,J., Sanchez,M.L.. Practical context of enzymatic treatment for wound healing: A secreted protease approach (review).
Biomedical Reports,
13 (1),
3-14.
*
Artículo
102 - Gallegos-Lopez,S., Mejia-Ponce,P.M., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Souza-Saldivar,V., Licona-Cassani,C.. Draft Genome Sequence of Streptomyces sp. Strain C8S0, isolated from a highly oligotrophic sediment.
Microbiology Resource Announcements,
9 (14).
*
Artículo
103 - Garcia-Mazcorro,J.F., Kawas,J.R., Licona-Cassani,C., Mertens-Talcott,S., Noratto,G.. Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity.
PeerJ,
8.
*
Artículo
104 - Garza-Aguilar,S.M., Garcia-Salinas,C., Mejia-Ponce,P.M, Licona-Cassani,C, Ramos-Parra,P.A, Diaz de la Garza,R.I.. The complexity of folate polyglutamylation in plants: Postharvest ripening and ethylene modulate polyglutamylated profiles in climacteric fruits plus systematic analysis of the glutamyl tail-editing enzymes.
Scientia Horticulturae,
273 (109588).
*
Artículo
105 - Melendez-Martinez,D., Plenge-Tellechea,L.F., Gatica-Colima,A., Cruz-Perez,M.S., Aguilar-Yanez,J.M., Licona-Cassani,C.. Functional mining of the crotalus spp. venom protease repertoire reveals potential for chronic wound therapeutics.
Molecules,
25 (15).
*
Artículo
106 - Orellana,C.A., Zaragoza,N.E., Licona-Cassani,C., Palfreyman,R.W., Cowie,N., Moonen,G., Moutafis,G., Power,J., Nielsen,L.K., Marcellin,E.. Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani.
Journal of Industrial Microbiology & Biotechnology,
47 (12),
1059-1073.
*
Preprint
107 - Aguilar,C., Verdel-Aranda,K., Ramos-Aboites, H.E., Morales, M.A., Licona-Cassani,C., Barona-Gómez, F.. Convergent evolution of Streptomyces protease inhibitors involving a tRNA-mediated condensation-minus NRPS.
bioRxiv,
Posted October 28.
Artículo
108 - Khalil,Z.G., Cruz-Morales,P., Licona-Cassani,C., Marcellin,E., Capon,R.J.. Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.
ISME Journal,
13 (1),
147-158.
*
Artículo
109 - Cruz-Morales,P., Ramos-Aboites,H.E., Licona-Cassani,C., Selem-Mojica,N., Mejia-Ponce,P.M., Souza-Saldivar,V., Barona-Gomez,F.. Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.
FEMS Microbiology Ecology,
93 (9).
*
Artículo
110 - Quezada,M., Licona-Cassani,C., Cruz-Morales,P., Salim,A.A., Marcellin,E., Capon,R.J., Barona-Gomez,F.. Diverse cone-snail species harbor closely related Streptomyces species with conserved chemical and genetic profiles, including polycyclic tetramic acid macrolactams.
Frontiers in Microbiology,
8 (NOV).
*
Artículo
111 - Steffani-Vallejo,J.L., Zuniga,C., Cruz-Morales,P., Lozano,L., Morales,M., Licona-Cassani,C., Revah,S., Utrilla,J.. Draft genome sequence of sphingobacterium sp. CZ-UAM, isolated from a methanotrophic consortium.
Genome Announcements,
5 (33).
*
Artículo
112 - Licona-Cassani,C., Steen,J.A., Zaragoza,N.E., Moonen,G., Moutafis,G., Hodson,M.P., Power,J., Nielsen,L.K., Marcellin,E.. Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.
41,
113-124.
*
Artículo
113 - Marcellin,E., Behrendorff,J.B., Nagaraju,S., Detissera,S., Segovia,S., Palfreyman,R.W., Daniell,J., Licona-Cassani,C., Quek,L.E., Speight,R., Hodson,M.P., Simpson,S.D., Mitchell,W.P., Kopke,M., Nielsen,L.K.. Low carbon fuels and commodity chemicals from waste gases-systematic approach to understand energy metabolism in a model acetogen.
Green Chemistry,
18 (10),
3020-3028.
*
Artículo
114 - Tierrafria,V.H., Licona-Cassani,C., Maldonado-Carmona,N., Romero-Rodriguez,A., Centeno-Leija,S., Marcellin,E., Rodriguez-Sanoja,R., Ruiz-Villafan,B., Nielsen,L.K., Sanchez,S.. Deletion of the hypothetical protein SCO2127 of Streptomyces coelicolor allowed identification of a new regulator of actinorhodin production.
Applied Microbiology and Biotechnology,
100 (21),
9229-9237 [Correction 104 (8) 3687].
*
Revisión
115 - Licona-Cassani,C., Cruz-Morales,P., Manteca,A., Barona-Gomez,F., Nielsen,L.K., Marcellin,E.. Systems Biology Approaches to Understand Natural Products Biosynthesis.
Frontiers in Bioengineering and Biotechnology,
3.
*
Artículo
116 - Navone,L., Macagno,J.P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Gramajo,H., Rodriguez,E.. AllR controls the expression of Streptomyces coelicolor allantoin pathway genes.
Applied and Environmental Microbiology,
81 (19),
6649-6659.
*
Artículo
117 - Liao,C., Rigali,S., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Ye,B.C.. Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.
Microbiology (United Kingdom),
160 (9),
1914-1928.
*
Artículo
118 - Licona-Cassani,C., Lara,A.R., Cabrera-Valladares,N., Escalante,A., Hernandez-Chavez,G., Martinez,A., Bolivar,F., Gosset,G.. Inactivation of Pyruvate Kinase or the Phosphoenolpyruvate: Sugar Phosphotransferase System Increases Shikimic and Dehydroshikimic Acid Yields from Glucose in Bacillus subtilis.
Journal of Molecular Microbiology and Biotechnology,
24 (1),
37-45.
Artículo
119 - Licona-Cassani,C., Lim,S., Marcellin,E., Nielsen,L.K.. Temporal dynamics of the saccharopolyspora erythraea phosphoproteome.
Molecular and Cellular Proteomics,
13 (5),
1219-1230.
*
Artículo
120 - Navone,L., Casati,P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Rodriguez,E., Gramajo,H.. Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.
Applied Microbiology and Biotechnology,
98 (1),
351-360.
*
Artículo
121 - Marcellin,E., Licona-Cassani,C., Mercer,T.R., Palfreyman,R.W., Nielsen,L.K.. Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.
BMC Genomics,
14 (1).
*
Artículo
122 - Marcellin,E., Mercer,T.R., Licona-Cassani,C., Palfreyman,R.W., Dinger,M.E., Steen,J.A., Mattick,J.S., Nielsen,L.K.. Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.
BMC Genomics,
14 (1).
*
Artículo
123 - Licona-Cassani,C., Marcellin,E., Quek,L.E., Jacob,S., Nielsen,L.K.. Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.
Antonie Van Leeuwenhoek,
102 (3),
493-502.
*
Artículo
124 - Utrilla,J., Licona-Cassani,C., Marcellin,E., Gosset,G., Nielsen,L.K., Martinez,A.. Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter.
Metabolic Engineering,
14 (5),
469-476.